Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1693.3 Capsicum annuum HOM05D000388 ORTHO05D004227 3.8e-41 171.0 83 100.0
AL2G21390 Arabidopsis lyrata HOM05D000388 ORTHO05D004227 1.8e-38 162.2 83 95.2
BolSC29t60457H Brassica oleracea HOM05D000388 ORTHO05D004227 1.8e-38 162.2 83 95.2
BraA06t25429Z Brassica rapa HOM05D000388 ORTHO05D004227 1.8e-38 162.2 83 95.2
BraSC151t45710Z Brassica rapa HOM05D000388 ORTHO05D004227 1.8e-38 162.2 83 95.2
BraSC179t45799Z Brassica rapa HOM05D000388 ORTHO05D004227 1.8e-38 162.2 83 95.2
HanXRQChr16g0522541 Helianthus annuus HOM05D000388 ORTHO05D004227 1.8e-38 162.2 83 95.2
Lalb_Chr23g0274721 Lupinus albus HOM05D000388 ORTHO05D004227 1.8e-38 162.2 83 95.2
Prupe.1G271000 Prunus persica HOM05D000388 ORTHO05D004227 1.8e-38 162.2 83 95.2
C04p63050 Brassica napus HOM05D000388 ORTHO05D004227 5.1e-38 160.6 83 94.0
Gohir.A10G100300 Gossypium hirsutum HOM05D000388 ORTHO05D004227 5.1e-38 160.6 83 94.0
Migut.D01425 Erythranthe guttata HOM05D000388 ORTHO05D004227 1.5e-37 159.1 83 94.0
Gohir.A07G163609 Gossypium hirsutum HOM05D000388 ORTHO05D004227 1.5e-37 159.1 83 94.0
HanXRQChr13g0413551 Helianthus annuus HOM05D000388 ORTHO05D004227 2.0e-37 158.7 81 95.1
Ciclev10004110m.g Citrus clementina HOM05D000388 ORTHO05D004227 2.5e-37 158.3 83 94.0
Ciclev10010876m.g Citrus clementina HOM05D000388 ORTHO05D004227 2.5e-37 158.3 83 94.0
Ciclev10027655m.g Citrus clementina HOM05D000388 ORTHO05D004227 2.5e-37 158.3 83 94.0
Ciclev10030468m.g Citrus clementina HOM05D000388 ORTHO05D004227 2.5e-37 158.3 83 94.0
BolC7t41724H Brassica oleracea HOM05D000388 ORTHO05D004227 3.3e-37 157.9 81 93.8
BolSC47t61105H Brassica oleracea HOM05D000388 ORTHO05D004227 4.3e-37 157.5 83 92.8
Lsat_1_v5_gn_5_105761 Lactuca sativa HOM05D000388 ORTHO05D004227 5.7e-37 157.1 80 95.0
Lsat_1_v5_gn_5_58041 Lactuca sativa HOM05D000388 ORTHO05D004227 5.7e-37 157.1 80 95.0
Glyma.09G178600 Glycine max HOM05D000388 ORTHO05D004227 4.8e-36 154.1 83 88.0
Peaxi162Scf00395g00715 Petunia axillaris HOM05D000388 ORTHO05D004227 8.2e-36 153.3 77 96.1
Hund27844 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.1e-35 152.9 78 93.6
Hund19306 Selenicereus undatus HOM05D000388 ORTHO05D004227 1.8e-35 152.1 77 94.8
Hund31434 Selenicereus undatus HOM05D000388 ORTHO05D004227 2.4e-35 151.8 78 93.6
Solyc00g500058.1 Solanum lycopersicum HOM05D000388 ORTHO05D004227 2.4e-35 151.8 78 93.6
Solyc00g500210.1 Solanum lycopersicum HOM05D000388 ORTHO05D004227 2.4e-35 151.8 78 93.6
BolSC49t61190H Brassica oleracea HOM05D000388 ORTHO05D004227 3.1e-35 151.4 84 91.7
ATCG00360 Arabidopsis thaliana HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
A06p23270 Brassica napus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
BNapus_Darmor_BZH_scaffold_253p00140 Brassica napus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
C09p29540 Brassica napus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
BolSC45t60867H Brassica oleracea HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
CARHR282020 Cardamine hirsuta HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Thhalv10011045m.g Eutrema salsugineum HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
