Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1635.18 Capsicum annuum HOM05D010719 ORTHO05D012345 6.0e-56 220.7 120 100.0
CAN.G929.28 Capsicum annuum HOM05D010719 ORTHO05D012345 6.3e-45 184.1 101 92.1
PGSC0003DMG400010154 Solanum tuberosum HOM05D010719 ORTHO05D012345 3.4e-43 178.3 122 82.0
Solyc03g098490.1 Solanum lycopersicum HOM05D010719 ORTHO05D012345 9.4e-41 170.2 121 72.7
Sopen03g029230 Solanum pennellii HOM05D010719 ORTHO05D012345 1.2e-40 169.9 120 72.5
Nitab4.5_0006956g0010 Nicotiana tabacum HOM05D010719 ORTHO05D012345 2.6e-38 162.2 124 67.7
Peaxi162Scf00171g10029 Petunia axillaris HOM05D010719 ORTHO05D012345 2.2e-37 159.1 122 66.4
Nitab4.5_0000782g0170 Nicotiana tabacum HOM05D010719 ORTHO05D012345 9.1e-36 153.7 125 65.6
Peaxi162Scf00171g00031 Petunia axillaris HOM05D010719 ORTHO05D012345 2.5e-33 145.6 124 63.7
Oeu034432.1 Olea europaea HOM05D010719 ORTHO05D012345 3.7e-21 105.1 124 48.4
CAN.G929.29 Capsicum annuum HOM05D010719 ORTHO05D012345 5.3e-20 101.3 81 70.4
Solyc03g098480.1 Solanum lycopersicum HOM05D010719 ORTHO05D012345 1.6e-19 99.8 81 69.1
Sopen03g029220 Solanum pennellii HOM05D010719 ORTHO05D012345 1.6e-19 99.8 81 69.1
Oeu016050.1 Olea europaea HOM05D001640 ORTHO05D012345 3.5e-19 98.6 120 47.5
PGSC0003DMG400010155 Solanum tuberosum HOM05D010719 ORTHO05D012345 3.8e-18 95.1 80 67.5
Nitab4.5_0004612g0020 Nicotiana tabacum HOM05D010719 ORTHO05D012345 5.0e-18 94.7 81 66.7
Cc04_g08580 Coffea canephora HOM05D001640 ORTHO05D012345 5.7e-14 81.3 112 46.4
Lj5P167T28 Lonicera japonica HOM05D010719 ORTHO05D012345 4.8e-13 78.2 96 45.8
MBI03_g13831_MAGBIO Magnolia biondii HOM05D001640 ORTHO05D001612 8.3e-13 77.4 117 42.7
SGA_v2.0_scaffold90G27760 Striga asiatica HOM05D010719 ORTHO05D012345 3.1e-12 75.5 107 42.1
Migut.D02062 Erythranthe guttata HOM05D001640 ORTHO05D001612 4.1e-12 75.1 124 41.9
SalBow5G1491 Salvia bowleyana HOM05D001640 ORTHO05D012345 5.4e-12 74.7 129 41.1
TAR629G3218 Trochodendron aralioides HOM05D001640 ORTHO05D001612 7.0e-12 74.3 122 42.6
TAR371G1285 Trochodendron aralioides HOM05D001640 ORTHO05D001612 1.7e-10 69.7 121 42.1
Dinv06414 Davidia involucrata HOM05D001640 ORTHO05D001612 2.3e-10 69.3 97 47.4
Oeu023548.1 Olea europaea HOM05D010719 ORTHO05D012345 1.1e-09 67.0 82 47.6
Phvul.004G141400 Phaseolus vulgaris HOM05D001640 ORTHO05D001612 4.2e-09 65.1 123 40.7
DCAR_008703 Daucus carota HOM05D001640 ORTHO05D001612 5.5e-09 64.7 128 35.9
DCAR_014747 Daucus carota HOM05D001640 ORTHO05D001612 5.5e-09 64.7 95 42.1
Glyma.16G215800 Glycine max HOM05D001640 ORTHO05D001612 5.5e-09 64.7 122 41.8
Lalb_Chr14g0370311 Lupinus albus HOM05D001640 ORTHO05D001612 5.5e-09 64.7 117 40.2
Glyma.09G165900 Glycine max HOM05D001640 ORTHO05D001612 9.5e-09 63.9 122 41.0
VMungo0464G0664 Vigna mungo HOM05D001640 ORTHO05D001612 9.5e-09 63.9 111 43.2
Manes.16G063300 Manihot esculenta HOM05D001640 ORTHO05D001612 1.2e-08 63.5 119 40.3
TPR.G19885 Trifolium pratense HOM05D001640 ORTHO05D001612 1.2e-08 63.5 122 37.7
DCAR_023250 Daucus carota HOM05D001640 ORTHO05D001612 1.6e-08 63.2 117 35.9
Manes.03G067600 Manihot esculenta HOM05D001640 ORTHO05D001612 2.1e-08 62.8 101 42.6
