Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G168.19 Capsicum annuum HOM05D000679 ORTHO05D000074 6.8e-148 527.3 270 100.0
CAN.G1079.4 Capsicum annuum HOM05D000679 ORTHO05D000137 3.2e-49 199.5 258 50.8
CAN.G1222.17 Capsicum annuum HOM05D000679 ORTHO05D000137 5.6e-25 119.0 74 89.2
CAN.G630.77 Capsicum annuum HOM05D000151 ORTHO05D000074 7.5e-22 108.6 69 81.2
CAN.G244.14 Capsicum annuum HOM05D000679 ORTHO05D000137 2.4e-20 103.6 71 74.6
CAN.G263.3 Capsicum annuum HOM05D000679 ORTHO05D000482 2.4e-20 103.6 71 76.1
CAN.G226.24 Capsicum annuum HOM05D000679 ORTHO05D000137 6.6e-18 95.5 216 36.1
CAN.G567.4 Capsicum annuum HOM05D000151 ORTHO05D000074 1.6e-16 90.9 93 55.9
CAN.G567.7 Capsicum annuum HOM05D000151 ORTHO05D000074 8.1e-16 88.6 60 71.7
Peaxi162Scf00111g00720 Petunia axillaris HOM05D000151 ORTHO05D000074 8.9e-15 85.1 64 64.1
Peaxi162Scf00848g00114 Petunia axillaris HOM05D000151 ORTHO05D000074 8.9e-15 85.1 58 70.7
CAN.G630.68 Capsicum annuum HOM05D000151 ORTHO05D000074 1.5e-14 84.3 92 51.1
Nitab4.5_0002793g0080 Nicotiana tabacum HOM05D000151 ORTHO05D000074 7.6e-14 82.0 64 70.3
CAN.G567.2 Capsicum annuum HOM05D000151 ORTHO05D000074 1.3e-13 81.3 58 63.8
Peaxi162Scf00074g00732 Petunia axillaris HOM05D000151 ORTHO05D000074 1.3e-13 81.3 120 47.5
Nitab4.5_0001179g0150 Nicotiana tabacum HOM05D000151 ORTHO05D000074 2.2e-13 80.5 64 62.5
Nitab4.5_0002823g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.2e-13 80.5 62 58.1
Nitab4.5_0004200g0110 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.2e-13 80.5 56 60.7
Nitab4.5_0012461g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.9e-13 80.1 56 58.9
Peaxi162Scf00074g00077 Petunia axillaris HOM05D000151 ORTHO05D000074 4.9e-13 79.3 58 65.5
Nitab4.5_0000980g0110 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.4e-12 77.8 61 57.4
Nitab4.5_0005319g0020 Nicotiana tabacum HOM05D000151 ORTHO05D000074 1.9e-12 77.4 69 62.3
Nitab4.5_0000306g0070 Nicotiana tabacum HOM05D000679 ORTHO05D000482 3.2e-12 76.6 56 57.1
Nitab4.5_0005258g0010 Nicotiana tabacum HOM05D000151 ORTHO05D000074 3.2e-12 76.6 86 57.0
CAN.G630.69 Capsicum annuum HOM05D000151 ORTHO05D000074 4.1e-12 76.3 47 80.9
Nitab4.5_0008013g0020 Nicotiana tabacum HOM05D000151 ORTHO05D000074 4.1e-12 76.3 91 48.4
Nitab4.5_0001095g0040 Nicotiana tabacum HOM05D000151 ORTHO05D000074 7.1e-12 75.5 91 47.3
PGSC0003DMG400040058 Solanum tuberosum HOM05D000151 ORTHO05D000074 7.1e-12 75.5 84 44.0
PGSC0003DMG400012271 Solanum tuberosum HOM05D000151 ORTHO05D000074 9.2e-12 75.1 85 43.5
PGSC0003DMG400001736 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.2e-11 74.7 61 59.0
PGSC0003DMG400041657 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.2e-11 74.7 67 58.2
Nitab4.5_0000464g0070 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.6e-11 74.3 61 59.0
Nitab4.5_0000798g0030 Nicotiana tabacum HOM05D000151 ORTHO05D000074 1.6e-11 74.3 61 57.4
Nitab4.5_0005195g0110 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.6e-11 74.3 55 56.4
Nitab4.5_0008940g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.1e-11 73.9 61 54.1