HanXRQChr14g0430581 Helianthus annuus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hma1.2p1_0248F.1_g102150 Hydrangea macrophylla HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Medtr4g051210 Medicago truncatula HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund08563 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund18038 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund19311 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund24075 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund27448 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund27566 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund27604 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund27660 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund27703 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund27748 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund27759 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund27801 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund27912 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund28002 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund28023 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund28030 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund28054 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund28089 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund28096 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund28119 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund28135 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund28158 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund28166 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund28193 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund28204 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund28242 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund28284 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund28296 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund28340 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund28347 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund28357 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund28368 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund28381 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund28393 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund28409 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund28444 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund28551 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund28582 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund28622 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund28693 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund28727 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund29031 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund29057 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund29134 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund29411 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund29624 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund29675 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund29906 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund29948 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund30487 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund31284 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
Hund31288 Selenicereus undatus HOM05D000388 ORTHO05D004227 5.3e-35 150.6 76 94.7
VMungo1127G1446 Vigna mungo HOM05D000388 ORTHO05D000473 5.3e-35 150.6 76 94.7
LjContig00318g0022419 Lotus japonicus HOM05D000388 ORTHO05D004227 6.9e-35 150.2 76 93.4
Sed0002050 Sechium edule HOM05D000388 ORTHO05D004227 6.9e-35 150.2 79 91.1
Sed0019997 Sechium edule HOM05D000388 ORTHO05D004227 6.9e-35 150.2 79 91.1
Lj2P1239T175 Lonicera japonica HOM05D000388 ORTHO05D004227 9.1e-35 149.8 78 92.3
Lj2P1237T81 Lonicera japonica HOM05D000388 ORTHO05D004227 1.5e-34 149.1 76 93.4
Lj2P1238T36 Lonicera japonica HOM05D000388 ORTHO05D004227 1.5e-34 149.1 76 93.4
Lj2P1239T100 Lonicera japonica HOM05D000388 ORTHO05D004227 1.5e-34 149.1 76 93.4
QL93p0270_0008 Quercus lobata HOM05D000388 ORTHO05D004227 1.5e-34 149.1 79 91.1
MELO3C027351.2 Cucumis melo HOM05D000388 ORTHO05D004227 2.0e-34 148.7 76 93.4
Sed0007112 Sechium edule HOM05D000388 ORTHO05D004227 2.0e-34 148.7 77 92.2
Nn055s41933 Nelumbo nucifera HOM05D000388 ORTHO05D004227 2.6e-34 148.3 76 93.4
Hund15468 Selenicereus undatus HOM05D000388 ORTHO05D004227 3.4e-34 147.9 77 92.2
EL10As28g24250 Beta vulgaris HOM05D000388 ORTHO05D000473 5.9e-34 147.1 74 94.6
HanXRQChr02g0041451 Helianthus annuus HOM05D000388 ORTHO05D004227 5.9e-34 147.1 74 94.6
HanXRQChr02g0044971 Helianthus annuus HOM05D000388 ORTHO05D004227 5.9e-34 147.1 74 94.6
HanXRQChr07g0201031 Helianthus annuus HOM05D000388 ORTHO05D004227 5.9e-34 147.1 74 94.6
HanXRQChr08g0210281 Helianthus annuus HOM05D000388 ORTHO05D004227 5.9e-34 147.1 74 94.6
HanXRQChr10g0289191 Helianthus annuus HOM05D000388 ORTHO05D004227 5.9e-34 147.1 74 94.6
HanXRQChr11g0326711 Helianthus annuus HOM05D000388 ORTHO05D004227 5.9e-34 147.1 74 94.6
HanXRQChr14g0460931 Helianthus annuus HOM05D000388 ORTHO05D004227 5.9e-34 147.1 74 94.6
HanXRQCPg0579921 Helianthus annuus HOM05D000388 ORTHO05D000473 5.9e-34 147.1 74 94.6
Solyc00g500145.1 Solanum lycopersicum HOM05D000388 ORTHO05D004227 5.9e-34 147.1 76 92.1
EL10As20g24206 Beta vulgaris HOM05D000388 ORTHO05D004227 7.7e-34 146.7 76 92.1
LjContig00489g0010648 Lotus japonicus HOM05D000388 ORTHO05D004227 2.2e-33 145.2 77 92.2
HanXRQChr11g0332831 Helianthus annuus HOM05D000388 ORTHO05D004227 3.8e-33 144.4 76 92.1
BNapus_Darmor_BZH_scaffold_287p00050 Brassica napus HOM05D000388 ORTHO05D004227 6.5e-33 143.7 76 93.4
Ciclev10027634m.g Citrus clementina HOM05D000388 ORTHO05D004227 1.1e-32 142.9 70 97.1
Ciclev10030462m.g Citrus clementina HOM05D000388 ORTHO05D004227 1.1e-32 142.9 70 97.1
arahy.Tifrunner.gnm1.ann1.9ACV62 Arachis hypogaea HOM05D000388 ORTHO05D004227 5.5e-32 140.6 83 86.7
arahy.Tifrunner.gnm1.ann1.HC26ZW Arachis hypogaea HOM05D000388 ORTHO05D004227 5.5e-32 140.6 83 86.7
BraSC140t45579Z Brassica rapa HOM05D000388 ORTHO05D004227 8.8e-30 133.3 67 94.0
Sed0002396 Sechium edule HOM05D000388 ORTHO05D004227 9.7e-29 129.8 67 92.5
BolSC29t60580H Brassica oleracea HOM05D000388 ORTHO05D004227 1.7e-28 129.0 74 83.8
BolSC45t60945H Brassica oleracea HOM05D000388 ORTHO05D004227 1.7e-28 129.0 74 83.8
Potri.013G141700 Populus trichocarpa HOM05D000388 ORTHO05D004227 1.7e-28 129.0 83 79.5
BraSC25t45839Z Brassica rapa HOM05D000388 ORTHO05D004227 2.2e-28 128.6 85 77.6
Glyma.01G201600 Glycine max HOM05D000388 ORTHO05D004227 8.2e-28 126.7 76 84.2
GSVIVG01016018001 Vitis vinifera HOM05D000388 ORTHO05D004227 3.1e-27 124.8 63 93.7
Potri.003G065133 Populus trichocarpa HOM05D000388 ORTHO05D004227 7.0e-27 123.6 64 93.8
Solyc05g016130.3 Solanum lycopersicum HOM05D000388 ORTHO05D004227 3.5e-26 121.3 63 88.9
