Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1688.3 Capsicum annuum HOM05D005146 ORTHO05D011342 1.5e-89 332.8 163 100.0
CAN.G397.63 Capsicum annuum HOM05D000051 ORTHO05D000015 7.2e-28 127.9 102 65.7
PGSC0003DMG400003775 Solanum tuberosum HOM05D005146 ORTHO05D006752 3.2e-23 112.5 119 52.9
CAN.G311.14 Capsicum annuum HOM05D005146 ORTHO05D006752 4.1e-23 112.1 119 52.1
Nitab4.5_0001540g0020 Nicotiana tabacum HOM05D005146 ORTHO05D006752 2.0e-22 109.8 119 52.1
Solyc04g081310.3 Solanum lycopersicum HOM05D005146 ORTHO05D006752 2.7e-22 109.4 119 52.1
Sopen04g034930 Solanum pennellii HOM05D005146 ORTHO05D006752 2.7e-22 109.4 119 52.1
Sc26g0004380 Simmondsia chinensis HOM05D005146 ORTHO05D006752 7.3e-20 101.3 121 46.3
Nitab4.5_0000692g0150 Nicotiana tabacum HOM05D000051 ORTHO05D000015 1.6e-19 100.1 84 63.1
FvH4_2g38650 Fragaria vesca HOM05D005146 ORTHO05D006752 3.6e-19 99.0 103 51.5
Carub.0007s0877 Capsella rubella HOM05D005146 ORTHO05D006752 6.1e-19 98.2 63 71.4
MELO3C011001.2 Cucumis melo HOM05D005146 ORTHO05D006752 6.1e-19 98.2 68 61.8
Sp7g29580 Schrenkiella parvula HOM05D005146 ORTHO05D006752 6.1e-19 98.2 63 71.4
CSS0007392 Camellia sinensis var. sinensis HOM05D005146 ORTHO05D006752 8.0e-19 97.8 75 62.7
CSS0032974 Camellia sinensis var. sinensis HOM05D005146 ORTHO05D006752 8.0e-19 97.8 75 62.7
FAN15G2679 Fragaria x ananassa HOM05D005146 ORTHO05D006752 1.0e-18 97.4 56 78.6
FAN27G1976 Fragaria x ananassa HOM05D005146 ORTHO05D006752 1.0e-18 97.4 56 76.8
HanXRQChr06g0183611 Helianthus annuus HOM05D005146 ORTHO05D006752 1.0e-18 97.4 56 78.6
Ah.08g209140 Amaranthus hybridus HOM05D005146 ORTHO05D006752 1.4e-18 97.1 103 50.5
Migut.N03153 Erythranthe guttata HOM05D005146 ORTHO05D006752 1.4e-18 97.1 104 51.9
FAN20G2808 Fragaria x ananassa HOM05D005146 ORTHO05D006752 1.4e-18 97.1 56 76.8
BcaNung05185 Brassica carinata HOM05D005146 ORTHO05D006752 1.8e-18 96.7 63 69.8
CARHR239690 Cardamine hirsuta HOM05D005146 ORTHO05D006752 1.8e-18 96.7 63 71.4
Lsat_1_v5_gn_2_8601 Lactuca sativa HOM05D005146 ORTHO05D006752 1.8e-18 96.7 56 78.6
Lsat_1_v5_gn_2_8681 Lactuca sativa HOM05D004999 ORTHO05D007513 1.8e-18 96.7 56 78.6
TWI56G0936 Tripterygium wilfordii HOM05D005146 ORTHO05D006752 1.8e-18 96.7 56 78.6
Aa31LG2G18510 Aethionema arabicum HOM05D005146 ORTHO05D006752 2.3e-18 96.3 63 69.8
BcaC09g51970 Brassica carinata HOM05D005146 ORTHO05D006752 2.3e-18 96.3 62 71.0
C01p07160 Brassica napus HOM05D005146 ORTHO05D006752 2.3e-18 96.3 62 71.0
BolC1t00708H Brassica oleracea HOM05D005146 ORTHO05D006752 2.3e-18 96.3 62 71.0
