Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G16510.1 Capsicum annuum HOM05D000101 ORTHO05D000089 5.7e-80 301.2 194 100.0
CAN.G1661.1 Capsicum annuum HOM05D000101 ORTHO05D000089 2.3e-57 226.1 181 87.8
CAN.G1661.5 Capsicum annuum HOM05D000101 ORTHO05D000089 1.1e-54 217.2 181 68.0
CAN.G9233.1 Capsicum annuum HOM05D000101 ORTHO05D000089 1.8e-49 199.9 186 82.3
CAN.G1661.6 Capsicum annuum HOM05D000101 ORTHO05D000089 2.9e-47 192.6 188 58.0
CAN.G1661.7 Capsicum annuum HOM05D000101 ORTHO05D000089 1.6e-42 176.8 181 61.9
CAN.G1661.9 Capsicum annuum HOM05D000101 ORTHO05D000089 4.7e-42 175.3 192 55.2
CAN.G11179.1 Capsicum annuum HOM05D000101 ORTHO05D000089 2.3e-41 172.9 183 55.2
CAN.G639.26 Capsicum annuum HOM05D000101 ORTHO05D000089 6.8e-41 171.4 190 54.2
CAN.G261.9 Capsicum annuum HOM05D000101 ORTHO05D000089 3.1e-33 146.0 191 48.7
CAN.G1661.3 Capsicum annuum HOM05D000101 ORTHO05D000089 1.2e-32 144.1 115 66.1
CAN.G9370.1 Capsicum annuum HOM05D000101 ORTHO05D000089 3.4e-32 142.5 147 64.6
CAN.G1963.6 Capsicum annuum HOM05D000101 ORTHO05D000089 8.9e-25 117.9 215 50.2
CAN.G1963.5 Capsicum annuum HOM05D000101 ORTHO05D000089 4.6e-21 105.5 174 50.6
Oeu062624.1 Olea europaea HOM05D000101 ORTHO05D000089 2.3e-12 76.6 165 43.0
Thecc.07G072100 Theobroma cacao HOM05D000101 ORTHO05D000089 2.1e-10 70.1 177 36.7
Cc07_g18670 Coffea canephora HOM05D000101 ORTHO05D000089 6.2e-10 68.6 183 30.1
Duzib268G1835 Durio zibethinus HOM05D000101 ORTHO05D000089 4.0e-09 65.9 138 31.9
CAN.G639.27 Capsicum annuum HOM05D000101 ORTHO05D000089 5.3e-09 65.5 60 60.0
Dinv01249 Davidia involucrata HOM05D000101 ORTHO05D000089 1.5e-08 63.9 182 39.6
Dinv02505 Davidia involucrata HOM05D000101 ORTHO05D000089 1.5e-08 63.9 187 30.5
Dinv19550 Davidia involucrata HOM05D000101 ORTHO05D000089 1.5e-08 63.9 187 30.5
CAN.G6637.1 Capsicum annuum HOM05D000101 ORTHO05D000089 3.4e-08 62.8 91 63.7
Dinv24581 Davidia involucrata HOM05D000101 ORTHO05D000089 1.7e-07 60.5 127 33.9
Gorai.009G432400 Gossypium raimondii HOM05D000101 ORTHO05D000089 2.2e-07 60.1 188 34.6
Gohir.D05G350200 Gossypium hirsutum HOM05D000101 ORTHO05D000089 2.9e-07 59.7 154 40.9
Gorai.009G380000 Gossypium raimondii HOM05D000101 ORTHO05D000089 2.9e-07 59.7 154 40.9
Oeu059288.1 Olea europaea HOM05D000101 ORTHO05D000089 3.8e-07 59.3 138 32.6
Oeu052121.2 Olea europaea HOM05D000101 ORTHO05D000089 4.9e-07 58.9 138 34.8
Cc07_g18690 Coffea canephora HOM05D000101 ORTHO05D000089 6.4e-07 58.5 136 30.9
Gohir.A04G033550 Gossypium hirsutum HOM05D000101 ORTHO05D000089 8.4e-07 58.2 184 27.2
Gohir.A04G033000 Gossypium hirsutum HOM05D000101 ORTHO05D000089 1.1e-06 57.8 145 41.4
Gorai.009G383200 Gossypium raimondii HOM05D000101 ORTHO05D000089 1.4e-06 57.4 138 41.3
Peaxi162Scf00264g00067 Petunia axillaris HOM05D000101 ORTHO05D000089 1.4e-06 57.4 128 45.3
Gohir.A04G027800 Gossypium hirsutum HOM05D000101 ORTHO05D000089 1.9e-06 57.0 133 43.6
Gohir.D05G360300 Gossypium hirsutum HOM05D000101 ORTHO05D000089 1.9e-06 57.0 173 28.3
Gorai.009G379500 Gossypium raimondii HOM05D000101 ORTHO05D000089 1.9e-06 57.0 186 26.3
Dinv15018 Davidia involucrata HOM05D000101 ORTHO05D000089 3.2e-06 56.2 124 56.5
Glyma.18G281700 Glycine max HOM05D001292 ORTHO05D001202 3.2e-06 56.2 127 28.3
Gohir.A04G033400 Gossypium hirsutum HOM05D000101 ORTHO05D000089 3.2e-06 56.2 142 40.1
PGSC0003DMG400021469 Solanum tuberosum HOM05D000101 ORTHO05D000089 3.2e-06 56.2 176 26.1
CAN.G20682.1 Capsicum annuum HOM05D000101 ORTHO05D000089 5.4e-06 55.5 34 82.4
Glyma.18G281500 Glycine max HOM05D001292 ORTHO05D001202 5.4e-06 55.5 127 39.4
Gohir.A04G033300 Gossypium hirsutum HOM05D000101 ORTHO05D000089 5.4e-06 55.5 141 29.1
Gohir.D05G350000 Gossypium hirsutum HOM05D000101 ORTHO05D000089 5.4e-06 55.5 130 42.3
Gohir.A04G036100 Gossypium hirsutum HOM05D000101 ORTHO05D000089 7.1e-06 55.1 140 32.9
Gohir.D05G354900 Gossypium hirsutum HOM05D000101 ORTHO05D000089 9.3e-06 54.7 190 29.5
Gorai.009G379800 Gossypium raimondii HOM05D000101 ORTHO05D000089 9.3e-06 54.7 130 40.8
Gorai.009G430600 Gossypium raimondii HOM05D000101 ORTHO05D000089 9.3e-06 54.7 133 39.8


User provided reference genes

Program Settings