AL2G20760 Arabidopsis lyrata HOM05D000388 ORTHO05D004227 5.9e-26 120.6 76 78.9
DCAR_032485 Daucus carota HOM05D000388 ORTHO05D004227 5.9e-26 120.6 76 78.9
Gohir.A08G157400 Gossypium hirsutum HOM05D000388 ORTHO05D004227 5.9e-26 120.6 76 78.9
PSO548G0079 Papaver somniferum HOM05D000388 ORTHO05D004227 5.9e-26 120.6 76 78.9
PGR111G0128 Punica granatum HOM05D000388 ORTHO05D004227 5.9e-26 120.6 76 78.9
HanXRQChr11g0333581 Helianthus annuus HOM05D000388 ORTHO05D004227 2.2e-25 118.6 63 92.1
Sed0015902 Sechium edule HOM05D000388 ORTHO05D004227 8.5e-25 116.7 61 90.2
Gorai.011G148900 Gossypium raimondii HOM05D000388 ORTHO05D004227 1.5e-24 115.9 59 93.2
Phvul.001G146500 Phaseolus vulgaris HOM05D000388 ORTHO05D004227 5.5e-24 114.0 83 72.3
Gohir.D06G147066 Gossypium hirsutum HOM05D000388 ORTHO05D004227 1.6e-23 112.5 58 91.4
EL10Ac1g01463 Beta vulgaris HOM05D000388 ORTHO05D004227 2.1e-23 112.1 56 94.6
HanXRQChr04g0099361 Helianthus annuus HOM05D000388 ORTHO05D004227 3.6e-23 111.3 72 73.6
Nitab4.5_0010321g0020 Nicotiana tabacum HOM05D000388 ORTHO05D004227 4.7e-23 110.9 56 92.9
Gorai.010G171400 Gossypium raimondii HOM05D000388 ORTHO05D004227 6.1e-23 110.5 58 89.7
Lalb_Chr20g0115471 Lupinus albus HOM05D000388 ORTHO05D004227 1.4e-22 109.4 69 79.7
Oeu051131.1 Olea europaea HOM05D000388 ORTHO05D004227 4.0e-22 107.8 53 94.3
Oeu062832.1 Olea europaea HOM05D000388 ORTHO05D004227 8.8e-22 106.7 72 76.4
BolC9t56935H Brassica oleracea HOM05D000388 ORTHO05D004227 9.7e-21 103.2 50 98.0
CAN.G678.5 Capsicum annuum HOM05D000388 ORTHO05D004227 4.8e-20 100.9 54 92.6
RcHm_v2.0_Chr5g0077071 Rosa chinensis HOM05D000388 ORTHO05D004227 1.1e-19 99.8 68 73.5
Gohir.A06G120306 Gossypium hirsutum HOM05D000388 ORTHO05D004227 1.4e-19 99.4 52 92.3
BraSC25t45876Z Brassica rapa HOM05D000388 ORTHO05D004227 7.0e-19 97.1 46 97.8
Migut.D01351 Erythranthe guttata HOM05D000388 ORTHO05D004227 7.0e-19 97.1 67 73.1
MBI14_g12605_MAGBIO Magnolia biondii HOM05D000388 ORTHO05D004227 1.7e-17 92.4 59 74.6
Lsat_1_v5_gn_8_5941 Lactuca sativa HOM05D000388 ORTHO05D004227 2.2e-17 92.0 47 91.5
RcHm_v2.0_Chr5g0077061 Rosa chinensis HOM05D000388 ORTHO05D004227 3.8e-17 91.3 54 81.5
SMO086G0046 Selaginella moellendorffii HOM05D000388 ORTHO05D004227 5.0e-17 90.9 73 60.3
Solyc09g015320.3 Solanum lycopersicum HOM05D000388 ORTHO05D004227 6.5e-17 90.5 61 75.4
Lsat_1_v5_gn_8_77200 Lactuca sativa HOM05D000388 ORTHO05D004227 1.2e-15 86.3 74 62.2
Lalb_Chr15g0080681 Lupinus albus HOM05D000388 ORTHO05D004227 1.2e-15 86.3 40 100.0
Gohir.A03G019600 Gossypium hirsutum HOM05D000388 ORTHO05D004227 3.6e-15 84.7 41 97.6
Peaxi162Scf00284g01052 Petunia axillaris HOM05D000388 ORTHO05D004227 1.0e-14 83.2 50 82.0
Lsat_1_v5_gn_2_5581 Lactuca sativa HOM05D000388 ORTHO05D004227 4.0e-14 81.3 76 59.2
SEGI_24497 Sequoiadendron giganteum HOM05D000388 ORTHO05D004227 1.2e-13 79.7 76 56.6
Solyc09g015280.1 Solanum lycopersicum HOM05D000388 ORTHO05D004227 7.5e-13 77.0 42 85.7
GSVIVG01008500001 Vitis vinifera HOM05D000388 ORTHO05D004227 1.4e-11 72.8 53 67.9
SGA_v2.0_scaffold781G53593 Striga asiatica HOM05D000388 ORTHO05D009867 5.4e-11 70.9 36 91.7
Lsat_1_v5_gn_8_105481 Lactuca sativa HOM05D000388 ORTHO05D004227 2.2e-09 65.5 74 44.6
FAN07G1458 Fragaria x ananassa HOM05D000388 ORTHO05D004227 1.9e-08 62.4 37 78.4
Eucgr.J00123 Eucalyptus grandis HOM05D000388 ORTHO05D004227 4.7e-07 57.8 44 65.9


User provided reference genes

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