Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1662.2 Capsicum annuum HOM05D000527 ORTHO05D018839 2.2e-38 161.8 80 100.0
CAN.G822.1 Capsicum annuum HOM05D000527 ORTHO05D018839 6.9e-24 113.6 58 94.8
PGSC0003DMG400030891 Solanum tuberosum HOM05D000527 ORTHO05D000559 2.4e-16 88.6 66 68.2
Solyc07g007930.3 Solanum lycopersicum HOM05D000527 ORTHO05D000559 3.1e-16 88.2 66 68.2
Sopen07g003810 Solanum pennellii HOM05D000527 ORTHO05D000559 3.1e-16 88.2 66 68.2
Nitab4.5_0002008g0050 Nicotiana tabacum HOM05D000527 ORTHO05D000559 7.0e-16 87.0 66 68.2
Nitab4.5_0009377g0040 Nicotiana tabacum HOM05D000527 ORTHO05D000559 7.0e-16 87.0 66 68.2
CAN.G809.83 Capsicum annuum HOM05D000527 ORTHO05D000559 1.6e-15 85.9 66 66.7
Nitab4.5_0005465g0030 Nicotiana tabacum HOM05D000527 ORTHO05D000559 2.6e-15 85.1 66 68.2
Peaxi162Scf00088g01328 Petunia axillaris HOM05D000527 ORTHO05D000559 4.5e-15 84.3 66 68.2
Rhsim01G0061700 Rhododendron simsii HOM05D000527 ORTHO05D000559 1.8e-11 72.4 66 59.1
Hma1.2p1_0497F.1_g166370 Hydrangea macrophylla HOM05D000527 ORTHO05D000559 6.7e-11 70.5 66 53.0
Dinv36479 Davidia involucrata HOM05D000527 ORTHO05D000559 2.6e-10 68.6 66 53.0
Manes.01G175500 Manihot esculenta HOM05D000527 ORTHO05D000559 2.6e-10 68.6 67 49.3
vmacro07720 Vaccinium macrocarpon HOM05D000527 ORTHO05D000559 5.7e-10 67.4 66 56.1
CSS0014911 Camellia sinensis var. sinensis HOM05D000527 ORTHO05D018839 9.7e-10 66.6 66 53.0
Cc06_g08070 Coffea canephora HOM05D000527 ORTHO05D000559 2.8e-09 65.1 67 49.3
Eucgr.C04266 Eucalyptus grandis HOM05D000527 ORTHO05D000559 1.4e-08 62.8 67 46.3
SalBow1G6103 Salvia bowleyana HOM05D000527 ORTHO05D000559 3.1e-08 61.6 67 49.3
Nn2g12118 Nelumbo nucifera HOM05D000527 ORTHO05D000559 5.3e-08 60.8 66 47.0
Actinidia40499 Actinidia chinensis HOM05D000527 ORTHO05D000559 7.0e-08 60.5 66 53.0
Potri.018G126400 Populus trichocarpa HOM05D000527 ORTHO05D000559 7.0e-08 60.5 66 47.0
Cfa003422 Carpinus fangiana HOM05D000527 ORTHO05D000559 1.6e-07 59.3 66 43.9
Duzib150G0955 Durio zibethinus HOM05D000527 ORTHO05D000559 1.6e-07 59.3 66 47.0
Potri.006G065700 Populus trichocarpa HOM05D000527 ORTHO05D000559 1.6e-07 59.3 66 47.0
Duzib168G2387 Durio zibethinus HOM05D000527 ORTHO05D000559 2.7e-07 58.5 66 47.0
TAR383G0644 Trochodendron aralioides HOM05D000527 ORTHO05D000559 2.7e-07 58.5 67 46.3
CiPaw.03G248400 Carya illinoinensis HOM05D000527 ORTHO05D000559 3.5e-07 58.2 66 45.5
Haze_25510 Corylus avellana HOM05D000527 ORTHO05D000559 3.5e-07 58.2 66 43.9
Sabra06G0047900 Salix brachista HOM05D000527 ORTHO05D000559 3.5e-07 58.2 66 47.0
COL.COLO4_35153 Corchorus olitorius HOM05D000527 ORTHO05D000559 4.5e-07 57.8 66 48.5
CDE06G2805 Ceratophyllum demersum HOM05D000527 ORTHO05D000559 3.8e-06 54.7 66 42.4
Thecc.09G132000 Theobroma cacao HOM05D000527 ORTHO05D000559 5.0e-06 54.3 66 43.9
TAR625G0943 Trochodendron aralioides HOM05D000527 ORTHO05D000559 5.0e-06 54.3 66 45.5


User provided reference genes

Program Settings