Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G169.4 Capsicum annuum HOM05D006817 ORTHO05D008603 1.1e-276 956.1 514 100.0
Solyc06g050210.3 Solanum lycopersicum HOM05D006817 ORTHO05D008603 9.9e-257 889.8 514 92.8
Sopen06g015650 Solanum pennellii HOM05D006817 ORTHO05D008603 1.3e-256 889.4 514 92.6
Nitab4.5_0011715g0010 Nicotiana tabacum HOM05D006817 ORTHO05D008603 7.6e-249 863.6 510 90.0
Peaxi162Scf00739g00017 Petunia axillaris HOM05D006817 ORTHO05D008603 2.3e-245 852.0 525 88.0
Actinidia00992 Actinidia chinensis HOM05D006817 ORTHO05D008603 5.0e-200 701.4 498 74.7
Migut.F00593 Erythranthe guttata HOM05D006817 ORTHO05D008603 7.2e-199 697.6 508 73.6
CSS0030257 Camellia sinensis var. sinensis HOM05D006817 ORTHO05D008603 1.6e-198 696.4 501 75.4
Oeu036532.1 Olea europaea HOM05D006817 ORTHO05D008603 4.7e-198 694.9 508 74.0
Thecc.10G176900 Theobroma cacao HOM05D006817 ORTHO05D008603 4.1e-194 681.8 501 73.3
PGR044G0301 Punica granatum HOM05D006817 ORTHO05D008603 1.6e-193 679.9 495 74.3
GSVIVG01032704001 Vitis vinifera HOM05D006817 ORTHO05D008603 2.0e-193 679.5 495 74.3
TAR623G0065 Trochodendron aralioides HOM05D006817 ORTHO05D008603 7.7e-193 677.6 498 73.7
Rhsim09G0184300 Rhododendron simsii HOM05D006817 ORTHO05D008603 1.3e-192 676.8 510 72.5
Cc02_g05530 Coffea canephora HOM05D006817 ORTHO05D008603 1.1e-191 673.7 511 72.6
Potri.019G048700 Populus trichocarpa HOM05D006817 ORTHO05D008603 2.5e-191 672.5 498 71.7
Gohir.A10G180300 Gossypium hirsutum HOM05D006817 ORTHO05D008603 1.2e-190 670.2 502 71.5
MSTRG.27274 Avicennia marina HOM05D006817 ORTHO05D008603 8.0e-190 667.5 493 72.6
Gorai.011G210100 Gossypium raimondii HOM05D006817 ORTHO05D008603 3.0e-189 665.6 502 70.9
Atru.chr12.157 Acer truncatum HOM05D006817 ORTHO05D008603 2.6e-188 662.5 500 72.2
Ciclev10031264m.g Citrus clementina HOM05D006817 ORTHO05D008603 7.5e-188 661.0 500 70.4
TWI09G1614 Tripterygium wilfordii HOM05D006817 ORTHO05D008603 1.2e-185 653.7 497 69.8
Eucgr.J00131 Eucalyptus grandis HOM05D006817 ORTHO05D008603 5.9e-185 651.4 499 71.9
Nn2g10348 Nelumbo nucifera HOM05D006817 ORTHO05D008603 2.9e-184 649.0 498 70.7
Aqoxy4G02362 Aquilegia oxysepala HOM05D006817 ORTHO05D008603 1.2e-182 643.7 498 70.9
vmacro09974 Vaccinium macrocarpon HOM05D006817 ORTHO05D008603 1.6e-182 643.3 504 70.8
Gohir.D10G187300 Gossypium hirsutum HOM05D006817 ORTHO05D008603 2.8e-182 642.5 502 69.1
COL.COLO4_10038 Corchorus olitorius HOM05D006817 ORTHO05D008603 5.2e-181 638.3 486 71.8
Prupe.2G261900 Prunus persica HOM05D006817 ORTHO05D008603 2.0e-180 636.3 496 70.4
