Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1627.6 Capsicum annuum HOM05D004628 ORTHO05D005166 7.0e-63 243.8 126 100.0
PGSC0003DMG400001291 Solanum tuberosum HOM05D004628 ORTHO05D005166 3.5e-30 135.2 85 85.9
Sopen01g049070 Solanum pennellii HOM05D004628 ORTHO05D005166 1.0e-29 133.7 85 84.7
Nitab4.5_0010657g0040 Nicotiana tabacum HOM05D004628 ORTHO05D005166 2.3e-29 132.5 85 81.2
Solyc01g106750.2 Solanum lycopersicum HOM05D004628 ORTHO05D005166 2.3e-29 132.5 85 83.5
Nitab4.5_0000772g0030 Nicotiana tabacum HOM05D004628 ORTHO05D005166 6.6e-29 131.0 85 82.4
CAN.G1627.4 Capsicum annuum HOM05D004628 ORTHO05D005166 2.7e-22 109.0 56 91.1
Nitab4.5_0008331g0010 Nicotiana tabacum HOM05D004628 ORTHO05D005166 3.5e-22 108.6 80 76.2
CAN.G1164.3 Capsicum annuum HOM05D009846 ORTHO05D002235 4.6e-22 108.2 77 75.3
Peaxi162Scf00016g03244 Petunia axillaris HOM05D004628 ORTHO05D005166 1.7e-21 106.3 89 70.8
Thecc.02G121000 Theobroma cacao HOM05D004628 ORTHO05D005166 2.0e-17 92.8 93 57.0
Nitab4.5_0000575g0060 Nicotiana tabacum HOM05D004628 ORTHO05D005166 2.6e-17 92.4 81 69.1
Hma1.2p1_1051F.1_g252220 Hydrangea macrophylla HOM05D004628 ORTHO05D005166 9.9e-17 90.5 86 62.8
DCAR_021936 Daucus carota HOM05D004628 ORTHO05D005166 3.2e-15 85.5 94 58.5
Rhsim05G0093300 Rhododendron simsii HOM05D004628 ORTHO05D005166 3.2e-15 85.5 87 58.6
RcHm_v2.0_Chr6g0247921 Rosa chinensis HOM05D004628 ORTHO05D005166 4.2e-15 85.1 95 52.6
Duzib132G0942 Durio zibethinus HOM05D004628 ORTHO05D005166 2.1e-14 82.8 87 59.8
Cc02_g20190 Coffea canephora HOM05D004628 ORTHO05D005166 4.6e-14 81.6 113 47.8
Dinv09529 Davidia involucrata HOM05D004628 ORTHO05D005166 7.9e-14 80.9 87 59.8
FAN24G0611 Fragaria x ananassa HOM05D004628 ORTHO05D005166 1.3e-13 80.1 91 54.9
FAN27G1701 Fragaria x ananassa HOM05D004628 ORTHO05D005166 1.3e-13 80.1 92 56.5
Potri.009G084400 Populus trichocarpa HOM05D004628 ORTHO05D005166 1.3e-13 80.1 90 57.8
FvH4_2g03070 Fragaria vesca HOM05D004628 ORTHO05D005166 1.7e-13 79.7 91 54.9
Ciclev10027822m.g Citrus clementina HOM05D004628 ORTHO05D005166 2.3e-13 79.3 85 56.5
COL.COLO4_32472 Corchorus olitorius HOM05D004628 ORTHO05D005166 3.0e-13 79.0 74 59.5
Dinv16065 Davidia involucrata HOM05D004628 ORTHO05D005166 1.1e-12 77.0 88 59.1
Duzib132G1149 Durio zibethinus HOM05D004628 ORTHO05D005166 1.1e-12 77.0 87 57.5
FAN20G2820 Fragaria x ananassa HOM05D004628 ORTHO05D005166 1.9e-12 76.3 92 54.3
CSS0024832 Camellia sinensis var. sinensis HOM05D004628 ORTHO05D005166 2.5e-12 75.9 85 56.5
Actinidia28002 Actinidia chinensis HOM05D004628 ORTHO05D006160 7.4e-12 74.3 87 52.9
Prupe.8G151700 Prunus persica HOM05D004628 ORTHO05D005166 7.4e-12 74.3 85 55.3
SGA_v2.0_scaffold519G52683 Striga asiatica HOM05D004628 ORTHO05D005166 9.6e-12 73.9 94 51.1
Cfa004712 Carpinus fangiana HOM05D004628 ORTHO05D005166 1.6e-11 73.2 110 50.0
Ca_21082_v3 Cicer arietinum L. HOM05D004628 ORTHO05D005166 1.6e-11 73.2 83 51.8
QL11p028919 Quercus lobata HOM05D004628 ORTHO05D005166 1.6e-11 73.2 87 57.5
QL93p0138_0014 Quercus lobata HOM05D004628 ORTHO05D005166 1.6e-11 73.2 87 57.5