BraA01t00610Z Brassica rapa HOM05D005146 ORTHO05D006752 2.3e-18 96.3 62 71.0
ClCG08G014400 Citrullus lanatus HOM05D005146 ORTHO05D006752 2.3e-18 96.3 57 71.9
DCAR_009928 Daucus carota HOM05D005146 ORTHO05D006752 2.3e-18 96.3 56 78.6
Dinv31832 Davidia involucrata HOM05D005146 ORTHO05D006752 3.1e-18 95.9 56 80.4
Nn6g32362 Nelumbo nucifera HOM05D005146 ORTHO05D006752 3.1e-18 95.9 75 58.7
AL7G20220 Arabidopsis lyrata HOM05D005146 ORTHO05D006752 4.0e-18 95.5 63 69.8
AT4G31790 Arabidopsis thaliana HOM05D005146 ORTHO05D006752 4.0e-18 95.5 63 69.8
MBI09_g15694_MAGBIO Magnolia biondii HOM05D005146 ORTHO05D006752 4.0e-18 95.5 56 73.2
vmacro21720 Vaccinium macrocarpon HOM05D005146 ORTHO05D006752 4.0e-18 95.5 56 78.6
CsaV3_2G029420 Cucumis sativus L. HOM05D005146 ORTHO05D006752 5.2e-18 95.1 57 71.9
Thhalv10025950m.g Eutrema salsugineum HOM05D005146 ORTHO05D006752 5.2e-18 95.1 63 69.8
Lj4A797T60 Lonicera japonica HOM05D005146 ORTHO05D006752 5.2e-18 95.1 70 68.6
RcHm_v2.0_Chr6g0302671 Rosa chinensis HOM05D005146 ORTHO05D006752 5.2e-18 95.1 56 75.0
CAN.G530.7 Capsicum annuum HOM05D000051 ORTHO05D011342 6.8e-18 94.7 103 54.4
ECA238G2776 Erigeron canadensis HOM05D005146 ORTHO05D006752 6.8e-18 94.7 56 76.8
Sed0001191 Sechium edule HOM05D005146 ORTHO05D006752 6.8e-18 94.7 57 71.9
unitig_746.g26814 Utricularia gibba HOM05D005146 ORTHO05D006752 6.8e-18 94.7 67 64.2
Cc10_g01800 Coffea canephora HOM05D005146 ORTHO05D006752 8.9e-18 94.4 150 42.7
SGA_v2.0_scaffold12G05971 Striga asiatica HOM05D005146 ORTHO05D006752 8.9e-18 94.4 64 64.1
A01p06490 Brassica napus HOM05D005146 ORTHO05D006752 1.2e-17 94.0 62 69.4
Rhsim06G0022400 Rhododendron simsii HOM05D005146 ORTHO05D006752 1.2e-17 94.0 56 78.6
Haze_04102 Corylus avellana HOM05D005146 ORTHO05D006752 1.5e-17 93.6 56 73.2
Hma1.2p1_0638F.1_g193760 Hydrangea macrophylla HOM05D005146 ORTHO05D006752 1.5e-17 93.6 56 76.8
Lalb_Chr23g0266181 Lupinus albus HOM05D005146 ORTHO05D006752 1.5e-17 93.6 56 73.2
Prupe.1G367100 Prunus persica HOM05D005146 ORTHO05D006752 1.5e-17 93.6 56 73.2
Os03g0355800 Oryza sativa ssp. japonica HOM05D005146 ORTHO05D006752 2.0e-17 93.2 57 70.2
QL02p011373 Quercus lobata HOM05D005146 ORTHO05D006752 2.6e-17 92.8 56 73.2
PGR083G0855 Punica granatum HOM05D005146 ORTHO05D006752 3.4e-17 92.4 62 67.7
Duzib150G0501 Durio zibethinus HOM05D005146 ORTHO05D006752 4.4e-17 92.0 63 68.3
Duzib170G0783 Durio zibethinus HOM05D005146 ORTHO05D006752 4.4e-17 92.0 89 51.7
MD15G1013600 Malus domestica HOM05D005146 ORTHO05D006752 4.4e-17 92.0 56 71.4
