Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1629.1 Capsicum annuum HOM05D003741 ORTHO05D004247 2.8e-76 288.5 143 100.0
Solyc02g069090.3 Solanum lycopersicum HOM05D003741 ORTHO05D004247 3.1e-35 152.1 125 64.8
Solyc02g069100.4 Solanum lycopersicum HOM05D003741 ORTHO05D004247 3.1e-35 152.1 123 61.8
Nitab4.5_0003773g0090 Nicotiana tabacum HOM05D001270 ORTHO05D001099 1.2e-34 150.2 125 63.2
Peaxi162Scf00149g00919 Petunia axillaris HOM05D003741 ORTHO05D004247 3.8e-33 145.2 151 53.0
Nitab4.5_0002056g0060 Nicotiana tabacum HOM05D003741 ORTHO05D004247 2.1e-31 139.4 123 61.0
CAN.G1222.9 Capsicum annuum HOM05D003741 ORTHO05D004247 1.3e-28 130.2 125 52.0
ClCG10G013270 Citrullus lanatus HOM05D003741 ORTHO05D004247 2.2e-28 129.4 123 52.0
CsaV3_3G043370 Cucumis sativus L. HOM05D003741 ORTHO05D004247 2.2e-28 129.4 125 53.6
CAN.G758.10 Capsicum annuum HOM05D003741 ORTHO05D004247 2.9e-28 129.0 131 50.4
Sopen02g018230 Solanum pennellii HOM05D003741 ORTHO05D004247 7.0e-27 124.4 135 48.9
TWI23G0544 Tripterygium wilfordii HOM05D003741 ORTHO05D004247 1.2e-26 123.6 125 50.4
Potri.002G184201 Populus trichocarpa HOM05D003741 ORTHO05D004247 1.6e-26 123.2 125 49.6
Sed0014336 Sechium edule HOM05D003741 ORTHO05D004247 1.6e-26 123.2 125 51.2
Ciclev10020859m.g Citrus clementina HOM05D003741 ORTHO05D004247 2.0e-26 122.9 125 52.0
Hma1.2p1_0098F.1_g048300 Hydrangea macrophylla HOM05D003741 ORTHO05D004247 2.0e-26 122.9 125 52.0
Lju2566A1T38 Lonicera japonica HOM05D003741 ORTHO05D004247 2.0e-26 122.9 127 51.2
Nn4g25264 Nelumbo nucifera HOM05D003741 ORTHO05D004247 2.0e-26 122.9 125 48.8
Sed0003001 Sechium edule HOM05D003741 ORTHO05D004247 2.0e-26 122.9 125 50.4
CSS0030537 Camellia sinensis var. sinensis HOM05D003741 ORTHO05D004247 2.7e-26 122.5 125 50.4
Gorai.007G055400 Gossypium raimondii HOM05D003741 ORTHO05D004247 3.5e-26 122.1 125 51.2
Oeu060888.1 Olea europaea HOM05D003741 ORTHO05D004247 3.5e-26 122.1 125 48.8
Oeu060889.1 Olea europaea HOM05D003741 ORTHO05D004247 3.5e-26 122.1 125 48.8
Potri.002G184300 Populus trichocarpa HOM05D003741 ORTHO05D004247 3.5e-26 122.1 125 49.6
Gohir.D11G050925 Gossypium hirsutum HOM05D003741 ORTHO05D004247 4.6e-26 121.7 125 51.2
Gohir.D11G051000 Gossypium hirsutum HOM05D003741 ORTHO05D004247 4.6e-26 121.7 125 51.2
TAR636G2991 Trochodendron aralioides HOM05D003741 ORTHO05D004247 4.6e-26 121.7 125 48.8
MSTRG.21732 Avicennia marina HOM05D003741 ORTHO05D004247 6.0e-26 121.3 131 49.6
CAN.G1222.10 Capsicum annuum HOM05D003741 ORTHO05D004247 7.8e-26 120.9 137 47.4