Sopen08g030770 Solanum pennellii HOM05D000151 ORTHO05D000074 2.1e-11 73.9 78 46.2
Nitab4.5_0001231g0020 Nicotiana tabacum HOM05D000151 ORTHO05D000074 2.7e-11 73.6 59 62.7
PGSC0003DMG400045925 Solanum tuberosum HOM05D000151 ORTHO05D000074 3.5e-11 73.2 61 63.9
Nitab4.5_0014318g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 4.6e-11 72.8 61 54.1
Peaxi162Scf00064g01639 Petunia axillaris HOM05D000151 ORTHO05D000074 4.6e-11 72.8 61 60.7
Solyc08g082510.1 Solanum lycopersicum HOM05D000151 ORTHO05D000074 4.6e-11 72.8 62 61.3
Nitab4.5_0001714g0070 Nicotiana tabacum HOM05D000679 ORTHO05D000482 6.0e-11 72.4 154 36.4
Nitab4.5_0022521g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 6.0e-11 72.4 114 38.6
Peaxi162Scf00746g00014 Petunia axillaris HOM05D000151 ORTHO05D000074 6.0e-11 72.4 69 52.2
Peaxi162Scf02151g00007 Petunia axillaris HOM05D000151 ORTHO05D000074 6.0e-11 72.4 69 52.2
PGSC0003DMG400041659 Solanum tuberosum HOM05D000151 ORTHO05D000074 6.0e-11 72.4 91 42.9
Nitab4.5_0000357g0130 Nicotiana tabacum HOM05D000679 ORTHO05D000482 7.8e-11 72.0 54 61.1
Nitab4.5_0013794g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.0e-10 71.6 69 49.3
Peaxi162Scf00271g00224 Petunia axillaris HOM05D000151 ORTHO05D000074 1.0e-10 71.6 63 60.3
Peaxi162Scf39827g00001 Petunia axillaris HOM05D000151 ORTHO05D000074 1.0e-10 71.6 63 60.3
Sopen10g010760 Solanum pennellii HOM05D000002 ORTHO05D000001 1.0e-10 71.6 50 60.0
PGSC0003DMG400012270 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.0e-10 71.6 58 55.2
PGSC0003DMG400041413 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.0e-10 71.6 58 55.2
Nitab4.5_0000425g0130 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.3e-10 71.2 61 52.5
Peaxi162Scf00746g00033 Petunia axillaris HOM05D000151 ORTHO05D000074 1.3e-10 71.2 77 49.4
Nitab4.5_0000028g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.7e-10 70.9 61 50.8
Nitab4.5_0005869g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.7e-10 70.9 61 52.5
Peaxi162Scf00746g00028 Petunia axillaris HOM05D000151 ORTHO05D000074 1.7e-10 70.9 69 50.7
PGSC0003DMG400040430 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.7e-10 70.9 84 45.2
Nitab4.5_0000798g0020 Nicotiana tabacum HOM05D000151 ORTHO05D000074 3.0e-10 70.1 59 55.9
Nitab4.5_0002005g0060 Nicotiana tabacum HOM05D000679 ORTHO05D000482 3.0e-10 70.1 76 50.0
Nitab4.5_0004917g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.0e-10 70.1 61 54.1
Nitab4.5_0006628g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000137 3.0e-10 70.1 61 54.1
Peaxi162Scf00074g00631 Petunia axillaris HOM05D000151 ORTHO05D000074 3.0e-10 70.1 67 58.2
Peaxi162Scf00119g00111 Petunia axillaris HOM05D000151 ORTHO05D000074 3.0e-10 70.1 61 59.0
Nitab4.5_0003015g0050 Nicotiana tabacum HOM05D000151 ORTHO05D000074 3.9e-10 69.7 60 56.7
Nitab4.5_0003730g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000482 3.9e-10 69.7 60 51.7
Nitab4.5_0008941g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000482 3.9e-10 69.7 61 52.5
Nitab4.5_0002538g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 5.1e-10 69.3 151 31.1
