Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1683.2 Capsicum annuum HOM05D000007 ORTHO05D000017 5.0e-106 387.9 210 100.0
CAN.G473.149 Capsicum annuum HOM05D000007 ORTHO05D000017 9.9e-54 214.2 165 66.7
CAN.G473.137 Capsicum annuum HOM05D000007 ORTHO05D000017 7.6e-38 161.4 207 46.4
Solyc02g094080.1 Solanum lycopersicum HOM05D000007 ORTHO05D000017 7.1e-28 128.3 214 39.7
Nitab4.5_0000053g0050 Nicotiana tabacum HOM05D000530 ORTHO05D000017 1.2e-27 127.5 205 40.0
Nitab4.5_0002050g0190 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.6e-27 127.1 204 41.2
PGSC0003DMG400042854 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.3e-26 124.0 212 39.6
Sopen01g047470 Solanum pennellii HOM05D000007 ORTHO05D000017 1.8e-26 123.6 222 35.1
Nitab4.5_0000519g0140 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.4e-23 114.0 206 37.9
Nitab4.5_0000519g0240 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.2e-21 106.7 175 40.6
CAN.G1799.4 Capsicum annuum HOM05D000007 ORTHO05D000017 1.1e-20 104.4 203 37.4
CAN.G1799.7 Capsicum annuum HOM05D000007 ORTHO05D000017 6.1e-19 98.6 203 36.0
CAN.G473.136 Capsicum annuum HOM05D000007 ORTHO05D000017 6.7e-18 95.1 119 48.7
Nitab4.5_0002050g0180 Nicotiana tabacum HOM05D000007 ORTHO05D000017 6.3e-16 88.6 232 32.8
Solyc02g091570.1 Solanum lycopersicum HOM05D000007 ORTHO05D000017 1.1e-15 87.8 200 32.5
CAN.G696.5 Capsicum annuum HOM05D001580 ORTHO05D000017 1.4e-15 87.4 181 34.3
PGSC0003DMG400040733 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.4e-15 86.7 203 34.5
CAN.G575.77 Capsicum annuum HOM05D000007 ORTHO05D000017 2.0e-14 83.6 187 34.8
Nitab4.5_0000437g0110 Nicotiana tabacum HOM05D000007 ORTHO05D000017 4.5e-14 82.4 169 35.5
CAN.G575.102 Capsicum annuum HOM05D000007 ORTHO05D000017 5.9e-14 82.0 153 36.6
PGSC0003DMG400004721 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.0e-13 81.3 190 34.2
PGSC0003DMG400010705 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.7e-13 80.5 198 29.3
CAN.G575.76 Capsicum annuum HOM05D000007 ORTHO05D000017 3.8e-13 79.3 168 35.1
CAN.G575.119 Capsicum annuum HOM05D000007 ORTHO05D000017 8.5e-13 78.2 148 37.2
CAN.G575.137 Capsicum annuum HOM05D000007 ORTHO05D000017 8.5e-13 78.2 146 37.7
CAN.G1375.11 Capsicum annuum HOM05D000007 ORTHO05D000017 1.1e-12 77.8 183 33.3
CAN.G2177.13 Capsicum annuum HOM05D000007 ORTHO05D000017 1.4e-12 77.4 187 33.7
PGSC0003DMG400040830 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.4e-12 77.4 164 35.4
CAN.G2177.14 Capsicum annuum HOM05D000007 ORTHO05D000017 1.9e-12 77.0 168 35.1
CAN.G1565.4 Capsicum annuum HOM05D000007 ORTHO05D000017 2.5e-12 76.6 187 32.6
CAN.G1799.9 Capsicum annuum HOM05D000007 ORTHO05D000017 3.2e-12 76.3 173 35.8
PGSC0003DMG400040257 Solanum tuberosum HOM05D000007 ORTHO05D000017 3.2e-12 76.3 170 34.7