Migut.D00004 Erythranthe guttata HOM05D003741 ORTHO05D004247 1.0e-25 120.6 129 48.8
Psat3g015680 Pisum sativum HOM05D003741 ORTHO05D004247 1.3e-25 120.2 131 48.9
Thecc.01G328700 Theobroma cacao HOM05D003741 ORTHO05D004247 1.3e-25 120.2 127 50.4
Solyc02g069110.4 Solanum lycopersicum HOM05D003741 ORTHO05D004247 1.7e-25 119.8 125 51.2
Dinv03516 Davidia involucrata HOM05D003741 ORTHO05D004247 2.3e-25 119.4 125 48.8
Peaxi162Scf00149g01016 Petunia axillaris HOM05D003741 ORTHO05D004247 2.3e-25 119.4 137 46.0
Duzib138G0796 Durio zibethinus HOM05D003741 ORTHO05D004247 3.0e-25 119.0 125 49.6
Prupe.3G000200 Prunus persica HOM05D003741 ORTHO05D004247 3.0e-25 119.0 125 50.4
Potri.014G109801 Populus trichocarpa HOM05D003741 ORTHO05D004247 5.0e-25 118.2 125 48.8
PSO210G2167 Papaver somniferum HOM05D003741 ORTHO05D004247 8.6e-25 117.5 127 48.8
PSO761G0307 Papaver somniferum HOM05D003741 ORTHO05D004247 8.6e-25 117.5 127 48.8
DCAR_030726 Daucus carota HOM05D003741 ORTHO05D004247 1.1e-24 117.1 125 48.8
COL.COLO4_23087 Corchorus olitorius HOM05D003741 ORTHO05D004247 1.5e-24 116.7 125 47.2
THA.LOC104815908 Tarenaya hassleriana HOM05D003741 ORTHO05D004247 1.9e-24 116.3 129 46.5
arahy.Tifrunner.gnm1.ann1.00ZDTM Arachis hypogaea HOM05D003741 ORTHO05D004247 2.5e-24 115.9 123 49.6
Thhalv10028753m.g Eutrema salsugineum HOM05D003741 ORTHO05D004247 2.5e-24 115.9 129 46.5
Manes.05G006300 Manihot esculenta HOM05D003741 ORTHO05D004247 2.5e-24 115.9 125 47.2
arahy.Tifrunner.gnm1.ann1.8L6AK6 Arachis hypogaea HOM05D003741 ORTHO05D004247 4.3e-24 115.2 123 48.8
CiPaw.07G128200 Carya illinoinensis HOM05D003741 ORTHO05D004247 4.3e-24 115.2 127 47.2
Nitab4.5_0002463g0040 Nicotiana tabacum HOM05D003741 ORTHO05D004247 4.3e-24 115.2 123 48.0
vmacro02353 Vaccinium macrocarpon HOM05D003741 ORTHO05D004247 4.3e-24 115.2 142 45.8
Cpa.g.sc57.55 Carica papaya HOM05D003741 ORTHO05D004247 5.6e-24 114.8 129 47.3
Duzib133G0965 Durio zibethinus HOM05D003741 ORTHO05D004247 5.6e-24 114.8 125 48.0
QL01p026787 Quercus lobata HOM05D003741 ORTHO05D004247 5.6e-24 114.8 143 43.4
Sc05g0003530 Simmondsia chinensis HOM05D003741 ORTHO05D004247 5.6e-24 114.8 125 50.4
BcaB01g06137 Brassica carinata HOM05D003741 ORTHO05D004247 7.3e-24 114.4 127 44.9
Sp6g01520 Schrenkiella parvula HOM05D003741 ORTHO05D004247 7.3e-24 114.4 129 46.5
Sabra02G0131500 Salix brachista HOM05D003741 ORTHO05D004247 9.5e-24 114.0 142 46.5
C07p13080 Brassica napus HOM05D003741 ORTHO05D004247 1.2e-23 113.6 127 43.3