Nitab4.5_0006099g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000482 5.1e-10 69.3 56 55.4
Sopen08g030760 Solanum pennellii HOM05D000151 ORTHO05D000074 5.1e-10 69.3 59 55.9
Peaxi162Scf00271g00223 Petunia axillaris HOM05D000151 ORTHO05D000074 6.6e-10 68.9 93 44.1
Peaxi162Scf00746g00412 Petunia axillaris HOM05D000151 ORTHO05D000074 6.6e-10 68.9 58 53.4
CAN.G637.41 Capsicum annuum HOM05D000679 ORTHO05D000137 8.6e-10 68.6 52 48.1
Nitab4.5_0001361g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.1e-09 68.2 125 34.4
Nitab4.5_0002993g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.1e-09 68.2 50 58.0
Nitab4.5_0003628g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.1e-09 68.2 55 50.9
Peaxi162Scf00074g00438 Petunia axillaris HOM05D000151 ORTHO05D000074 1.1e-09 68.2 57 61.4
Solyc08g082485.1 Solanum lycopersicum HOM05D000151 ORTHO05D000074 1.1e-09 68.2 59 54.2
PGSC0003DMG400001763 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.1e-09 68.2 58 58.6
Nitab4.5_0000983g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.5e-09 67.8 61 55.7
Nitab4.5_0004051g0070 Nicotiana tabacum HOM05D000151 ORTHO05D000074 1.9e-09 67.4 60 55.0
Peaxi162Scf00119g01111 Petunia axillaris HOM05D000151 ORTHO05D000074 1.9e-09 67.4 58 60.3
Peaxi162Scf00746g00410 Petunia axillaris HOM05D000151 ORTHO05D000074 1.9e-09 67.4 72 52.8
Nitab4.5_0008559g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.5e-09 67.0 64 50.0
Nitab4.5_0008647g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.5e-09 67.0 56 53.6
PGSC0003DMG400001765 Solanum tuberosum HOM05D000151 ORTHO05D000074 2.5e-09 67.0 58 56.9
PGSC0003DMG400012272 Solanum tuberosum HOM05D000151 ORTHO05D000074 2.5e-09 67.0 54 59.3
Peaxi162Scf00714g00059 Petunia axillaris HOM05D000151 ORTHO05D000074 4.3e-09 66.2 59 62.7
CAN.G567.6 Capsicum annuum HOM05D000151 ORTHO05D000074 5.6e-09 65.9 56 58.9
Nitab4.5_0007686g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000482 5.6e-09 65.9 61 50.8
Nitab4.5_0014780g0010 Nicotiana tabacum HOM05D000679 ORTHO05D000482 5.6e-09 65.9 50 58.0
PGSC0003DMG400027899 Solanum tuberosum HOM05D000151 ORTHO05D000074 5.6e-09 65.9 57 57.9
Nitab4.5_0002750g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 7.3e-09 65.5 61 50.8
Peaxi162Scf00062g00069 Petunia axillaris HOM05D000151 ORTHO05D000074 7.3e-09 65.5 86 50.0
Peaxi162Scf00746g00510 Petunia axillaris HOM05D000151 ORTHO05D000074 7.3e-09 65.5 58 50.0
PGSC0003DMG400003928 Solanum tuberosum HOM05D000151 ORTHO05D000074 7.3e-09 65.5 83 45.8
Nitab4.5_0010825g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 9.6e-09 65.1 61 50.8
Nitab4.5_0002948g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.2e-08 64.7 61 50.8
Nitab4.5_0002151g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000137 1.6e-08 64.3 61 49.2
Nitab4.5_0002353g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.6e-08 64.3 61 49.2
Nitab4.5_0010113g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 1.6e-08 64.3 61 50.8
PGSC0003DMG400043347 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.6e-08 64.3 87 44.8
PGSC0003DMG402028917 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.6e-08 64.3 87 44.8