CAN.G484.1 Capsicum annuum HOM05D000007 ORTHO05D000017 4.2e-12 75.9 170 30.0
Nitab4.5_0000743g0070 Nicotiana tabacum HOM05D000007 ORTHO05D000017 4.2e-12 75.9 177 33.9
CAN.G484.2 Capsicum annuum HOM05D000007 ORTHO05D000017 9.4e-12 74.7 171 30.4
CAN.G575.75 Capsicum annuum HOM05D000007 ORTHO05D000017 9.4e-12 74.7 170 30.6
Nitab4.5_0001088g0160 Nicotiana tabacum HOM05D000007 ORTHO05D000017 9.4e-12 74.7 199 32.2
PGSC0003DMG400027935 Solanum tuberosum HOM05D000007 ORTHO05D000017 9.4e-12 74.7 178 33.7
Nitab4.5_0004725g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.2e-11 74.3 167 32.9
CAN.G181.19 Capsicum annuum HOM05D000007 ORTHO05D000017 2.1e-11 73.6 187 33.7
CAN.G222.162 Capsicum annuum HOM05D000007 ORTHO05D000017 2.7e-11 73.2 202 31.2
PGSC0003DMG400043742 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.7e-11 73.2 184 29.3
CAN.G1470.10 Capsicum annuum HOM05D000007 ORTHO05D000017 3.6e-11 72.8 190 29.5
CAN.G375.46 Capsicum annuum HOM05D000007 ORTHO05D000017 3.6e-11 72.8 183 32.8
PGSC0003DMG400034923 Solanum tuberosum HOM05D000007 ORTHO05D000017 3.6e-11 72.8 185 32.4
CAN.G1579.16 Capsicum annuum HOM05D000007 ORTHO05D000017 4.7e-11 72.4 188 28.7
PGSC0003DMG400022273 Solanum tuberosum HOM05D000007 ORTHO05D000949 6.1e-11 72.0 193 30.1
Nitab4.5_0003359g0050 Nicotiana tabacum HOM05D000007 ORTHO05D000017 7.9e-11 71.6 192 32.3
Nitab4.5_0015235g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 7.9e-11 71.6 143 35.7
PGSC0003DMG400036000 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.8e-10 70.5 188 30.9
PGSC0003DMG400039496 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.8e-10 70.5 188 30.9
Nitab4.5_0001198g0090 Nicotiana tabacum HOM05D000007 ORTHO05D000017 3.9e-10 69.3 199 32.7
CAN.G644.29 Capsicum annuum HOM05D000007 ORTHO05D000017 8.8e-10 68.2 170 32.4
Sopen11g004020 Solanum pennellii HOM05D000007 ORTHO05D000017 8.8e-10 68.2 199 30.7
PGSC0003DMG400040151 Solanum tuberosum HOM05D000007 ORTHO05D000017 8.8e-10 68.2 180 28.9
PGSC0003DMG400013260 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.1e-09 67.8 190 30.0
PGSC0003DMG400001294 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.5e-09 67.4 176 29.5
CAN.G1121.8 Capsicum annuum HOM05D000007 ORTHO05D000017 2.0e-09 67.0 185 30.3
Sopen11g006650 Solanum pennellii HOM05D000007 ORTHO05D000017 2.0e-09 67.0 181 29.8
Sopen11g004110 Solanum pennellii HOM05D000007 ORTHO05D000017 2.6e-09 66.6 200 31.0
CAN.G1470.6 Capsicum annuum HOM05D000007 ORTHO05D000017 5.7e-09 65.5 201 30.8
Sopen02g032030 Solanum pennellii HOM05D000007 ORTHO05D000017 5.7e-09 65.5 174 32.8
PGSC0003DMG400003869 Solanum tuberosum HOM05D000007 ORTHO05D000017 7.4e-09 65.1 187 29.4
CAN.G1703.14 Capsicum annuum HOM05D000007 ORTHO05D000017 9.7e-09 64.7 92 44.6