Sabra02G0131600 Salix brachista HOM05D003741 ORTHO05D004247 1.2e-23 113.6 128 46.1
Sp1g01380 Schrenkiella parvula HOM05D003741 ORTHO05D004247 1.2e-23 113.6 129 45.0
Gohir.A11G103300 Gossypium hirsutum HOM05D003741 ORTHO05D004247 1.6e-23 113.2 125 48.0
Phvul.001G220100 Phaseolus vulgaris HOM05D003741 ORTHO05D004247 2.1e-23 112.8 127 48.8
AT4G01610 Arabidopsis thaliana HOM05D003741 ORTHO05D004247 2.8e-23 112.5 129 45.7
BcaB01g02127 Brassica carinata HOM05D003741 ORTHO05D004247 2.8e-23 112.5 129 45.0
BcaC04g24082 Brassica carinata HOM05D003741 ORTHO05D004247 3.6e-23 112.1 129 45.0
BcaC06g35601 Brassica carinata HOM05D003741 ORTHO05D004247 3.6e-23 112.1 129 45.7
A09p01170 Brassica napus HOM05D003741 ORTHO05D004247 3.6e-23 112.1 129 45.0
C09p01250 Brassica napus HOM05D003741 ORTHO05D004247 3.6e-23 112.1 129 45.0
BraA09t35787Z Brassica rapa HOM05D003741 ORTHO05D004247 3.6e-23 112.1 129 45.0
Thhalv10008009m.g Eutrema salsugineum HOM05D003741 ORTHO05D004247 3.6e-23 112.1 129 45.7
Glyma.19G223300 Glycine max HOM05D003741 ORTHO05D004247 3.6e-23 112.1 127 48.8
Manes.01G236900 Manihot esculenta HOM05D003741 ORTHO05D004247 3.6e-23 112.1 125 47.2
AL6G51730 Arabidopsis lyrata HOM05D003741 ORTHO05D004247 4.7e-23 111.7 129 45.0
Cfa004932 Carpinus fangiana HOM05D003741 ORTHO05D004247 4.7e-23 111.7 125 46.4
Haze_05174 Corylus avellana HOM05D003741 ORTHO05D004247 4.7e-23 111.7 123 44.7
Gohir.D11G107766 Gossypium hirsutum HOM05D003741 ORTHO05D004247 4.7e-23 111.7 125 47.2
Gorai.007G115600 Gossypium raimondii HOM05D003741 ORTHO05D004247 4.7e-23 111.7 125 47.2
Lj1g0024084 Lotus japonicus HOM05D003741 ORTHO05D004247 4.7e-23 111.7 127 47.2
TPR.G8367 Trifolium pratense HOM05D003741 ORTHO05D004247 4.7e-23 111.7 127 47.2
CARHR250060 Cardamine hirsuta HOM05D003741 ORTHO05D004247 6.2e-23 111.3 129 45.0
Eucgr.A00982 Eucalyptus grandis HOM05D003741 ORTHO05D004247 6.2e-23 111.3 125 47.2
THA.LOC104825920 Tarenaya hassleriana HOM05D003741 ORTHO05D004247 6.2e-23 111.3 129 45.0
CDE05G0438 Ceratophyllum demersum HOM05D003741 ORTHO05D004247 8.0e-23 110.9 125 45.6
Aa31LG5G1330 Aethionema arabicum HOM05D003741 ORTHO05D004247 1.1e-22 110.5 129 44.2
BcaB03g13517 Brassica carinata HOM05D003741 ORTHO05D004247 1.1e-22 110.5 129 45.0
Glyma.03G226300 Glycine max HOM05D003741 ORTHO05D004247 1.1e-22 110.5 127 48.0
Actinidia06418 Actinidia chinensis HOM05D003741 ORTHO05D004247 1.4e-22 110.2 140 46.4
AL1G11640 Arabidopsis lyrata HOM05D003741 ORTHO05D004247 1.4e-22 110.2 129 45.7