Sopen06g025910 Solanum pennellii HOM05D000151 ORTHO05D000074 2.1e-08 63.9 87 43.7
PGSC0003DMG400001762 Solanum tuberosum HOM05D000151 ORTHO05D000074 2.8e-08 63.5 60 51.7
PGSC0003DMG400009902 Solanum tuberosum HOM05D000151 ORTHO05D000074 2.8e-08 63.5 65 50.8
Solyc04g082360.2 Solanum lycopersicum HOM05D000151 ORTHO05D000074 3.6e-08 63.2 57 56.1
Nitab4.5_0001140g0240 Nicotiana tabacum HOM05D000679 ORTHO05D000482 4.7e-08 62.8 145 32.4
Sopen00g004650 Solanum pennellii HOM05D000679 ORTHO05D000137 4.7e-08 62.8 74 41.9
Sopen07g022050 Solanum pennellii HOM05D000679 ORTHO05D000482 4.7e-08 62.8 74 41.9
PGSC0003DMG400001764 Solanum tuberosum HOM05D000151 ORTHO05D000074 4.7e-08 62.8 61 50.8
PGSC0003DMG400019312 Solanum tuberosum HOM05D000679 ORTHO05D000482 4.7e-08 62.8 44 59.1
Nitab4.5_0006125g0030 Nicotiana tabacum HOM05D000151 ORTHO05D000074 8.1e-08 62.0 58 56.9
Peaxi162Scf00074g00630 Petunia axillaris HOM05D000151 ORTHO05D000074 8.1e-08 62.0 57 57.9
Sopen04g035970 Solanum pennellii HOM05D000151 ORTHO05D000074 8.1e-08 62.0 57 54.4
CAN.G1077.11 Capsicum annuum HOM05D000679 ORTHO05D000137 1.1e-07 61.6 52 44.2
CAN.G971.1 Capsicum annuum HOM05D000679 ORTHO05D000137 1.1e-07 61.6 52 44.2
Sopen01g016320 Solanum pennellii HOM05D000679 ORTHO05D000482 1.1e-07 61.6 69 43.5
Sopen11g022980 Solanum pennellii HOM05D000679 ORTHO05D000137 1.1e-07 61.6 74 40.5
Peaxi162Scf00760g10023 Petunia axillaris HOM05D000151 ORTHO05D000074 1.8e-07 60.8 80 48.8
PGSC0003DMG400034482 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.8e-07 60.8 60 50.0
Sopen01g014180 Solanum pennellii HOM05D000679 ORTHO05D000137 2.4e-07 60.5 74 41.9
PGSC0003DMG400003927 Solanum tuberosum HOM05D000151 ORTHO05D000074 2.4e-07 60.5 60 51.7
Sopen12g021510 Solanum pennellii HOM05D000679 ORTHO05D000137 3.1e-07 60.1 69 42.0
PGSC0003DMG400046174 Solanum tuberosum HOM05D000679 ORTHO05D000482 3.1e-07 60.1 75 38.7
Nitab4.5_0013533g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000482 4.0e-07 59.7 168 33.9
Sopen09g002090 Solanum pennellii HOM05D000151 ORTHO05D000074 4.0e-07 59.7 61 47.5
Nitab4.5_0000110g0300 Nicotiana tabacum HOM05D000679 ORTHO05D000482 5.2e-07 59.3 47 55.3
Nitab4.5_0001425g0150 Nicotiana tabacum HOM05D000679 ORTHO05D000482 5.2e-07 59.3 42 64.3
CAN.G413.23 Capsicum annuum HOM05D000679 ORTHO05D000137 6.8e-07 58.9 75 33.3
Peaxi162Scf00280g00034 Petunia axillaris HOM05D000151 ORTHO05D000074 6.8e-07 58.9 59 57.6
Sopen04g008640 Solanum pennellii HOM05D000151 ORTHO05D000074 6.8e-07 58.9 72 41.7
PGSC0003DMG400043406 Solanum tuberosum HOM05D000151 ORTHO05D000074 6.8e-07 58.9 94 37.2
CAN.G698.6 Capsicum annuum HOM05D000679 ORTHO05D000482 8.9e-07 58.5 202 26.7
Sopen06g015940 Solanum pennellii HOM05D000679 ORTHO05D000482 1.2e-06 58.2 55 45.5
CAN.G1191.13 Capsicum annuum HOM05D000679 ORTHO05D000137 1.5e-06 57.8 75 33.3
Peaxi162Scf00074g00073 Petunia axillaris HOM05D000151 ORTHO05D000074 1.5e-06 57.8 67 50.7
Sopen09g026450 Solanum pennellii HOM05D000679 ORTHO05D000137 1.5e-06 57.8 49 51.0
Sopen11g024470 Solanum pennellii HOM05D000679 ORTHO05D000482 1.5e-06 57.8 49 51.0