Lsat_1_v5_gn_9_59361 Lactuca sativa HOM05D006817 ORTHO05D008603 9.8e-180 634.0 503 68.0
ECA232G4264 Erigeron canadensis HOM05D006817 ORTHO05D008603 1.9e-178 629.8 502 66.7
MD01G1164100 Malus domestica HOM05D006817 ORTHO05D008603 5.4e-178 628.2 494 69.4
TPR.G24539 Trifolium pratense HOM05D006817 ORTHO05D008603 1.2e-177 627.1 496 70.4
Lj5g0023407 Lotus japonicus HOM05D006817 ORTHO05D008603 1.6e-177 626.7 496 69.2
THA.LOC104816518 Tarenaya hassleriana HOM05D006817 ORTHO05D008603 3.9e-176 622.1 498 67.7
CsaV3_5G010750 Cucumis sativus L. HOM05D006817 ORTHO05D008603 1.9e-175 619.8 500 67.4
Glyma.19G067100 Glycine max HOM05D006817 ORTHO05D008603 1.9e-175 619.8 499 69.7
Medtr1g007630 Medicago truncatula HOM05D006817 ORTHO05D008603 2.5e-175 619.4 496 69.6
Sp6g37510 Schrenkiella parvula HOM05D006817 ORTHO05D008603 2.5e-175 619.4 508 66.1
Phvul.001G074700 Phaseolus vulgaris HOM05D006817 ORTHO05D008603 3.3e-175 619.0 495 69.7
ClCG07G004850 Citrullus lanatus HOM05D006817 ORTHO05D008603 4.3e-175 618.6 500 67.4
Sed0020006 Sechium edule HOM05D006817 ORTHO05D008603 5.6e-175 618.2 500 67.4
Thhalv10013352m.g Eutrema salsugineum HOM05D006817 ORTHO05D008603 9.5e-175 617.5 498 66.5
arahy.Tifrunner.gnm1.ann1.6QBV89 Arachis hypogaea HOM05D006817 ORTHO05D008603 1.2e-174 617.1 495 67.9
Psat6g035880 Pisum sativum HOM05D006817 ORTHO05D008603 1.6e-174 616.7 496 68.5
arahy.Tifrunner.gnm1.ann1.6ZT9VY Arachis hypogaea HOM05D006817 ORTHO05D008603 2.1e-174 616.3 495 67.9
MELO3C020113.2 Cucumis melo HOM05D006817 ORTHO05D008603 6.8e-173 611.3 503 66.8
PSO170G5674 Papaver somniferum HOM05D006817 ORTHO05D008603 7.5e-172 607.8 497 67.6
Dinv21831 Davidia involucrata HOM05D004766 ORTHO05D006159 9.8e-172 607.4 498 69.7
DCAR_014588 Daucus carota HOM05D006817 ORTHO05D008603 2.9e-171 605.9 500 67.6
BcaC06g32240 Brassica carinata HOM05D006817 ORTHO05D008603 3.7e-171 605.5 498 65.5
HanXRQChr15g0493791 Helianthus annuus HOM05D006817 ORTHO05D008603 3.7e-171 605.5 475 68.8
Manes.10G004900 Manihot esculenta HOM05D006817 ORTHO05D008603 8.3e-171 604.4 501 67.7
A10p30880 Brassica napus HOM05D006817 ORTHO05D008603 1.1e-170 604.0 498 65.9
EL10Ac2g04256 Beta vulgaris HOM05D006817 ORTHO05D008603 1.9e-170 603.2 508 65.2
Sc11g0005730 Simmondsia chinensis HOM05D006817 ORTHO05D008603 4.1e-170 602.1 489 66.1
C09p71390 Brassica napus HOM05D006817 ORTHO05D008603 1.2e-169 600.5 498 65.3
BolC9t59902H Brassica oleracea HOM05D006817 ORTHO05D008603 6.0e-169 598.2 503 65.0
BraA10t45133Z Brassica rapa HOM05D006817 ORTHO05D008603 7.8e-169 597.8 505 65.1
