Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G163.9 Capsicum annuum HOM05D006087 ORTHO05D007479 1.4e-50 202.6 100 100.0
PGSC0003DMG400014051 Solanum tuberosum HOM05D006087 ORTHO05D007479 1.2e-44 183.0 98 93.9
Solyc05g015470.1 Solanum lycopersicum HOM05D006087 ORTHO05D007479 2.2e-43 178.7 98 91.8
Sopen05g010780 Solanum pennellii HOM05D006087 ORTHO05D007479 2.2e-43 178.7 98 91.8
Nitab4.5_0001808g0020 Nicotiana tabacum HOM05D006087 ORTHO05D007479 3.6e-38 161.4 98 86.7
TWI75G0102 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 3.6e-38 161.4 101 80.2
THA.LOC104812595 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 1.4e-37 159.5 102 78.4
Oeu036868.1 Olea europaea HOM05D006087 ORTHO05D007479 5.2e-37 157.5 102 80.4
Eucgr.B03495 Eucalyptus grandis HOM05D006087 ORTHO05D007479 6.8e-37 157.1 98 82.7
Nitab4.5_0000039g0180 Nicotiana tabacum HOM05D006087 ORTHO05D007479 8.9e-37 156.8 98 83.7
TWI18G0911 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 3.4e-36 154.8 101 76.2
TAR374G1631 Trochodendron aralioides HOM05D006087 ORTHO05D007479 3.4e-36 154.8 102 77.5
Sp2g08050 Schrenkiella parvula HOM05D006087 ORTHO05D007479 5.8e-36 154.1 99 75.8
TWI36G1569 Tripterygium wilfordii HOM05D006087 ORTHO05D007479 7.6e-36 153.7 98 78.6
Ciclev10033174m.g Citrus clementina HOM05D006087 ORTHO05D007479 1.3e-35 152.9 102 77.5
Lalb_Chr12g0206161 Lupinus albus HOM05D006087 ORTHO05D007479 1.3e-35 152.9 102 74.5
Cc11_g16920 Coffea canephora HOM05D006087 ORTHO05D007479 1.7e-35 152.5 97 77.3
Atru.chr11.2326 Acer truncatum HOM05D006087 ORTHO05D007479 2.9e-35 151.8 102 76.5
A09p20220 Brassica napus HOM05D006087 ORTHO05D007479 3.8e-35 151.4 99 73.7
SGA_v2.0_scaffold9G04680 Striga asiatica HOM05D006087 ORTHO05D007479 3.8e-35 151.4 102 73.5
unitig_749.g13305 Utricularia gibba HOM05D006087 ORTHO05D007479 6.4e-35 150.6 98 77.6
A06p47950 Brassica napus HOM05D006087 ORTHO05D007479 8.4e-35 150.2 99 73.7
C07p25860 Brassica napus HOM05D006087 ORTHO05D007479 8.4e-35 150.2 99 73.7
BolC7t43103H Brassica oleracea HOM05D006087 ORTHO05D007479 8.4e-35 150.2 99 73.7
BraA06t27665Z Brassica rapa HOM05D006087 ORTHO05D007479 8.4e-35 150.2 99 73.7
Carub.0008s0544 Capsella rubella HOM05D006087 ORTHO05D007479 1.9e-34 149.1 99 72.7
BcaC04g21941 Brassica carinata HOM05D006087 ORTHO05D007479 2.4e-34 148.7 99 72.7
C09p25630 Brassica napus HOM05D006087 ORTHO05D007479 2.4e-34 148.7 99 72.7
BolC9t55466H Brassica oleracea HOM05D006087 ORTHO05D007479 2.4e-34 148.7 99 72.7
BraA09t37633Z Brassica rapa HOM05D006087 ORTHO05D007479 3.2e-34 148.3 99 72.7
Ah.03g136140 Amaranthus hybridus HOM05D006087 ORTHO05D007479 4.2e-34 147.9 101 71.3
TAR622G0081 Trochodendron aralioides HOM05D006087 ORTHO05D007479 4.2e-34 147.9 97 78.4
