Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1646.4 Capsicum annuum HOM05D018515 ORTHO05D002107 1.1e-92 343.2 168 100.0
Sopen03g037800 Solanum pennellii HOM05D000004 ORTHO05D000002 4.3e-60 235.0 167 66.5
Sopen01g013800 Solanum pennellii HOM05D000004 ORTHO05D000002 1.8e-58 229.6 167 65.9
Sopen11g019720 Solanum pennellii HOM05D000004 ORTHO05D000002 2.9e-56 222.2 167 63.5
CAN.G1012.10 Capsicum annuum HOM05D000004 ORTHO05D002107 1.1e-47 193.7 109 83.5
Sopen08g020120 Solanum pennellii HOM05D000004 ORTHO05D000002 6.1e-46 188.0 167 56.3
PGSC0003DMG400036820 Solanum tuberosum HOM05D018515 ORTHO05D002107 5.2e-37 158.3 149 57.7
Sopen09g024920 Solanum pennellii HOM05D000004 ORTHO05D000002 3.3e-36 155.6 110 66.4
Sopen11g022280 Solanum pennellii HOM05D000002 ORTHO05D000001 2.8e-35 152.5 167 49.7
Sopen01g025330 Solanum pennellii HOM05D000004 ORTHO05D000002 1.6e-33 146.7 125 57.6
Sopen05g018990 Solanum pennellii HOM05D000002 ORTHO05D000002 4.5e-33 145.2 101 65.3
Sopen11g011210 Solanum pennellii HOM05D000004 ORTHO05D000002 8.5e-32 141.0 108 61.1
Sopen01g025150 Solanum pennellii HOM05D000004 ORTHO05D000002 1.5e-20 103.6 87 60.9
Ah.07g198610 Amaranthus hybridus HOM05D000004 ORTHO05D000002 5.0e-16 88.6 144 31.9
Sopen00g005290 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-16 88.6 57 73.7
Sopen10g015600 Solanum pennellii HOM05D018515 ORTHO05D002107 2.5e-15 86.3 103 52.4
Ah.13g069810 Amaranthus hybridus HOM05D000004 ORTHO05D000002 1.6e-14 83.6 83 43.4
Ah.04g156790 Amaranthus hybridus HOM05D000004 ORTHO05D000002 6.1e-14 81.6 83 43.4
PSO339G1491 Papaver somniferum HOM05D000004 ORTHO05D000002 6.1e-14 81.6 82 39.0
CAN.G1131.31 Capsicum annuum HOM05D018515 ORTHO05D002107 8.0e-14 81.3 56 69.6
Nitab4.5_0001387g0070 Nicotiana tabacum HOM05D010703 ORTHO05D014545 3.0e-13 79.3 103 38.8
AUR62022484 Chenopodium quinoa HOM05D000004 ORTHO05D000002 6.8e-13 78.2 102 40.2
Manes.16G043152 Manihot esculenta HOM05D016502 ORTHO05D019286 6.8e-13 78.2 137 34.3
PSO170G0905 Papaver somniferum HOM05D000004 ORTHO05D000002 8.9e-13 77.8 82 36.6
PSO455G0193 Papaver somniferum HOM05D000004 ORTHO05D000002 1.5e-12 77.0 82 37.8
Sopen06g014540 Solanum pennellii HOM05D000004 ORTHO05D000002 2.6e-12 76.3 113 33.6
Ah.01g012990 Amaranthus hybridus HOM05D000004 ORTHO05D000002 3.4e-12 75.9 85 40.0
AUR62031087 Chenopodium quinoa HOM05D000004 ORTHO05D000002 3.4e-12 75.9 93 37.6
Ah.15g097860 Amaranthus hybridus HOM05D012832 ORTHO05D019522 9.8e-12 74.3 68 45.6