CAN.G1121.7 Capsicum annuum HOM05D000007 ORTHO05D000017 1.3e-08 64.3 176 30.7
CAN.G645.21 Capsicum annuum HOM05D000007 ORTHO05D000017 1.3e-08 64.3 195 29.7
PGSC0003DMG400043483 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.3e-08 64.3 176 28.4
Nitab4.5_0007853g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.7e-08 63.9 191 31.4
PGSC0003DMG400013272 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.2e-08 63.5 179 33.5
PGSC0003DMG401013254 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.2e-08 63.5 196 28.1
CAN.G3054.1 Capsicum annuum HOM05D000007 ORTHO05D000017 2.8e-08 63.2 160 31.2
Nitab4.5_0001668g0070 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.8e-08 63.2 98 39.8
CAN.G222.158 Capsicum annuum HOM05D000007 ORTHO05D000017 3.7e-08 62.8 172 29.7
CAN.G1121.10 Capsicum annuum HOM05D000002 ORTHO05D000001 8.2e-08 61.6 169 31.4
CAN.G500.25 Capsicum annuum HOM05D000007 ORTHO05D000017 8.2e-08 61.6 160 30.6
CAN.G500.29 Capsicum annuum HOM05D000007 ORTHO05D000017 8.2e-08 61.6 160 30.6
PGSC0003DMG400007431 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.1e-07 61.2 181 32.0
PGSC0003DMG400013290 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.4e-07 60.8 178 30.3
CAN.G884.13 Capsicum annuum HOM05D000007 ORTHO05D000017 1.8e-07 60.5 201 29.4
CAN.G1375.9 Capsicum annuum HOM05D000007 ORTHO05D000017 2.4e-07 60.1 181 30.9
CAN.G488.27 Capsicum annuum HOM05D000007 ORTHO05D000017 2.4e-07 60.1 179 27.9
Solyc01g104940.2 Solanum lycopersicum HOM05D000007 ORTHO05D000017 3.1e-07 59.7 130 33.1
CAN.G1209.1 Capsicum annuum HOM05D000007 ORTHO05D000017 4.1e-07 59.3 208 26.9
PGSC0003DMG400029801 Solanum tuberosum HOM05D000007 ORTHO05D000017 5.3e-07 58.9 184 27.7
CAN.G1126.11 Capsicum annuum HOM05D000007 ORTHO05D000017 7.0e-07 58.5 110 38.2
CAN.G1565.5 Capsicum annuum HOM05D000007 ORTHO05D000017 7.0e-07 58.5 141 33.3
Nitab4.5_0000271g0070 Nicotiana tabacum HOM05D000007 ORTHO05D000017 9.1e-07 58.2 90 43.3
Solyc11g012560.3 Solanum lycopersicum HOM05D000007 ORTHO05D000017 9.1e-07 58.2 175 29.7
Nitab4.5_0002184g0020 Nicotiana tabacum HOM05D000007 ORTHO05D019314 1.5e-06 57.4 218 24.3
Sopen11g007290 Solanum pennellii HOM05D000007 ORTHO05D000017 2.0e-06 57.0 173 28.3
PGSC0003DMG400013291 Solanum tuberosum HOM05D000007 ORTHO05D000017 2.0e-06 57.0 165 28.5
AUR62014756 Chenopodium quinoa HOM05D000007 ORTHO05D000017 3.5e-06 56.2 146 27.4
Peaxi162Scf00421g00008 Petunia axillaris HOM05D000007 ORTHO05D000017 3.5e-06 56.2 183 30.1
Peaxi162Scf00421g00021 Petunia axillaris HOM05D000007 ORTHO05D000017 3.5e-06 56.2 171 29.2
MSTRG.7163 Avicennia marina HOM05D000007 ORTHO05D000017 7.7e-06 55.1 163 26.4
Nitab4.5_0000143g0320 Nicotiana tabacum HOM05D000007 ORTHO05D000017 7.7e-06 55.1 118 37.3


User provided reference genes

Program Settings