Thecc.09G245400 Theobroma cacao HOM05D005146 ORTHO05D006752 4.4e-17 92.0 103 46.6
Gohir.D08G020900 Gossypium hirsutum HOM05D005146 ORTHO05D006752 5.8e-17 91.7 63 66.7
Gorai.004G015300 Gossypium raimondii HOM05D005146 ORTHO05D006752 5.8e-17 91.7 63 66.7
RcHm_v2.0_Chr7g0221331 Rosa chinensis HOM05D005146 ORTHO05D006752 5.8e-17 91.7 75 60.0
SalBow3G2629 Salvia bowleyana HOM05D005146 ORTHO05D006752 5.8e-17 91.7 60 66.7
GSVIVG01009887001 Vitis vinifera HOM05D005146 ORTHO05D006752 5.8e-17 91.7 54 77.8
Gohir.A08G010500 Gossypium hirsutum HOM05D005146 ORTHO05D006752 7.5e-17 91.3 63 66.7
Atru.chr13.312 Acer truncatum HOM05D005146 ORTHO05D006752 9.8e-17 90.9 56 73.2
Actinidia15413 Actinidia chinensis HOM05D005146 ORTHO05D006752 9.8e-17 90.9 103 49.5
AUR62036170 Chenopodium quinoa HOM05D005146 ORTHO05D006752 9.8e-17 90.9 110 44.5
Cpa.g.sc1059.3 Carica papaya HOM05D005146 ORTHO05D006752 1.3e-16 90.5 56 73.2
CDE05G1835 Ceratophyllum demersum HOM05D005146 ORTHO05D006752 1.3e-16 90.5 56 73.2
MD08G1014100 Malus domestica HOM05D005146 ORTHO05D006752 1.3e-16 90.5 56 69.6
PSO170G4907 Papaver somniferum HOM05D005146 ORTHO05D006752 1.3e-16 90.5 56 73.2
PSO700G0287 Papaver somniferum HOM05D005146 ORTHO05D006752 1.3e-16 90.5 56 73.2
BcaC04g20385 Brassica carinata HOM05D005146 ORTHO05D006752 1.7e-16 90.1 63 65.1
BcaC04g20389 Brassica carinata HOM05D005146 ORTHO05D006752 1.7e-16 90.1 63 65.1
C09p44220 Brassica napus HOM05D005146 ORTHO05D006752 1.7e-16 90.1 63 65.1
BolC9t57294H Brassica oleracea HOM05D005146 ORTHO05D006752 1.7e-16 90.1 63 65.1
Cfa006669 Carpinus fangiana HOM05D005146 ORTHO05D006752 1.7e-16 90.1 56 71.4
Hund05199 Selenicereus undatus HOM05D005146 ORTHO05D006752 1.7e-16 90.1 104 47.1
ATR0797G002 Amborella trichopoda HOM05D005146 ORTHO05D006752 2.9e-16 89.4 56 71.4
Manes.05G148600 Manihot esculenta HOM05D005146 ORTHO05D006752 2.9e-16 89.4 55 72.7
Manes.11G065850 Manihot esculenta HOM05D005146 ORTHO05D006752 2.9e-16 89.4 55 72.7
Phvul.001G002400 Phaseolus vulgaris HOM05D005146 ORTHO05D006752 2.9e-16 89.4 56 71.4
Zm00001eb017150 Zea mays HOM05D005146 ORTHO05D006752 2.9e-16 89.4 56 69.6
MSTRG.25237 Avicennia marina HOM05D005146 ORTHO05D006752 3.7e-16 89.0 103 45.6
AUR62019460 Chenopodium quinoa HOM05D005146 ORTHO05D006752 3.7e-16 89.0 65 61.5
Eucgr.F01641 Eucalyptus grandis HOM05D005146 ORTHO05D006752 3.7e-16 89.0 58 69.0
Lj5g0000481 Lotus japonicus HOM05D005146 ORTHO05D006752 3.7e-16 89.0 103 46.6
Ciclev10002090m.g Citrus clementina HOM05D005146 ORTHO05D006752 4.9e-16 88.6 57 68.4