PSO675G6875 Papaver somniferum HOM05D000004 ORTHO05D000002 9.8e-12 74.3 82 39.0
PSO170G4176 Papaver somniferum HOM05D000004 ORTHO05D000002 1.3e-11 73.9 82 37.8
PSO478G1373 Papaver somniferum HOM05D000004 ORTHO05D000002 1.3e-11 73.9 82 35.4
PSO675G9263 Papaver somniferum HOM05D000004 ORTHO05D000002 1.7e-11 73.6 81 34.6
PSO384G3277 Papaver somniferum HOM05D000004 ORTHO05D000002 2.2e-11 73.2 82 37.8
PSO170G4312 Papaver somniferum HOM05D000004 ORTHO05D000002 2.9e-11 72.8 75 38.7
Sopen10g023210 Solanum pennellii HOM05D018515 ORTHO05D002107 2.9e-11 72.8 101 42.6
PSO478G0230 Papaver somniferum HOM05D000004 ORTHO05D000002 3.7e-11 72.4 119 31.9
PSO675G5993 Papaver somniferum HOM05D000004 ORTHO05D000002 3.7e-11 72.4 93 34.4
PSO210G0982 Papaver somniferum HOM05D000004 ORTHO05D000002 4.9e-11 72.0 82 36.6
PSO675G0192 Papaver somniferum HOM05D000004 ORTHO05D000002 4.9e-11 72.0 91 35.2
PSO782G2610 Papaver somniferum HOM05D000004 ORTHO05D000002 4.9e-11 72.0 82 34.1
AUR62041613 Chenopodium quinoa HOM05D000004 ORTHO05D000002 6.4e-11 71.6 83 39.8
ECA232G0982 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.4e-11 71.6 84 41.7
Hma1.2p1_1778F.1_g302030 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 6.4e-11 71.6 203 25.6
PSO782G4522 Papaver somniferum HOM05D000004 ORTHO05D000002 6.4e-11 71.6 140 30.0
AUR62018652 Chenopodium quinoa HOM05D000004 ORTHO05D000002 8.3e-11 71.2 140 32.1
EL10Ac7g17357 Beta vulgaris HOM05D000004 ORTHO05D000002 1.1e-10 70.9 163 29.4
AUR62007189 Chenopodium quinoa HOM05D000004 ORTHO05D000002 1.4e-10 70.5 162 29.0
PSO017G1164 Papaver somniferum HOM05D000004 ORTHO05D000002 1.4e-10 70.5 155 27.1
AUR62033910 Chenopodium quinoa HOM05D000004 ORTHO05D000002 1.8e-10 70.1 90 38.9
PSO063G3882 Papaver somniferum HOM05D000004 ORTHO05D000002 1.8e-10 70.1 82 34.1
PSO210G6199 Papaver somniferum HOM05D000004 ORTHO05D000002 1.8e-10 70.1 83 36.1
EL10Ac9g22701 Beta vulgaris HOM05D000004 ORTHO05D000002 2.4e-10 69.7 75 40.0
AUR62033568 Chenopodium quinoa HOM05D000004 ORTHO05D000002 2.4e-10 69.7 83 38.6
Dinv12812 Davidia involucrata HOM05D000004 ORTHO05D000002 2.4e-10 69.7 82 37.8
Dinv29024 Davidia involucrata HOM05D000004 ORTHO05D000002 2.4e-10 69.7 82 37.8
AUR62006479 Chenopodium quinoa HOM05D000004 ORTHO05D000002 3.2e-10 69.3 83 37.3
Manes.05G186755 Manihot esculenta HOM05D000004 ORTHO05D000002 3.2e-10 69.3 84 39.3
AUR62007645 Chenopodium quinoa HOM05D000004 ORTHO05D000002 4.1e-10 68.9 154 29.2
AUR62037042 Chenopodium quinoa HOM05D000004 ORTHO05D000002 5.4e-10 68.6 83 38.6
