Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G170.101 Capsicum annuum HOM05D007135 ORTHO05D008880 2.8e-42 174.9 88 100.0
Solyc01g110400.2 Solanum lycopersicum HOM05D007135 ORTHO05D008880 8.4e-31 136.7 92 77.2
Sopen01g052550 Solanum pennellii HOM05D007135 ORTHO05D008880 8.4e-31 136.7 92 77.2
Duzib132G0527 Durio zibethinus HOM05D007135 ORTHO05D008880 2.1e-26 122.1 92 70.7
FAN27G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 4.8e-26 120.9 93 66.7
RcHm_v2.0_Chr6g0267951 Rosa chinensis HOM05D007135 ORTHO05D008880 4.8e-26 120.9 95 66.3
TWI75G0424 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 4.8e-26 120.9 95 67.4
Cfa005113 Carpinus fangiana HOM05D007135 ORTHO05D008880 6.2e-26 120.6 88 69.3
Migut.B00173 Erythranthe guttata HOM05D007135 ORTHO05D008880 6.2e-26 120.6 88 68.2
CANSAT11G0395 Cannabis sativa HOM05D007135 ORTHO05D008880 1.4e-25 119.4 101 63.4
COL.COLO4_26047 Corchorus olitorius HOM05D007135 ORTHO05D008880 1.4e-25 119.4 93 67.7
FAN15G3517 Fragaria x ananassa HOM05D007135 ORTHO05D008880 1.8e-25 119.0 91 67.0
Gohir.D02G222000 Gossypium hirsutum HOM05D007135 ORTHO05D008880 3.1e-25 118.2 94 68.1
Prupe.8G083700 Prunus persica HOM05D007135 ORTHO05D008880 3.1e-25 118.2 102 62.7
Gorai.005G250000 Gossypium raimondii HOM05D007135 ORTHO05D008880 4.0e-25 117.9 94 68.1
QL11p046458 Quercus lobata HOM05D007135 ORTHO05D008880 5.3e-25 117.5 97 64.9
DCAR_003685 Daucus carota HOM05D007135 ORTHO05D008880 6.9e-25 117.1 96 65.6
unitig_60.g25867 Utricularia gibba HOM05D007135 ORTHO05D008880 6.9e-25 117.1 88 69.3
Nn5g29239 Nelumbo nucifera HOM05D007135 ORTHO05D008880 1.2e-24 116.3 84 72.6
FvH4_2g10470 Fragaria vesca HOM05D007135 ORTHO05D008880 1.5e-24 115.9 89 65.2
FAN24G2677 Fragaria x ananassa HOM05D007135 ORTHO05D008880 1.5e-24 115.9 89 65.2
MD10G1062900 Malus domestica HOM05D007135 ORTHO05D008880 1.5e-24 115.9 99 61.6
Haze_02238 Corylus avellana HOM05D007135 ORTHO05D008880 2.0e-24 115.5 89 68.5
Manes.11G081700 Manihot esculenta HOM05D007135 ORTHO05D008880 2.0e-24 115.5 87 70.1
Cc02_g16900 Coffea canephora HOM05D007135 ORTHO05D008880 2.6e-24 115.2 100 62.0
Duzib248G1605 Durio zibethinus HOM05D007135 ORTHO05D008880 2.6e-24 115.2 92 68.5
PGR142G3962 Punica granatum HOM05D007135 ORTHO05D008880 2.6e-24 115.2 94 62.8
Aqoxy2G03368 Aquilegia oxysepala HOM05D007135 ORTHO05D008880 3.4e-24 114.8 91 68.1
Cpa.g.sc150.16 Carica papaya HOM05D007135 ORTHO05D008880 3.4e-24 114.8 88 67.0
Manes.04G083200 Manihot esculenta HOM05D007135 ORTHO05D008880 3.4e-24 114.8 85 70.6
Potri.004G163100 Populus trichocarpa HOM05D007135 ORTHO05D008880 5.8e-24 114.0 92 64.1
Gohir.A13G090900 Gossypium hirsutum HOM05D007135 ORTHO05D008880 7.6e-24 113.6 94 66.0
Gorai.002G149200 Gossypium raimondii HOM05D007135 ORTHO05D008880 7.6e-24 113.6 91 64.8
Nitab4.5_0005266g0060 Nicotiana tabacum HOM05D007135 ORTHO05D008880 7.6e-24 113.6 87 71.3
CSS0018566 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 1.3e-23 112.8 84 71.4
MELO3C013419.2 Cucumis melo HOM05D007135 ORTHO05D008880 1.7e-23 112.5 90 64.4
Potri.009G124700 Populus trichocarpa HOM05D007135 ORTHO05D008880 2.2e-23 112.1 91 63.7