Peaxi162Scf00853g00215 Petunia axillaris HOM05D000051 ORTHO05D011342 6.4e-16 88.2 84 56.0
C08p13630 Brassica napus HOM05D005146 ORTHO05D006752 8.3e-16 87.8 63 63.5
BolC8t49001H Brassica oleracea HOM05D005146 ORTHO05D006752 8.3e-16 87.8 63 63.5
CiPaw.07G151400 Carya illinoinensis HOM05D005146 ORTHO05D006752 8.3e-16 87.8 56 69.6
Ca_14210_v3 Cicer arietinum L. HOM05D005146 ORTHO05D006752 8.3e-16 87.8 56 69.6
Sabra02G0019300 Salix brachista HOM05D005146 ORTHO05D006752 8.3e-16 87.8 54 74.1
TPR.G34539 Trifolium pratense HOM05D005146 ORTHO05D006752 8.3e-16 87.8 56 69.6
Aqoxy6G00492 Aquilegia oxysepala HOM05D005146 ORTHO05D006752 1.1e-15 87.4 103 45.6
Potri.002G023700 Populus trichocarpa HOM05D005146 ORTHO05D006752 1.1e-15 87.4 54 72.2
arahy.Tifrunner.gnm1.ann1.DQ6KFY Arachis hypogaea HOM05D005146 ORTHO05D006752 1.4e-15 87.0 102 47.1
arahy.Tifrunner.gnm1.ann1.VN499F Arachis hypogaea HOM05D005146 ORTHO05D006752 1.4e-15 87.0 102 47.1
Oeu039057.1 Olea europaea HOM05D005146 ORTHO05D006752 1.4e-15 87.0 56 67.9
THA.LOC104825772 Tarenaya hassleriana HOM05D005146 ORTHO05D006752 1.4e-15 87.0 57 68.4
Aqoxy5G01768 Aquilegia oxysepala HOM05D005146 ORTHO05D006752 1.9e-15 86.7 57 68.4
CANSAT11G0704 Cannabis sativa HOM05D005146 ORTHO05D006752 1.9e-15 86.7 57 66.7
Solyc09g009920.1 Solanum lycopersicum HOM05D000051 ORTHO05D000015 1.9e-15 86.7 85 55.3
Sopen09g004670 Solanum pennellii HOM05D000051 ORTHO05D011342 2.4e-15 86.3 85 55.3
Lj1g0002754 Lotus japonicus HOM05D005146 ORTHO05D006752 4.1e-15 85.5 56 67.9
arahy.Tifrunner.gnm1.ann1.RM6BI2 Arachis hypogaea HOM05D005146 ORTHO05D006752 5.4e-15 85.1 105 46.7
EL10Ac6g13895 Beta vulgaris HOM05D005146 ORTHO05D006752 5.4e-15 85.1 104 50.0
Medtr3g113750 Medicago truncatula HOM05D005146 ORTHO05D006752 5.4e-15 85.1 56 67.9
VMungo0251G0853 Vigna mungo HOM05D005146 ORTHO05D006752 5.4e-15 85.1 56 67.9
Psat5g013440 Pisum sativum HOM05D005146 ORTHO05D006752 7.0e-15 84.7 56 67.9
C08p46100 Brassica napus HOM05D005146 ORTHO05D032927 9.2e-15 84.3 62 61.3
BolC8t52160H Brassica oleracea HOM05D005146 ORTHO05D032927 9.2e-15 84.3 118 40.7
Glyma.20G014100 Glycine max HOM05D005146 ORTHO05D006752 9.2e-15 84.3 56 69.6
HPP92_026026 Vanilla planifolia HOM05D005146 ORTHO05D006752 9.2e-15 84.3 56 66.1
HPP92_027733 Vanilla planifolia HOM05D005146 ORTHO05D006752 9.2e-15 84.3 56 66.1
Glyma.07G217500 Glycine max HOM05D005146 ORTHO05D006752 1.6e-14 83.6 56 66.1
arahy.Tifrunner.gnm1.ann1.NX94TN Arachis hypogaea HOM05D005146 ORTHO05D006752 2.0e-14 83.2 105 45.7