AT5G43260 Arabidopsis thaliana HOM05D006087 ORTHO05D007479 9.2e-34 146.7 99 71.7
AL8G17230 Arabidopsis lyrata HOM05D006087 ORTHO05D007479 1.2e-33 146.4 99 70.7
CiPaw.05G109600 Carya illinoinensis HOM05D006087 ORTHO05D007479 1.2e-33 146.4 98 75.5
QL03p052667 Quercus lobata HOM05D006087 ORTHO05D007479 1.2e-33 146.4 99 75.8
Aa31LG9G13330 Aethionema arabicum HOM05D006087 ORTHO05D007479 2.1e-33 145.6 99 74.7
BcaB07g31021 Brassica carinata HOM05D006087 ORTHO05D007479 2.7e-33 145.2 99 70.7
Lsat_1_v5_gn_4_3481 Lactuca sativa HOM05D006087 ORTHO05D007479 2.7e-33 145.2 101 73.3
COL.COLO4_20404 Corchorus olitorius HOM05D006087 ORTHO05D007479 3.5e-33 144.8 103 76.7
Oeu004448.1 Olea europaea HOM05D006087 ORTHO05D007479 3.5e-33 144.8 102 74.5
Duzib248G0070 Durio zibethinus HOM05D006087 ORTHO05D007479 4.6e-33 144.4 103 74.8
Glyma.18G006400 Glycine max HOM05D006087 ORTHO05D007479 1.0e-32 143.3 99 71.7
CANSAT01G2640 Cannabis sativa HOM05D006087 ORTHO05D007479 1.3e-32 142.9 98 75.5
ECA233G2512 Erigeron canadensis HOM05D006443 ORTHO05D007797 1.3e-32 142.9 83 78.3
Potri.001G056601 Populus trichocarpa HOM05D006087 ORTHO05D007479 1.3e-32 142.9 102 74.5
Thecc.02G208200 Theobroma cacao HOM05D006087 ORTHO05D007479 1.3e-32 142.9 103 74.8
Lj4g0011842 Lotus japonicus HOM05D006087 ORTHO05D007479 1.7e-32 142.5 99 71.7
Glyma.11G250700 Glycine max HOM05D006087 ORTHO05D007479 2.3e-32 142.1 99 70.7
EL10Ac6g13503 Beta vulgaris HOM05D006087 ORTHO05D007479 3.0e-32 141.7 97 71.1
MELO3C011864.2 Cucumis melo HOM05D006087 ORTHO05D007479 3.0e-32 141.7 98 73.5
Phvul.001G262000 Phaseolus vulgaris HOM05D006087 ORTHO05D007479 3.0e-32 141.7 102 68.6
MD16G1119600 Malus domestica HOM05D006087 ORTHO05D007479 3.9e-32 141.4 97 72.2
Manes.12G011100 Manihot esculenta HOM05D006087 ORTHO05D007479 3.9e-32 141.4 102 71.6
Actinidia20712 Actinidia chinensis HOM05D006087 ORTHO05D007479 8.7e-32 140.2 98 73.5
MD13G1119200 Malus domestica HOM05D006087 ORTHO05D007479 8.7e-32 140.2 97 74.2
HanXRQChr10g0310621 Helianthus annuus HOM05D006087 ORTHO05D007479 1.1e-31 139.8 94 73.4
Hma1.2p1_0065F.1_g035460 Hydrangea macrophylla HOM05D006087 ORTHO05D007479 1.5e-31 139.4 102 72.5
Sc04g0010140 Simmondsia chinensis HOM05D006087 ORTHO05D007479 1.5e-31 139.4 98 72.4
Cfa009371 Carpinus fangiana HOM05D006087 ORTHO05D007479 1.9e-31 139.0 102 71.6
Haze_12421 Corylus avellana HOM05D006087 ORTHO05D007479 1.9e-31 139.0 102 71.6
FAN17G2012 Fragaria x ananassa HOM05D006087 ORTHO05D007479 1.9e-31 139.0 97 71.1
CiPaw.06G102800 Carya illinoinensis HOM05D006087 ORTHO05D007479 2.5e-31 138.7 102 70.6
CsaV3_5G030260 Cucumis sativus L. HOM05D006087 ORTHO05D007479 2.5e-31 138.7 98 73.5
Duzib251G0251 Durio zibethinus HOM05D006087 ORTHO05D007479 2.5e-31 138.7 101 74.3