CAN.G1475.6 Capsicum annuum HOM05D010703 ORTHO05D014545 7.0e-10 68.2 166 27.1
AUR62016413 Chenopodium quinoa HOM05D000004 ORTHO05D000002 7.0e-10 68.2 83 38.6
PSO063G2480 Papaver somniferum HOM05D000004 ORTHO05D000002 7.0e-10 68.2 81 32.1
PSO478G1420 Papaver somniferum HOM05D000004 ORTHO05D000002 7.0e-10 68.2 81 30.9
CAN.G247.14 Capsicum annuum HOM05D018515 ORTHO05D002107 9.2e-10 67.8 60 55.0
AUR62026331 Chenopodium quinoa HOM05D000004 ORTHO05D000002 9.2e-10 67.8 154 30.5
PSO063G7453 Papaver somniferum HOM05D000004 ORTHO05D000002 9.2e-10 67.8 160 27.5
PSO160G0001 Papaver somniferum HOM05D000004 ORTHO05D000002 9.2e-10 67.8 74 39.2
PSO754G0085 Papaver somniferum HOM05D000004 ORTHO05D000002 9.2e-10 67.8 74 39.2
AUR62030093 Chenopodium quinoa HOM05D000349 ORTHO05D000002 1.2e-09 67.4 78 39.7
PSO478G3301 Papaver somniferum HOM05D000004 ORTHO05D000002 1.2e-09 67.4 82 36.6
AUR62026940 Chenopodium quinoa HOM05D000004 ORTHO05D000002 1.6e-09 67.0 65 43.1
PSO063G2903 Papaver somniferum HOM05D000004 ORTHO05D000002 1.6e-09 67.0 82 36.6
PSO210G7018 Papaver somniferum HOM05D000004 ORTHO05D000002 1.6e-09 67.0 82 32.9
Ah.01g010230 Amaranthus hybridus HOM05D000004 ORTHO05D017249 2.0e-09 66.6 140 28.6
PSO339G1607 Papaver somniferum HOM05D000004 ORTHO05D000002 2.0e-09 66.6 99 30.3
PSO063G4083 Papaver somniferum HOM05D000004 ORTHO05D000002 2.7e-09 66.2 79 34.2
PSO063G4254 Papaver somniferum HOM05D000004 ORTHO05D000002 2.7e-09 66.2 73 35.6
PSO170G4770 Papaver somniferum HOM05D000004 ORTHO05D000002 2.7e-09 66.2 82 32.9
PSO384G1135 Papaver somniferum HOM05D000004 ORTHO05D000002 2.7e-09 66.2 82 36.6
PSO675G0415 Papaver somniferum HOM05D000004 ORTHO05D000002 2.7e-09 66.2 82 31.7
PSO700G0335 Papaver somniferum HOM05D000004 ORTHO05D000002 2.7e-09 66.2 85 37.6
Ah.07g201970 Amaranthus hybridus HOM05D000004 ORTHO05D000002 3.5e-09 65.9 149 26.8
Oeu064723.1 Olea europaea HOM05D016274 ORTHO05D017141 3.5e-09 65.9 76 38.2
PSO017G3809 Papaver somniferum HOM05D000004 ORTHO05D000002 3.5e-09 65.9 82 32.9
Sabra10G0044500 Salix brachista HOM05D000075 ORTHO05D000002 3.5e-09 65.9 135 28.9
PSO339G1921 Papaver somniferum HOM05D000004 ORTHO05D000002 4.6e-09 65.5 94 34.0
PSO541G1232 Papaver somniferum HOM05D000004 ORTHO05D000002 4.6e-09 65.5 84 34.5
PSO782G2672 Papaver somniferum HOM05D000004 ORTHO05D000002 4.6e-09 65.5 82 36.6
Hma1.2p1_0540F.1_g174670 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 5.9e-09 65.1 82 34.1
Lj8C91T3 Lonicera japonica HOM05D000004 ORTHO05D000002 5.9e-09 65.1 106 34.0