AT1G02305 Arabidopsis thaliana HOM05D003741 ORTHO05D004247 1.4e-22 110.2 129 45.7
BcaC02g12465 Brassica carinata HOM05D003741 ORTHO05D004247 2.3e-22 109.4 129 45.0
C04p03330 Brassica napus HOM05D003741 ORTHO05D004247 2.3e-22 109.4 137 44.5
Carub.0006s3558 Capsella rubella HOM05D003741 ORTHO05D004247 2.3e-22 109.4 129 44.2
A08p37710 Brassica napus HOM05D003741 ORTHO05D004247 3.1e-22 109.0 136 43.4
BolC9t53059H Brassica oleracea HOM05D003741 ORTHO05D004247 3.1e-22 109.0 144 39.6
BraA08t35667Z Brassica rapa HOM05D003741 ORTHO05D004247 3.1e-22 109.0 136 43.4
MD17G1285700 Malus domestica HOM05D003741 ORTHO05D004247 4.0e-22 108.6 126 46.8
VMungo1383G0455 Vigna mungo HOM05D003741 ORTHO05D004247 4.0e-22 108.6 127 47.2
RcHm_v2.0_Chr3g0485051 Rosa chinensis HOM05D003741 ORTHO05D004247 5.2e-22 108.2 125 45.6
GSVIVG01028272001 Vitis vinifera HOM05D003741 ORTHO05D004247 5.2e-22 108.2 157 39.5
DCAR_002344 Daucus carota HOM05D003741 ORTHO05D004247 6.8e-22 107.8 134 44.8
Carub.0001s0134 Capsella rubella HOM05D003741 ORTHO05D004247 1.2e-21 107.1 148 40.5
Lalb_Chr18g0046281 Lupinus albus HOM05D003741 ORTHO05D004247 1.2e-21 107.1 127 45.7
PSO210G0649 Papaver somniferum HOM05D003741 ORTHO05D004247 1.2e-21 107.1 128 46.9
PGR042G0131 Punica granatum HOM05D003741 ORTHO05D004247 1.2e-21 107.1 125 45.6
Hund18513 Selenicereus undatus HOM05D003741 ORTHO05D004247 1.2e-21 107.1 136 40.4
Medtr7g111060 Medicago truncatula HOM05D003741 ORTHO05D004247 1.5e-21 106.7 125 46.4
SGA_v2.0_scaffold80G25671 Striga asiatica HOM05D003741 ORTHO05D004247 2.0e-21 106.3 144 41.7
FvH4_1g25910 Fragaria vesca HOM05D003741 ORTHO05D004247 2.6e-21 105.9 125 44.0
Lalb_Chr04g0260241 Lupinus albus HOM05D003741 ORTHO05D004247 4.4e-21 105.1 127 45.7
Atru.chr5.823 Acer truncatum HOM05D003741 ORTHO05D004247 7.5e-21 104.4 134 41.8
CANSAT11G2508 Cannabis sativa HOM05D003741 ORTHO05D004247 7.5e-21 104.4 125 42.4
CAN.G1222.15 Capsicum annuum HOM05D003741 ORTHO05D004247 9.8e-21 104.0 140 44.3
Psat3g015720 Pisum sativum HOM05D003741 ORTHO05D004247 9.8e-21 104.0 125 48.0
ATR0796G236 Amborella trichopoda HOM05D003741 ORTHO05D004247 1.3e-20 103.6 125 42.4
Zm00001eb322580 Zea mays HOM05D003741 ORTHO05D004247 1.7e-20 103.2 127 40.9
FAN28G0860 Fragaria x ananassa HOM05D003741 ORTHO05D004247 2.2e-20 102.8 133 40.6
Medtr7g111050 Medicago truncatula HOM05D003741 ORTHO05D004247 2.9e-20 102.4 125 46.4
HPP92_017316 Vanilla planifolia HOM05D003741 ORTHO05D004247 2.9e-20 102.4 127 43.3