CARHR180610 Cardamine hirsuta HOM05D006087 ORTHO05D007479 3.3e-31 138.3 99 68.7
Gohir.D12G152800 Gossypium hirsutum HOM05D006087 ORTHO05D007479 3.3e-31 138.3 101 72.3
Gorai.008G165300 Gossypium raimondii HOM05D006087 ORTHO05D007479 3.3e-31 138.3 101 72.3
FAN07G1634 Fragaria x ananassa HOM05D006087 ORTHO05D007479 4.3e-31 137.9 97 70.1
FAN22G0702 Fragaria x ananassa HOM05D006087 ORTHO05D007479 4.3e-31 137.9 97 70.1
THA.LOC104820522 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 4.3e-31 137.9 102 71.6
FAN12G1341 Fragaria x ananassa HOM05D006087 ORTHO05D007479 5.6e-31 137.5 97 70.1
FAN12G1854 Fragaria x ananassa HOM05D006087 ORTHO05D007479 5.6e-31 137.5 97 70.1
RcHm_v2.0_Chr4g0430231 Rosa chinensis HOM05D006087 ORTHO05D007479 7.3e-31 137.1 97 70.1
Prupe.1G225600 Prunus persica HOM05D006087 ORTHO05D007479 1.6e-30 136.0 96 75.0
Gohir.D04G182800 Gossypium hirsutum HOM05D006087 ORTHO05D007479 2.8e-30 135.2 103 69.9
Gorai.012G175800 Gossypium raimondii HOM05D006087 ORTHO05D007479 2.8e-30 135.2 103 69.9
Ah.02g130900 Amaranthus hybridus HOM05D006087 ORTHO05D007479 3.6e-30 134.8 97 67.0
PSO017G6027 Papaver somniferum HOM05D006087 ORTHO05D007479 4.8e-30 134.4 98 72.4
PSO478G2574 Papaver somniferum HOM05D006087 ORTHO05D007479 4.8e-30 134.4 98 72.4
Gohir.A12G148826 Gossypium hirsutum HOM05D006087 ORTHO05D007479 8.1e-30 133.7 101 71.3
Gohir.A04G139600 Gossypium hirsutum HOM05D006087 ORTHO05D007479 1.4e-29 132.9 103 69.9
Psat5g096360 Pisum sativum HOM05D006087 ORTHO05D007479 1.8e-29 132.5 102 67.6
Potri.003G171800 Populus trichocarpa HOM05D006087 ORTHO05D007479 3.1e-29 131.7 99 71.7
Cpa.g.sc43.59 Carica papaya HOM05D006087 ORTHO05D007479 6.9e-29 130.6 102 69.6
Migut.K00735 Erythranthe guttata HOM05D006087 ORTHO05D007479 9.0e-29 130.2 102 66.7
Ca_16458_v3 Cicer arietinum L. HOM05D006087 ORTHO05D007479 1.2e-28 129.8 102 66.7
CDE02G3899 Ceratophyllum demersum HOM05D006087 ORTHO05D007479 1.5e-28 129.4 100 66.0
Duzib268G0474 Durio zibethinus HOM05D006087 ORTHO05D007479 1.5e-28 129.4 101 68.3
ECA234G0111 Erigeron canadensis HOM05D006087 ORTHO05D007479 1.5e-28 129.4 89 71.9
Medtr3g085300 Medicago truncatula HOM05D006087 ORTHO05D007479 2.6e-28 128.6 102 63.7
TPR.G17782 Trifolium pratense HOM05D006087 ORTHO05D007479 3.4e-28 128.3 102 64.7
Aqoxy5G03370 Aquilegia oxysepala HOM05D006087 ORTHO05D007479 4.4e-28 127.9 88 73.9
PGR102G3303 Punica granatum HOM05D006087 ORTHO05D007479 7.6e-28 127.1 97 68.0
ATR0561G204 Amborella trichopoda HOM05D006087 ORTHO05D007479 8.4e-27 123.6 95 68.4
THA.LOC104825505 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 8.4e-27 123.6 100 67.0
AUR62005621 Chenopodium quinoa HOM05D006087 ORTHO05D007479 1.1e-26 123.2 101 61.4