PSO017G2783 Papaver somniferum HOM05D000004 ORTHO05D000002 5.9e-09 65.1 82 30.5
PSO063G0124 Papaver somniferum HOM05D000004 ORTHO05D000002 5.9e-09 65.1 83 32.5
PSO170G3746 Papaver somniferum HOM05D000004 ORTHO05D000002 5.9e-09 65.1 76 32.9
PSO339G1576 Papaver somniferum HOM05D000004 ORTHO05D000002 5.9e-09 65.1 109 25.7
Hma1.2p1_0445F.1_g154130 Hydrangea macrophylla HOM05D000004 ORTHO05D000002 7.8e-09 64.7 79 31.6
Sopen08g011500 Solanum pennellii HOM05D000004 ORTHO05D000002 7.8e-09 64.7 107 37.4
Ah.04g157740 Amaranthus hybridus HOM05D000004 ORTHO05D000002 1.0e-08 64.3 83 36.1
PSO541G3547 Papaver somniferum HOM05D000004 ORTHO05D000002 1.0e-08 64.3 82 32.9
PSO782G2503 Papaver somniferum HOM05D000004 ORTHO05D000002 1.0e-08 64.3 82 30.5
AUR62007521 Chenopodium quinoa HOM05D000004 ORTHO05D000002 1.3e-08 63.9 85 36.5
PSO063G2309 Papaver somniferum HOM05D000004 ORTHO05D000002 1.7e-08 63.5 93 32.3
PSO063G2638 Papaver somniferum HOM05D000004 ORTHO05D000002 1.7e-08 63.5 83 34.9
PSO170G5728 Papaver somniferum HOM05D000004 ORTHO05D000002 1.7e-08 63.5 99 27.3
PSO339G0831 Papaver somniferum HOM05D000004 ORTHO05D000002 1.7e-08 63.5 82 29.3
PSO461G0041 Papaver somniferum HOM05D000004 ORTHO05D000002 1.7e-08 63.5 82 31.7
PSO675G3155 Papaver somniferum HOM05D000004 ORTHO05D000002 1.7e-08 63.5 82 30.5
PSO675G6766 Papaver somniferum HOM05D000004 ORTHO05D000002 1.7e-08 63.5 82 31.7
Ah.08g220400 Amaranthus hybridus HOM05D000004 ORTHO05D000002 2.3e-08 63.2 83 36.1
AUR62003126 Chenopodium quinoa HOM05D000004 ORTHO05D000002 2.3e-08 63.2 94 35.1
AUR62042688 Chenopodium quinoa HOM05D000004 ORTHO05D000002 2.3e-08 63.2 84 35.7
PSO478G0834 Papaver somniferum HOM05D000004 ORTHO05D000002 2.3e-08 63.2 82 34.1
PSO782G3295 Papaver somniferum HOM05D000004 ORTHO05D000002 2.3e-08 63.2 171 24.6
PSO782G4520 Papaver somniferum HOM05D000004 ORTHO05D000002 2.3e-08 63.2 164 28.0
Sabra06G0095200 Salix brachista HOM05D002585 ORTHO05D002917 2.3e-08 63.2 108 30.6
AUR62029366 Chenopodium quinoa HOM05D000004 ORTHO05D000002 3.0e-08 62.8 83 34.9
PSO801G0540 Papaver somniferum HOM05D000004 ORTHO05D000002 3.0e-08 62.8 82 34.1
Ah.14g081330 Amaranthus hybridus HOM05D000004 ORTHO05D000002 3.9e-08 62.4 83 33.7
Ah.03g143850 Amaranthus hybridus HOM05D000004 ORTHO05D000002 5.0e-08 62.0 83 33.7
Ah.16g109500 Amaranthus hybridus HOM05D000004 ORTHO05D000002 5.0e-08 62.0 105 30.5
AUR62024222 Chenopodium quinoa HOM05D000004 ORTHO05D017249 5.0e-08 62.0 73 39.7
ECA232G1984 Erigeron canadensis HOM05D000004 ORTHO05D000002 5.0e-08 62.0 90 35.6