Ciclev10021576m.g Citrus clementina HOM05D001640 ORTHO05D001612 2.8e-08 62.4 111 40.5
Cpa.g.sc111.33 Carica papaya HOM05D001640 ORTHO05D001612 4.7e-08 61.6 111 38.7
TPR.G2580 Trifolium pratense HOM05D001640 ORTHO05D001612 6.1e-08 61.2 111 38.7
Zm00001eb106950 Zea mays HOM05D001640 ORTHO05D001612 6.1e-08 61.2 124 37.9
Lalb_Chr24g0398511 Lupinus albus HOM05D001640 ORTHO05D001612 8.0e-08 60.8 118 37.3
TAR626G0635 Trochodendron aralioides HOM05D001640 ORTHO05D001612 8.0e-08 60.8 123 39.0
CAN.G162.103 Capsicum annuum HOM05D001640 ORTHO05D001612 1.8e-07 59.7 127 37.0
Medtr6g080650 Medicago truncatula HOM05D001640 ORTHO05D001612 1.8e-07 59.7 113 39.8
arahy.Tifrunner.gnm1.ann1.DQYB4L Arachis hypogaea HOM05D001640 ORTHO05D001612 2.3e-07 59.3 116 37.9
arahy.Tifrunner.gnm1.ann1.WL96AD Arachis hypogaea HOM05D001640 ORTHO05D001612 2.3e-07 59.3 116 37.9
Migut.G00597 Erythranthe guttata HOM05D010719 ORTHO05D012345 4.0e-07 58.5 77 42.9
PSO063G6251 Papaver somniferum HOM05D001640 ORTHO05D001612 5.2e-07 58.2 127 36.2
Zm00001eb324310 Zea mays HOM05D001640 ORTHO05D001612 5.2e-07 58.2 122 37.7
Psat1g121240 Pisum sativum HOM05D001640 ORTHO05D001612 6.8e-07 57.8 126 35.7
vmacro11814 Vaccinium macrocarpon HOM05D001640 ORTHO05D001612 6.8e-07 57.8 126 38.9
MD14G1244900 Malus domestica HOM05D001640 ORTHO05D001612 1.2e-06 57.0 135 34.8
Nn1g06744 Nelumbo nucifera HOM05D001640 ORTHO05D001612 1.2e-06 57.0 125 34.4
CANSAT64G1354 Cannabis sativa HOM05D001640 ORTHO05D001612 1.5e-06 56.6 128 35.9
Lsat_1_v5_gn_7_19801 Lactuca sativa HOM05D001640 ORTHO05D001612 1.5e-06 56.6 146 36.3
Sabra12G0025500 Salix brachista HOM05D001640 ORTHO05D001612 1.5e-06 56.6 93 41.9
CANSAT11G1358 Cannabis sativa HOM05D001640 ORTHO05D001612 2.0e-06 56.2 125 34.4
PGR083G2642 Punica granatum HOM05D001640 ORTHO05D001612 2.0e-06 56.2 129 35.7
Eucgr.K02310 Eucalyptus grandis HOM05D001640 ORTHO05D001612 2.6e-06 55.8 109 37.6
Lj2A282T46 Lonicera japonica HOM05D001640 ORTHO05D001612 3.4e-06 55.5 127 36.2
Nn7g36083 Nelumbo nucifera HOM05D001640 ORTHO05D001612 3.4e-06 55.5 125 33.6
PSO210G0930 Papaver somniferum HOM05D001640 ORTHO05D001612 3.4e-06 55.5 126 36.5
Prupe.4G189800 Prunus persica HOM05D001640 ORTHO05D001612 4.4e-06 55.1 118 38.1
Sopen07g031740 Solanum pennellii HOM05D001640 ORTHO05D001612 4.4e-06 55.1 127 34.6
TWI39G0097 Tripterygium wilfordii HOM05D001640 ORTHO05D001612 4.4e-06 55.1 116 36.2
Haze_18384 Corylus avellana HOM05D001640 ORTHO05D001612 5.7e-06 54.7 116 37.9
MD06G1238700 Malus domestica HOM05D001640 ORTHO05D001612 5.7e-06 54.7 135 33.3
PSO782G0998 Papaver somniferum HOM05D001640 ORTHO05D001612 5.7e-06 54.7 129 34.9
Cfa017826 Carpinus fangiana HOM05D001640 ORTHO05D001612 7.5e-06 54.3 113 36.3
Medtr6g080600 Medicago truncatula HOM05D001640 ORTHO05D001612 7.5e-06 54.3 112 37.5
Solyc07g063560.4 Solanum lycopersicum HOM05D001640 ORTHO05D001612 7.5e-06 54.3 127 34.6
Peaxi162Scf01216g00045 Petunia axillaris HOM05D001640 ORTHO05D001612 9.8e-06 53.9 124 33.9
Prupe.5G242600 Prunus persica HOM05D001640 ORTHO05D001612 9.8e-06 53.9 145 32.4
Sabra15G0023900 Salix brachista HOM05D001640 ORTHO05D001612 9.8e-06 53.9 60 48.3


User provided reference genes

Program Settings