Thecc.02G074900 Theobroma cacao HOM05D007135 ORTHO05D008880 2.2e-23 112.1 89 66.3
SalBow6G3736 Salvia bowleyana HOM05D007135 ORTHO05D008880 6.5e-23 110.5 93 65.6
Atru.chr5.3145 Acer truncatum HOM05D007135 ORTHO05D008880 1.1e-22 109.8 91 62.6
Gohir.A03G200700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 1.1e-22 109.8 94 66.0
Nitab4.5_0005932g0010 Nicotiana tabacum HOM05D007135 ORTHO05D008880 2.5e-22 108.6 80 71.2
Sc08g0000910 Simmondsia chinensis HOM05D007135 ORTHO05D008880 2.5e-22 108.6 99 61.6
Medtr3g117570 Medicago truncatula HOM05D007135 ORTHO05D008880 4.2e-22 107.8 80 67.5
Sed0017056 Sechium edule HOM05D007135 ORTHO05D008880 4.2e-22 107.8 89 65.2
Aa31LG7G15200 Aethionema arabicum HOM05D007135 ORTHO05D008880 5.5e-22 107.5 97 63.9
A04p16070 Brassica napus HOM05D007135 ORTHO05D008880 5.5e-22 107.5 95 64.2
BraA04t17247Z Brassica rapa HOM05D007135 ORTHO05D008880 5.5e-22 107.5 95 64.2
Ciclev10029699m.g Citrus clementina HOM05D007135 ORTHO05D008880 5.5e-22 107.5 88 63.6
PSO675G0190 Papaver somniferum HOM05D007135 ORTHO05D008880 7.1e-22 107.1 88 63.6
ClCG02G004560 Citrullus lanatus HOM05D007135 ORTHO05D008880 1.2e-21 106.3 91 63.7
MD05G1055600 Malus domestica HOM05D007135 ORTHO05D008880 1.6e-21 105.9 95 57.9
PSO541G1924 Papaver somniferum HOM05D007135 ORTHO05D008880 1.6e-21 105.9 88 62.5
TPR.G32169 Trifolium pratense HOM05D007135 ORTHO05D008880 1.6e-21 105.9 62 77.4
CSS0017994 Camellia sinensis var. sinensis HOM05D007135 ORTHO05D008880 2.1e-21 105.5 87 65.5
MBI05_g16268_MAGBIO Magnolia biondii HOM05D007135 ORTHO05D008880 2.7e-21 105.1 84 64.3
AL4G10430 Arabidopsis lyrata HOM05D007135 ORTHO05D008880 4.6e-21 104.4 96 63.5
Thhalv10000391m.g Eutrema salsugineum HOM05D007135 ORTHO05D008880 4.6e-21 104.4 102 62.7
Gohir.D13G096700 Gossypium hirsutum HOM05D007135 ORTHO05D008880 4.6e-21 104.4 84 64.3
Lalb_Chr23g0265121 Lupinus albus HOM05D007135 ORTHO05D008880 4.6e-21 104.4 55 87.3
Lalb_Chr23g0265141 Lupinus albus HOM05D007135 ORTHO05D008880 4.6e-21 104.4 55 87.3
ATR0149G014 Amborella trichopoda HOM05D007135 ORTHO05D008880 6.1e-21 104.0 85 65.9
EL10Ac9g21635 Beta vulgaris HOM05D007135 ORTHO05D008880 6.1e-21 104.0 94 61.7
AT2G21290 Arabidopsis thaliana HOM05D007135 ORTHO05D008880 1.0e-20 103.2 102 61.8
BolC8t51729H Brassica oleracea HOM05D007135 ORTHO05D008880 1.0e-20 103.2 93 63.4
Phvul.009G002700 Phaseolus vulgaris HOM05D007135 ORTHO05D008880 1.0e-20 103.2 81 65.4
BcaC02g08801 Brassica carinata HOM05D007135 ORTHO05D008880 1.3e-20 102.8 93 62.4
BolC4t26651H Brassica oleracea HOM05D007135 ORTHO05D008880 1.3e-20 102.8 93 62.4
BcaB08g34980 Brassica carinata HOM05D007135 ORTHO05D008880 1.8e-20 102.4 85 68.2
Lj1g0005652 Lotus japonicus HOM05D007135 ORTHO05D008880 1.8e-20 102.4 55 87.3
C04p50530 Brassica napus HOM05D007135 ORTHO05D008880 2.3e-20 102.1 93 61.3
Ca_15331_v3 Cicer arietinum L. HOM05D007135 ORTHO05D008880 2.3e-20 102.1 88 60.2
SHI05613 Sapria himalayana HOM05D007135 ORTHO05D008880 2.3e-20 102.1 54 85.2
Sp4g00480 Schrenkiella parvula HOM05D007135 ORTHO05D008880 2.3e-20 102.1 102 61.8
CARHR112160 Cardamine hirsuta HOM05D007135 ORTHO05D008880 3.0e-20 101.7 102 59.8