PSO111G0026 Papaver somniferum HOM05D000004 ORTHO05D000002 5.0e-08 62.0 82 35.4
PSO455G0227 Papaver somniferum HOM05D000004 ORTHO05D000002 5.0e-08 62.0 82 36.6
PSO675G3806 Papaver somniferum HOM05D000004 ORTHO05D000002 5.0e-08 62.0 80 33.8
Sopen00g004920 Solanum pennellii HOM05D000004 ORTHO05D000002 5.0e-08 62.0 72 38.9
AUR62037448 Chenopodium quinoa HOM05D000004 ORTHO05D000002 6.6e-08 61.6 83 34.9
Nn2g12379 Nelumbo nucifera HOM05D000004 ORTHO05D000002 6.6e-08 61.6 78 34.6
PSO063G3877 Papaver somniferum HOM05D000004 ORTHO05D000002 8.6e-08 61.2 82 30.5
PSO478G3389 Papaver somniferum HOM05D000004 ORTHO05D000002 8.6e-08 61.2 82 30.5
VMungo0647G0036 Vigna mungo HOM05D001600 ORTHO05D001502 8.6e-08 61.2 96 36.5
Nitab4.5_0006851g0020 Nicotiana tabacum HOM05D010703 ORTHO05D014545 1.1e-07 60.8 152 26.3
PSO675G5638 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-07 60.8 85 28.2
PSO675G8662 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-07 60.8 139 21.6
PSO675G9204 Papaver somniferum HOM05D000004 ORTHO05D000002 1.1e-07 60.8 82 29.3
Sopen08g014180 Solanum pennellii HOM05D000004 ORTHO05D000002 1.1e-07 60.8 37 70.3
PSO063G1275 Papaver somniferum HOM05D000004 ORTHO05D000002 1.5e-07 60.5 82 34.1
PSO210G0641 Papaver somniferum HOM05D000004 ORTHO05D000002 1.5e-07 60.5 93 31.2
COL.COLO4_19395 Corchorus olitorius HOM05D000004 ORTHO05D000002 1.9e-07 60.1 104 29.8
Lju41C59T6 Lonicera japonica HOM05D000004 ORTHO05D000002 1.9e-07 60.1 161 28.6
PSO478G0477 Papaver somniferum HOM05D000004 ORTHO05D000002 1.9e-07 60.1 82 31.7
VMungo0720G2098 Vigna mungo HOM05D004618 ORTHO05D005318 1.9e-07 60.1 85 35.3
ECA234G4583 Erigeron canadensis HOM05D000004 ORTHO05D000002 2.5e-07 59.7 73 37.0
AUR62029367 Chenopodium quinoa HOM05D000004 ORTHO05D000002 3.3e-07 59.3 83 34.9
Manes.14G155101 Manihot esculenta HOM05D016502 ORTHO05D019286 3.3e-07 59.3 83 34.9
Oeu021115.1 Olea europaea HOM05D016274 ORTHO05D017141 3.3e-07 59.3 62 43.5
AUR62044430 Chenopodium quinoa HOM05D002361 ORTHO05D000002 4.3e-07 58.9 67 35.8
ECA240G3730 Erigeron canadensis HOM05D000004 ORTHO05D000002 4.3e-07 58.9 73 37.0
Psat2g059760 Pisum sativum HOM05D000004 ORTHO05D000002 4.3e-07 58.9 79 31.6
AUR62013530 Chenopodium quinoa HOM05D000004 ORTHO05D000002 5.6e-07 58.5 65 36.9
Lj9C387T1 Lonicera japonica HOM05D000004 ORTHO05D000002 5.6e-07 58.5 81 34.6
Sopen04g007300 Solanum pennellii HOM05D000004 ORTHO05D000002 7.3e-07 58.2 76 35.5