Ah.15g095460 Amaranthus hybridus HOM05D003741 ORTHO05D004247 6.4e-20 101.3 127 43.3
AL1G11630 Arabidopsis lyrata HOM05D003741 ORTHO05D004247 1.1e-19 100.5 129 45.0
CAN.G1222.12 Capsicum annuum HOM05D003741 ORTHO05D004247 3.2e-19 99.0 139 43.2
Ah.08g218400 Amaranthus hybridus HOM05D003741 ORTHO05D004247 4.1e-19 98.6 125 41.6
AT1G02300 Arabidopsis thaliana HOM05D003741 ORTHO05D004247 4.1e-19 98.6 145 40.0
AUR62022081 Chenopodium quinoa HOM05D003741 ORTHO05D004247 1.6e-18 96.7 123 39.0
AUR62001249 Chenopodium quinoa HOM05D003741 ORTHO05D004247 6.0e-18 94.7 128 39.1
Hund05614 Selenicereus undatus HOM05D003741 ORTHO05D004247 2.3e-17 92.8 123 38.2
CAN.G1222.16 Capsicum annuum HOM05D003741 ORTHO05D004247 5.0e-17 91.7 42 90.5
C08p00070 Brassica napus HOM05D003741 ORTHO05D004247 1.1e-16 90.5 115 41.7
BolC8t46806H Brassica oleracea HOM05D003741 ORTHO05D004247 1.1e-16 90.5 115 41.7
Sopen02g018190 Solanum pennellii HOM05D003741 ORTHO05D004247 1.9e-16 89.7 42 85.7
AagrBONN_evm.TU.Sc2ySwM_117.76 Anthoceros agrestis HOM05D003741 ORTHO05D004247 9.5e-16 87.4 147 38.1
C03p00130 Brassica napus HOM05D003741 ORTHO05D004247 4.7e-15 85.1 129 39.5
BolC7t41802H Brassica oleracea HOM05D003741 ORTHO05D004247 4.7e-15 85.1 128 39.8
Pp3c14_8830 Physcomitrium patens HOM05D003741 ORTHO05D004247 4.7e-15 85.1 127 39.4
SMO351G0395 Selaginella moellendorffii HOM05D003741 ORTHO05D004247 8.1e-15 84.3 128 39.1
Pp3c10_7510 Physcomitrium patens HOM05D003741 ORTHO05D004247 1.8e-14 83.2 131 38.2
Gohir.A11G047400 Gossypium hirsutum HOM05D003741 ORTHO05D004247 4.0e-14 82.0 42 73.8
Atru.chr5.822 Acer truncatum HOM05D003741 ORTHO05D004247 8.9e-14 80.9 43 72.1
MELO3C026898.2 Cucumis melo HOM05D003741 ORTHO05D004247 8.9e-14 80.9 42 71.4
Aqoxy2G02612 Aquilegia oxysepala HOM05D003741 ORTHO05D004247 2.6e-13 79.3 42 69.0
Mapoly0032s0066 Marchantia polymorpha HOM05D003741 ORTHO05D004247 2.6e-13 79.3 134 37.3
Cc02_g27670 Coffea canephora HOM05D003741 ORTHO05D004247 9.9e-13 77.4 42 71.4
MBI18_g38881_MAGBIO Magnolia biondii HOM05D003741 ORTHO05D004247 9.9e-13 77.4 42 66.7
EL10Ac7g18033 Beta vulgaris HOM05D003741 ORTHO05D004247 1.7e-12 76.6 131 35.1
Haze_05172 Corylus avellana HOM05D003741 ORTHO05D004247 1.7e-12 76.6 42 66.7
Pp3c2_6240 Physcomitrium patens HOM05D003741 ORTHO05D004247 2.2e-12 76.3 131 35.9
CAN.G1222.7 Capsicum annuum HOM05D003741 ORTHO05D004247 3.7e-12 75.5 123 39.8
FAN26G2502 Fragaria x ananassa HOM05D002459 ORTHO05D003006 8.3e-12 74.3 123 35.8