BraA09t41224Z Brassica rapa HOM05D007135 ORTHO05D008880 3.9e-20 101.3 94 61.7
C08p41660 Brassica napus HOM05D007135 ORTHO05D008880 8.7e-20 100.1 93 61.3
Carub.0004s0033 Capsella rubella HOM05D007135 ORTHO05D008880 8.7e-20 100.1 102 60.8
Os09g0528100 Oryza sativa ssp. japonica HOM05D007135 ORTHO05D008880 1.1e-19 99.8 54 83.3
A09p58330 Brassica napus HOM05D007135 ORTHO05D008880 2.5e-19 98.6 93 62.4
ECA234G2991 Erigeron canadensis HOM05D007135 ORTHO05D008880 3.3e-19 98.2 54 85.2
GSVIVG01024170001 Vitis vinifera HOM05D007135 ORTHO05D008880 3.3e-19 98.2 74 70.3
Psat5g003840 Pisum sativum HOM05D007135 ORTHO05D008880 4.3e-19 97.8 84 61.9
AUR62010386 Chenopodium quinoa HOM05D007135 ORTHO05D008880 5.7e-19 97.4 94 56.4
AUR62016832 Chenopodium quinoa HOM05D007135 ORTHO05D008880 5.7e-19 97.4 94 56.4
Ah.01g018800 Amaranthus hybridus HOM05D007135 ORTHO05D008880 9.7e-19 96.7 93 57.0
vmacro17421 Vaccinium macrocarpon HOM05D007135 ORTHO05D008880 1.3e-18 96.3 77 66.2
BcaC07g41158 Brassica carinata HOM05D007135 ORTHO05D008880 6.3e-18 94.0 91 57.1
TWI79G1445 Tripterygium wilfordii HOM05D007135 ORTHO05D008880 8.2e-18 93.6 79 63.3
Peaxi162Scf00016g00015 Petunia axillaris HOM05D007135 ORTHO05D008880 3.1e-17 91.7 59 79.7
Rhsim05G0068200 Rhododendron simsii HOM05D007135 ORTHO05D008880 4.1e-17 91.3 79 64.6
TAR381G0296 Trochodendron aralioides HOM05D007135 ORTHO05D008880 6.9e-17 90.5 73 69.9
CiPaw.05G073400 Carya illinoinensis HOM05D007135 ORTHO05D008880 2.6e-16 88.6 75 62.7
Dinv26818 Davidia involucrata HOM05D000193 ORTHO05D000402 4.5e-16 87.8 81 59.3
Actinidia02247 Actinidia chinensis HOM05D007135 ORTHO05D008880 1.3e-15 86.3 103 51.5
HanXRQChr10g0294181 Helianthus annuus HOM05D007135 ORTHO05D008880 1.7e-15 85.9 76 59.2
Duzib052G0169 Durio zibethinus HOM05D007135 ORTHO05D008880 2.2e-15 85.5 76 60.5
THA.LOC104824791 Tarenaya hassleriana HOM05D007135 ORTHO05D008880 6.5e-15 84.0 83 59.0
Sabra09G0095700 Salix brachista HOM05D007135 ORTHO05D008880 3.2e-14 81.6 74 59.5
FAN20G0703 Fragaria x ananassa HOM05D007135 ORTHO05D008880 4.2e-14 81.3 76 55.3
Haze_08383 Corylus avellana HOM05D007135 ORTHO05D008880 2.7e-13 78.6 50 82.0
Glyma.04G007900 Glycine max HOM05D007135 ORTHO05D008880 4.6e-13 77.8 77 58.4
CsaV3_7G000400 Cucumis sativus L. HOM05D007135 ORTHO05D008880 6.1e-13 77.4 76 59.2
Glyma.06G007700 Glycine max HOM05D007135 ORTHO05D008880 6.1e-13 77.4 42 85.7
Sabra04G0109400 Salix brachista HOM05D007135 ORTHO05D008880 7.9e-13 77.0 77 53.2
Haze_15927 Corylus avellana HOM05D018783 ORTHO05D008880 1.4e-12 76.3 50 76.0
Lsat_1_v5_gn_4_67341 Lactuca sativa HOM05D007135 ORTHO05D008880 3.9e-12 74.7 82 52.4
HPP92_008881 Vanilla planifolia HOM05D007135 ORTHO05D008880 6.7e-12 73.9 76 48.7
Zm00001eb103340 Zea mays HOM05D007135 ORTHO05D008880 2.2e-10 68.9 53 60.4
RhsimUnG0003900 Rhododendron simsii HOM05D004431 ORTHO05D005053 2.0e-08 62.4 43 76.7
RhsimUnG0067300 Rhododendron simsii HOM05D004431 ORTHO05D005053 2.0e-08 62.4 43 76.7
Mapoly0090s0033 Marchantia polymorpha HOM05D007135 ORTHO05D008880 1.4e-06 56.2 61 49.2


User provided reference genes

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