Sopen12g022010 Solanum pennellii HOM05D000002 ORTHO05D000001 1.5e-06 57.8 49 51.0
PGSC0003DMG400009857 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.5e-06 57.8 116 31.9
PGSC0003DMG400012867 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.5e-06 57.8 61 49.2
PGSC0003DMG400018077 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.5e-06 57.8 116 31.9
PGSC0003DMG400040741 Solanum tuberosum HOM05D000151 ORTHO05D000074 1.5e-06 57.8 62 50.0
Nitab4.5_0000335g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.0e-06 57.4 48 54.2
CAN.G1711.9 Capsicum annuum HOM05D000151 ORTHO05D002065 2.6e-06 57.0 76 40.8
Nitab4.5_0000469g0020 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.6e-06 57.0 50 50.0
Nitab4.5_0000516g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000482 2.6e-06 57.0 67 41.8
Sopen01g053420 Solanum pennellii HOM05D000679 ORTHO05D014266 2.6e-06 57.0 50 50.0
PGSC0003DMG400018156 Solanum tuberosum HOM05D000151 ORTHO05D000074 2.6e-06 57.0 88 37.5
CAN.G363.16 Capsicum annuum HOM05D000541 ORTHO05D000137 3.4e-06 56.6 54 55.6
Nitab4.5_0000709g0050 Nicotiana tabacum HOM05D000679 ORTHO05D000482 3.4e-06 56.6 47 53.2
Nitab4.5_0009705g0030 Nicotiana tabacum HOM05D000679 ORTHO05D000482 3.4e-06 56.6 55 47.3
Peaxi162Scf00017g00215 Petunia axillaris HOM05D000151 ORTHO05D000074 3.4e-06 56.6 77 42.9
Peaxi162Scf00089g00158 Petunia axillaris HOM05D000151 ORTHO05D000074 3.4e-06 56.6 68 42.6
Solyc06g050740.1 Solanum lycopersicum HOM05D000679 ORTHO05D000482 3.4e-06 56.6 49 49.0
Sopen04g019640 Solanum pennellii HOM05D000151 ORTHO05D000074 3.4e-06 56.6 60 46.7
PGSC0003DMG400038971 Solanum tuberosum HOM05D000151 ORTHO05D000074 3.4e-06 56.6 94 37.2
Peaxi162Scf00265g00013 Petunia axillaris HOM05D000151 ORTHO05D000074 4.4e-06 56.2 60 51.7
Sopen05g027730 Solanum pennellii HOM05D000679 ORTHO05D000137 4.4e-06 56.2 74 39.2
PGSC0003DMG400041939 Solanum tuberosum HOM05D000151 ORTHO05D000074 4.4e-06 56.2 72 43.1
Solyc03g113160.1 Solanum lycopersicum HOM05D000151 ORTHO05D000074 5.8e-06 55.8 93 39.8
Sopen03g032220 Solanum pennellii HOM05D000151 ORTHO05D000074 5.8e-06 55.8 93 39.8
CAN.G532.122 Capsicum annuum HOM05D000151 ORTHO05D000074 7.6e-06 55.5 87 39.1
CAN.G633.6 Capsicum annuum HOM05D000679 ORTHO05D000137 7.6e-06 55.5 109 32.1
Nitab4.5_0000678g0060 Nicotiana tabacum HOM05D000679 ORTHO05D000482 7.6e-06 55.5 137 33.6
Nitab4.5_0001115g0100 Nicotiana tabacum HOM05D000679 ORTHO05D000482 7.6e-06 55.5 61 45.9
Nitab4.5_0005005g0040 Nicotiana tabacum HOM05D000679 ORTHO05D000482 7.6e-06 55.5 41 61.0
CAN.G1239.12 Capsicum annuum HOM05D000679 ORTHO05D000137 9.9e-06 55.1 155 28.4
CAN.G575.73 Capsicum annuum HOM05D000679 ORTHO05D000137 9.9e-06 55.1 50 42.0
CAN.G622.1 Capsicum annuum HOM05D000004 ORTHO05D000002 9.9e-06 55.1 51 60.8
Cc08_g14360 Coffea canephora HOM05D000151 ORTHO05D000074 9.9e-06 55.1 78 44.9
Nitab4.5_0002002g0080 Nicotiana tabacum HOM05D000679 ORTHO05D000482 9.9e-06 55.1 57 47.4
Peaxi162Scf01221g00008 Petunia axillaris HOM05D000151 ORTHO05D000074 9.9e-06 55.1 88 36.4


User provided reference genes

Program Settings