Cfa001223 Carpinus fangiana HOM05D006817 ORTHO05D008603 1.0e-168 597.4 442 74.4
Lalb_Chr22g0360921 Lupinus albus HOM05D006817 ORTHO05D008603 1.7e-168 596.7 493 67.7
Cpa.g.sc19.86 Carica papaya HOM05D006817 ORTHO05D008603 6.6e-168 594.7 492 66.3
Ah.16g104230 Amaranthus hybridus HOM05D006817 ORTHO05D008603 6.2e-166 588.2 523 62.3
MBI15_g27349_MAGBIO Magnolia biondii HOM05D006817 ORTHO05D008603 1.4e-165 587.0 560 61.4
ATR0681G057 Amborella trichopoda HOM05D006817 ORTHO05D008603 6.8e-165 584.7 491 66.2
Lj8A57G58 Lonicera japonica HOM05D006817 ORTHO05D008603 1.5e-164 583.6 404 77.7
CDE04G2280 Ceratophyllum demersum HOM05D006817 ORTHO05D008603 3.7e-163 578.9 495 63.6
QL08p064576 Quercus lobata HOM05D006817 ORTHO05D008603 4.9e-163 578.6 459 70.2
Haze_17339 Corylus avellana HOM05D006817 ORTHO05D008603 6.6e-160 568.2 478 67.2
PSO017G6024 Papaver somniferum HOM05D006817 ORTHO05D008603 1.1e-159 567.4 462 68.6
HPP92_019064 Vanilla planifolia HOM05D006817 ORTHO05D008603 7.3e-159 564.7 497 64.2
HanXRQChr08g0222561 Helianthus annuus HOM05D006817 ORTHO05D008603 2.8e-158 562.8 516 59.9
Os12g0112300 Oryza sativa ssp. japonica HOM05D006817 ORTHO05D008603 4.9e-155 552.0 494 62.1
FAN03G2834 Fragaria x ananassa HOM05D006817 ORTHO05D008603 1.9e-154 550.1 545 58.9
Zm00001eb406320 Zea mays HOM05D006817 ORTHO05D008603 3.5e-153 545.8 497 61.0
SGA_v2.0_scaffold44G16643 Striga asiatica HOM05D006817 ORTHO05D008603 1.0e-152 544.3 500 62.8
FAN01G1353 Fragaria x ananassa HOM05D006817 ORTHO05D008603 7.3e-151 538.1 456 66.4
AUR62003430 Chenopodium quinoa HOM05D006817 ORTHO05D008603 1.2e-148 530.8 530 57.9
FAN10G2384 Fragaria x ananassa HOM05D006817 ORTHO05D008603 2.6e-148 529.6 452 66.6
CANSAT56G1261 Cannabis sativa HOM05D006817 ORTHO05D008603 5.8e-148 528.5 465 64.1
CiPaw.02G198400 Carya illinoinensis HOM05D006817 ORTHO05D008603 9.9e-148 527.7 414 70.3
AUR62012358 Chenopodium quinoa HOM05D006817 ORTHO05D008603 2.7e-145 519.6 475 61.9
Sabra19G0058300 Salix brachista HOM05D000055 ORTHO05D000057 2.7e-145 519.6 471 61.8
Aa31LG11G6330 Aethionema arabicum HOM05D006817 ORTHO05D008603 1.4e-138 497.3 498 56.4
FvH4_7g25670 Fragaria vesca HOM05D006817 ORTHO05D008603 3.2e-138 496.1 433 64.0
CARHR207930 Cardamine hirsuta HOM05D006817 ORTHO05D008603 1.1e-127 461.1 351 67.2
AT5G05310 Arabidopsis thaliana HOM05D006817 ORTHO05D008603 2.7e-121 439.9 348 66.4
MD07G1231900 Malus domestica HOM05D006817 ORTHO05D008603 2.3e-120 436.8 364 67.0
Nitab4.5_0000109g0530 Nicotiana tabacum HOM05D006817 ORTHO05D008603 8.8e-104 381.7 247 84.2
AUR62031486 Chenopodium quinoa HOM05D006817 ORTHO05D008603 7.4e-103 378.6 509 49.5