PSO541G4684 Papaver somniferum HOM05D000004 ORTHO05D000002 9.5e-07 57.8 82 34.1
Ca_12114_v3 Cicer arietinum L. HOM05D003122 ORTHO05D010195 1.2e-06 57.4 130 26.9
CSS0007557 Camellia sinensis var. sinensis HOM05D000004 ORTHO05D000002 1.6e-06 57.0 114 29.8
ECA246G0443 Erigeron canadensis HOM05D000004 ORTHO05D000002 1.6e-06 57.0 90 34.4
Lj4C52T7 Lonicera japonica HOM05D000004 ORTHO05D000002 2.1e-06 56.6 82 31.7
PSO063G3333 Papaver somniferum HOM05D000004 ORTHO05D000002 2.1e-06 56.6 77 31.2
Psat1g201560 Pisum sativum HOM05D000004 ORTHO05D000002 2.1e-06 56.6 79 30.4
Sabra09G0078600 Salix brachista HOM05D000004 ORTHO05D000002 2.1e-06 56.6 72 33.3
Sabra10G0166600 Salix brachista HOM05D000004 ORTHO05D000002 2.1e-06 56.6 72 33.3
TAR481G0005 Trochodendron aralioides HOM05D000004 ORTHO05D000002 2.1e-06 56.6 71 29.6
Atru.chr2.2548 Acer truncatum HOM05D003506 ORTHO05D004063 2.8e-06 56.2 82 31.7
Ah.16g105440 Amaranthus hybridus HOM05D000004 ORTHO05D000002 2.8e-06 56.2 65 36.9
Nn1g04221 Nelumbo nucifera HOM05D000004 ORTHO05D000002 2.8e-06 56.2 76 32.9
PGSC0003DMG401028522 Solanum tuberosum HOM05D010154 ORTHO05D010293 2.8e-06 56.2 67 34.3
THA.LOC104801707 Tarenaya hassleriana HOM05D008905 ORTHO05D000002 2.8e-06 56.2 80 36.2
VMungo1080G0040 Vigna mungo HOM05D003438 ORTHO05D000002 2.8e-06 56.2 73 39.7
BcaC07g37276 Brassica carinata HOM05D008905 ORTHO05D000002 3.6e-06 55.8 72 33.3
Lj2C32T8 Lonicera japonica HOM05D000004 ORTHO05D000002 3.6e-06 55.8 81 33.3
Lj2P695T11 Lonicera japonica HOM05D000004 ORTHO05D000002 3.6e-06 55.8 81 33.3
PSO724G0511 Papaver somniferum HOM05D000004 ORTHO05D000002 3.6e-06 55.8 82 32.9
PGSC0003DMG400039077 Solanum tuberosum HOM05D018515 ORTHO05D002107 3.6e-06 55.8 39 69.2
Ah.02g124620 Amaranthus hybridus HOM05D013246 ORTHO05D000002 4.7e-06 55.5 70 34.3
MELO3C002493.2 Cucumis melo HOM05D000004 ORTHO05D000002 4.7e-06 55.5 99 33.3
Manes.08G071733 Manihot esculenta HOM05D000004 ORTHO05D000002 6.2e-06 55.1 76 36.8
PSO170G5011 Papaver somniferum HOM05D000004 ORTHO05D000002 6.2e-06 55.1 147 26.5
PSO384G4983 Papaver somniferum HOM05D000004 ORTHO05D000002 6.2e-06 55.1 50 40.0
Ca_27418_v3 Cicer arietinum L. HOM05D003122 ORTHO05D000002 8.0e-06 54.7 73 37.0
ECA246G3805 Erigeron canadensis HOM05D000004 ORTHO05D000002 8.0e-06 54.7 90 33.3
Manes.16G136150 Manihot esculenta HOM05D016502 ORTHO05D002107 8.0e-06 54.7 131 30.5
vmacro07154 Vaccinium macrocarpon HOM05D002389 ORTHO05D003227 8.0e-06 54.7 159 26.4


User provided reference genes

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