unitig_578.g16650 Utricularia gibba HOM05D003741 ORTHO05D004247 1.4e-11 73.6 43 74.4
BolC3t12579H Brassica oleracea HOM05D003741 ORTHO05D004247 1.9e-11 73.2 42 64.3
unitig_85.g27192 Utricularia gibba HOM05D000218 ORTHO05D004247 2.4e-11 72.8 43 72.1
CARHR001610 Cardamine hirsuta HOM05D003741 ORTHO05D004247 3.2e-11 72.4 42 64.3
Aa31LG1G10210 Aethionema arabicum HOM05D003741 ORTHO05D004247 4.1e-11 72.0 127 35.4
BolC4t21970H Brassica oleracea HOM05D003741 ORTHO05D004247 7.1e-11 71.2 42 61.9
Ca_09258_v3 Cicer arietinum L. HOM05D003741 ORTHO05D004247 7.1e-11 71.2 125 38.4
PGSC0003DMG400010362 Solanum tuberosum HOM05D003741 ORTHO05D004247 7.1e-11 71.2 42 59.5
arahy.Tifrunner.gnm1.ann1.Q44M57 Arachis hypogaea HOM05D006052 ORTHO05D007319 9.2e-11 70.9 53 56.6
CBR_g2790 Chara braunii HOM05D003741 ORTHO05D004247 1.6e-10 70.1 93 39.8
QL01p026795 Quercus lobata HOM05D003741 ORTHO05D004247 1.6e-10 70.1 103 39.8
Cc02_g27650 Coffea canephora HOM05D003741 ORTHO05D004247 1.3e-09 67.0 42 61.9
Rhsim01G0001600 Rhododendron simsii HOM05D003741 ORTHO05D004247 1.7e-09 66.6 44 63.6
CARHR001830 Cardamine hirsuta HOM05D003741 ORTHO05D004247 6.6e-09 64.7 42 61.9
TAR636G3591 Trochodendron aralioides HOM05D003741 ORTHO05D004247 2.5e-08 62.8 49 51.0
Cc02_g27660 Coffea canephora HOM05D003741 ORTHO05D004247 4.3e-08 62.0 43 62.8
CAN.G1222.11 Capsicum annuum HOM05D003741 ORTHO05D004247 5.6e-08 61.6 42 54.8
BraA07t28072Z Brassica rapa HOM05D003741 ORTHO05D004247 1.2e-07 60.5 46 56.5
BolC3t12578H Brassica oleracea HOM05D003741 ORTHO05D004247 3.6e-07 58.9 57 47.4
Ca_09259_v3 Cicer arietinum L. HOM05D003741 ORTHO05D004247 3.6e-07 58.9 127 33.9
Aqoxy2G02613 Aquilegia oxysepala HOM05D003741 ORTHO05D004247 4.7e-07 58.5 46 52.2
CSS0035522 Camellia sinensis var. sinensis HOM05D006458 ORTHO05D008433 4.7e-07 58.5 43 58.1
A07p02730 Brassica napus HOM05D003741 ORTHO05D004247 6.2e-07 58.2 59 45.8
CARHR001600 Cardamine hirsuta HOM05D003741 ORTHO05D004247 8.1e-07 57.8 46 56.5
FAN19G1627 Fragaria x ananassa HOM05D003741 ORTHO05D004247 1.1e-06 57.4 42 57.1
CAN.G1153.3 Capsicum annuum HOM05D003741 ORTHO05D004247 1.4e-06 57.0 41 63.4
CARHR001840 Cardamine hirsuta HOM05D003741 ORTHO05D004247 1.4e-06 57.0 46 56.5
Haze_05173 Corylus avellana HOM05D003741 ORTHO05D004247 1.8e-06 56.6 43 58.1
arahy.Tifrunner.gnm1.ann1.7SL7L9 Arachis hypogaea HOM05D001812 ORTHO05D004247 3.1e-06 55.8 56 46.4
Atru.chr5.821 Acer truncatum HOM05D003741 ORTHO05D004247 8.9e-06 54.3 42 57.1


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