unitig_46.g18743 Utricularia gibba HOM05D006817 ORTHO05D008603 5.0e-99 365.9 489 48.7
Pp3c22_2490 Physcomitrium patens HOM05D006817 ORTHO05D008603 1.2e-97 361.3 500 46.4
Ca_12776_v3 Cicer arietinum L. HOM05D006817 ORTHO05D008603 3.6e-97 359.8 326 62.9
Carub.0006s0424 Capsella rubella HOM05D006817 ORTHO05D008603 3.8e-91 339.7 296 62.2
RcHm_v2.0_Chr1g0371891 Rosa chinensis HOM05D006817 ORTHO05D008603 5.4e-85 319.3 256 68.4
VMungo0647G0362 Vigna mungo HOM05D006817 ORTHO05D008603 2.2e-70 270.8 254 61.8
SEGI_05100 Sequoiadendron giganteum HOM05D006817 ORTHO05D008603 2.9e-70 270.4 215 64.2
MD05G1328700 Malus domestica HOM05D006817 ORTHO05D008603 8.6e-67 258.8 248 61.7
RcHm_v2.0_Chr1g0371881 Rosa chinensis HOM05D006817 ORTHO05D008603 1.1e-61 241.9 160 78.1
VMungo0647G0650 Vigna mungo HOM05D006817 ORTHO05D008603 1.9e-58 231.1 207 62.3
MSTRG.24128 Avicennia marina HOM05D006817 ORTHO05D008603 5.6e-58 229.6 148 81.8
QL10p038395 Quercus lobata HOM05D006817 ORTHO05D008603 4.1e-53 213.4 181 66.3
MD07G1231800 Malus domestica HOM05D006817 ORTHO05D008603 2.3e-48 197.6 147 68.7
Oeu020109.1 Olea europaea HOM05D006817 ORTHO05D008603 7.1e-45 186.0 160 65.6
QL05p063879 Quercus lobata HOM05D006817 ORTHO05D008603 2.8e-41 174.1 171 62.0
SEGI_41528 Sequoiadendron giganteum HOM05D006817 ORTHO05D008603 7.1e-37 159.5 164 54.3
Cre08.g361000 Chlamydomonas reinhardtii HOM05D006817 ORTHO05D008603 3.9e-35 153.7 489 29.4
QL03p030054 Quercus lobata HOM05D006817 ORTHO05D008603 2.6e-31 141.0 95 83.2
QL06p040335 Quercus lobata HOM05D006817 ORTHO05D008603 8.4e-30 136.0 106 76.4
QL09p047975 Quercus lobata HOM05D000176 ORTHO05D000106 1.3e-27 128.6 106 73.6
FvH4_7g25690 Fragaria vesca HOM05D006817 ORTHO05D008603 1.8e-24 118.2 86 74.4
Hund15836 Selenicereus undatus HOM05D006817 ORTHO05D008603 4.5e-23 113.6 72 80.6
PGSC0003DMG400024308 Solanum tuberosum HOM05D006817 ORTHO05D008603 2.7e-20 104.4 59 84.7
QL10p065865 Quercus lobata HOM05D006817 ORTHO05D008603 6.0e-20 103.2 87 71.3
FAN06G4794 Fragaria x ananassa HOM05D006817 ORTHO05D008603 1.8e-19 101.7 77 70.1
Os11g0112900 Oryza sativa ssp. japonica HOM05D006817 ORTHO05D008603 2.3e-19 101.3 99 56.6
QL08p064573 Quercus lobata HOM05D006817 ORTHO05D008603 1.1e-16 92.4 63 71.4
FAN06G1140 Fragaria x ananassa HOM05D006817 ORTHO05D008603 2.0e-15 88.2 58 82.8
MD17G1183400 Malus domestica HOM05D006817 ORTHO05D008603 3.2e-13 80.9 57 75.4
Prupe.2G262300 Prunus persica HOM05D006817 ORTHO05D008603 6.3e-09 66.6 90 51.1


User provided reference genes

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