Rhsim12G0025700 Rhododendron simsii HOM05D006087 ORTHO05D007479 1.1e-26 123.2 99 66.7
THA.LOC104807129 Tarenaya hassleriana HOM05D006087 ORTHO05D007479 1.4e-26 122.9 100 66.0
MSTRG.8005 Avicennia marina HOM05D006087 ORTHO05D007479 4.2e-26 121.3 99 66.7
AUR62028927 Chenopodium quinoa HOM05D006087 ORTHO05D007479 5.4e-26 120.9 101 61.4
MELO3C010741.2 Cucumis melo HOM05D006087 ORTHO05D007479 7.1e-26 120.6 99 63.6
Migut.E00016 Erythranthe guttata HOM05D006087 ORTHO05D007479 2.7e-25 118.6 98 62.2
CSS0016505 Camellia sinensis var. sinensis HOM05D006087 ORTHO05D007479 4.6e-25 117.9 87 72.4
CSS0027394 Camellia sinensis var. sinensis HOM05D006087 ORTHO05D007479 4.6e-25 117.9 87 72.4
Lalb_Chr23g0278081 Lupinus albus HOM05D006087 ORTHO05D007479 8.7e-24 113.6 102 61.8
arahy.Tifrunner.gnm1.ann1.1Z01XL Arachis hypogaea HOM05D006087 ORTHO05D007479 4.8e-22 107.8 104 56.7
MBI11_g44422_MAGBIO Magnolia biondii HOM05D006087 ORTHO05D007479 4.8e-22 107.8 96 61.5
Pp3c22_5660 Physcomitrium patens HOM05D006087 ORTHO05D007479 8.1e-22 107.1 102 56.9
Sed0007875 Sechium edule HOM05D006087 ORTHO05D007479 1.8e-21 105.9 99 54.5
MD05G1114700 Malus domestica HOM05D006087 ORTHO05D007479 2.4e-21 105.5 83 68.7
Mapoly0062s0032 Marchantia polymorpha HOM05D006087 ORTHO05D007479 1.5e-20 102.8 92 55.4
Pp3c21_520 Physcomitrium patens HOM05D006087 ORTHO05D007479 5.8e-20 100.9 96 55.2
ClCG08G017160 Citrullus lanatus HOM05D006087 ORTHO05D007479 7.6e-20 100.5 99 55.6
Pp3c18_21810 Physcomitrium patens HOM05D006087 ORTHO05D007479 1.3e-19 99.8 104 55.8
Pp3c14_11460 Physcomitrium patens HOM05D006087 ORTHO05D007479 2.9e-19 98.6 105 53.3
HPP92_024290 Vanilla planifolia HOM05D006087 ORTHO05D007479 2.9e-19 98.6 87 59.8
HPP92_024307 Vanilla planifolia HOM05D006087 ORTHO05D007479 2.9e-19 98.6 86 59.3
CsaV3_2G025430 Cucumis sativus L. HOM05D006087 ORTHO05D007479 5.4e-18 94.4 81 61.7
MBI11_g05327_MAGBIO Magnolia biondii HOM05D006087 ORTHO05D007479 7.1e-18 94.0 73 67.1
Hma1.2p1_0349F.1_g132260 Hydrangea macrophylla HOM05D006087 ORTHO05D007479 2.1e-17 92.4 102 58.8
Pp3c17_7480 Physcomitrium patens HOM05D006087 ORTHO05D007479 2.7e-17 92.0 103 49.5
Os02g0506600 Oryza sativa ssp. japonica HOM05D006087 ORTHO05D007479 3.3e-15 85.1 103 43.7
Zm00001eb241730 Zea mays HOM05D006087 ORTHO05D007479 9.6e-15 83.6 93 41.9
Zm00001eb180950 Zea mays HOM05D006087 ORTHO05D007479 5.3e-13 77.8 98 39.8
Zm00001eb421040 Zea mays HOM05D006087 ORTHO05D007479 4.2e-10 68.2 100 43.0
Cre10.g432100 Chlamydomonas reinhardtii HOM05D006087 ORTHO05D007479 1.3e-08 63.2 50 52.0
MD16G1189100 Malus domestica HOM05D006087 ORTHO05D007479 2.1e-06 55.8 44 59.1


User provided reference genes

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