BcaC07g41610 Brassica carinata HOM05D005146 ORTHO05D032927 2.7e-14 82.8 62 59.7
Peaxi162Scf00404g00219 Petunia axillaris HOM05D000051 ORTHO05D011342 2.7e-14 82.8 71 60.6
PGSC0003DMG400008873 Solanum tuberosum HOM05D000051 ORTHO05D011342 3.5e-14 82.4 81 54.3
PGSC0003DMG400008874 Solanum tuberosum HOM05D000051 ORTHO05D011342 1.0e-13 80.9 81 53.1
Nitab4.5_0004837g0050 Nicotiana tabacum HOM05D000051 ORTHO05D000015 1.3e-13 80.5 86 51.2
Peaxi162Scf00853g00318 Petunia axillaris HOM05D000051 ORTHO05D000015 1.7e-13 80.1 75 57.3
AagrBONN_evm.TU.Sc2ySwM_117.1420 Anthoceros agrestis HOM05D005146 ORTHO05D006752 3.0e-13 79.3 54 61.1
Oeu020876.1 Olea europaea HOM05D005146 ORTHO05D006752 3.0e-13 79.3 49 69.4
TAR628G0140 Trochodendron aralioides HOM05D005146 ORTHO05D006752 3.0e-13 79.3 48 75.0
Pp3c25_4490 Physcomitrium patens HOM05D005146 ORTHO05D006752 8.6e-13 77.8 58 58.6
AagrBONN_evm.TU.Sc2ySwM_368.2751 Anthoceros agrestis HOM05D005146 ORTHO05D006752 1.1e-12 77.4 60 55.0
CSS0002428 Camellia sinensis var. sinensis HOM05D005146 ORTHO05D006752 1.1e-12 77.4 73 52.1
Peaxi162Scf00853g00214 Petunia axillaris HOM05D000051 ORTHO05D000015 7.3e-12 74.7 74 55.4
Mapoly0107s0028 Marchantia polymorpha HOM05D005146 ORTHO05D006752 8.0e-11 71.2 57 56.1
SMO146G0393 Selaginella moellendorffii HOM05D005146 ORTHO05D006752 8.0e-11 71.2 58 51.7
COL.COLO4_37538 Corchorus olitorius HOM05D005146 ORTHO05D006752 3.1e-10 69.3 51 62.7
BcaC04g20387 Brassica carinata HOM05D005146 ORTHO05D006752 5.2e-10 68.6 86 44.2
CBR_g41468 Chara braunii HOM05D005146 ORTHO05D006752 1.5e-09 67.0 53 52.8
Cre05.g233300 Chlamydomonas reinhardtii HOM05D005146 ORTHO05D006752 5.8e-09 65.1 55 49.1
CSS0032399 Camellia sinensis var. sinensis HOM05D005146 ORTHO05D006752 1.9e-07 60.1 57 52.6
Lsat_1_v5_gn_2_8581 Lactuca sativa HOM05D000202 ORTHO05D000117 1.9e-07 60.1 39 71.8
PRCOL_00004436 Prasinoderma coloniale HOM05D005146 ORTHO05D006752 1.9e-07 60.1 57 47.4
CAN.G219.69 Capsicum annuum HOM05D000051 ORTHO05D000015 4.1e-07 58.9 62 53.2
PGSC0003DMG400031165 Solanum tuberosum HOM05D000051 ORTHO05D011342 4.1e-07 58.9 74 47.3
Peaxi162Scf00438g00626 Petunia axillaris HOM05D005146 ORTHO05D006752 1.2e-06 57.4 40 70.0
Lsat_1_v5_gn_2_8661 Lactuca sativa HOM05D000202 ORTHO05D000117 1.6e-06 57.0 39 69.2
MCO08G273 Micromonas commoda HOM05D005146 ORTHO05D006752 1.6e-06 57.0 56 35.7
Actinidia16979 Actinidia chinensis HOM05D005146 ORTHO05D006752 3.5e-06 55.8 37 73.0
Haze_26822 Corylus avellana HOM05D005146 ORTHO05D006752 3.5e-06 55.8 81 35.8


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