GSVIVG01037038001 Vitis vinifera HOM05D004628 ORTHO05D005166 1.6e-11 73.2 94 53.2
vmacro22260 Vaccinium macrocarpon HOM05D004628 ORTHO05D005166 2.8e-11 72.4 76 57.9
Lj5A222T77 Lonicera japonica HOM05D004628 ORTHO05D005166 3.6e-11 72.0 102 51.0
Lj4g0013789 Lotus japonicus HOM05D004628 ORTHO05D005166 3.6e-11 72.0 86 55.8
Gohir.D02G203066 Gossypium hirsutum HOM05D004628 ORTHO05D005166 4.8e-11 71.6 86 50.0
Gorai.005G229300 Gossypium raimondii HOM05D004628 ORTHO05D005166 4.8e-11 71.6 86 50.0
Aqoxy6G01519 Aquilegia oxysepala HOM05D004628 ORTHO05D005166 6.2e-11 71.2 80 57.5
TAR381G0961 Trochodendron aralioides HOM05D004628 ORTHO05D005166 6.2e-11 71.2 66 57.6
Sabra09G0065100 Salix brachista HOM05D004628 ORTHO05D005166 8.1e-11 70.9 86 53.5
CiPaw.06G163200 Carya illinoinensis HOM05D004628 ORTHO05D005166 1.1e-10 70.5 88 56.8
TWI14G1143 Tripterygium wilfordii HOM05D004628 ORTHO05D005166 1.1e-10 70.5 83 51.8
Gohir.A03G180400 Gossypium hirsutum HOM05D004628 ORTHO05D005166 1.8e-10 69.7 86 48.8
TPR.G37037 Trifolium pratense HOM05D004628 ORTHO05D005166 2.4e-10 69.3 76 51.3
Atru.chr5.2254 Acer truncatum HOM05D004628 ORTHO05D005166 3.1e-10 68.9 73 58.9
Atru.chr1.1899 Acer truncatum HOM05D004628 ORTHO05D005166 5.3e-10 68.2 73 57.5
AUR62027031 Chenopodium quinoa HOM05D004628 ORTHO05D005166 5.3e-10 68.2 87 52.9
Medtr4g132160 Medicago truncatula HOM05D004628 ORTHO05D005166 5.3e-10 68.2 83 51.8
MSTRG.16666 Avicennia marina HOM05D004628 ORTHO05D005166 6.9e-10 67.8 66 62.1
FAN15G3289 Fragaria x ananassa HOM05D004628 ORTHO05D005166 9.0e-10 67.4 84 48.8
Potri.001G289100 Populus trichocarpa HOM05D004628 ORTHO05D005166 9.0e-10 67.4 90 53.3
Oeu037295.1 Olea europaea HOM05D004628 ORTHO05D005166 2.0e-09 66.2 74 56.8
ClCG10G009980 Citrullus lanatus HOM05D004628 ORTHO05D005166 2.6e-09 65.9 65 53.8
AUR62030875 Chenopodium quinoa HOM05D004628 ORTHO05D005166 3.4e-09 65.5 87 51.7
Glyma.07G260600 Glycine max HOM05D004628 ORTHO05D005166 9.9e-09 63.9 80 50.0
arahy.Tifrunner.gnm1.ann1.L5X8FN Arachis hypogaea HOM05D004628 ORTHO05D005166 1.3e-08 63.5 84 48.8
Hund00415 Selenicereus undatus HOM05D004628 ORTHO05D005166 1.3e-08 63.5 99 51.5
TAR628G0237 Trochodendron aralioides HOM05D004628 ORTHO05D005166 1.3e-08 63.5 79 51.9
Gohir.A13G048100 Gossypium hirsutum HOM05D004628 ORTHO05D005166 2.2e-08 62.8 68 50.0
Nn6g32057 Nelumbo nucifera HOM05D004628 ORTHO05D005166 2.2e-08 62.8 79 50.6
arahy.Tifrunner.gnm1.ann1.R9786Y Arachis hypogaea HOM05D004628 ORTHO05D005166 3.8e-08 62.0 84 47.6
Lalb_Chr18g0056371 Lupinus albus HOM05D004628 ORTHO05D005166 3.8e-08 62.0 83 53.0
PGR142G3374 Punica granatum HOM05D004628 ORTHO05D005166 4.9e-08 61.6 92 50.0
Haze_10333 Corylus avellana HOM05D004628 ORTHO05D005166 6.4e-08 61.2 45 68.9
Eucgr.B01419 Eucalyptus grandis HOM05D004628 ORTHO05D005166 6.4e-08 61.2 112 43.8
Manes.10G088200 Manihot esculenta HOM05D004628 ORTHO05D005166 6.4e-08 61.2 55 54.5
SalBow6G1764 Salvia bowleyana HOM05D004628 ORTHO05D005166 6.4e-08 61.2 97 48.5
CARHR106490 Cardamine hirsuta HOM05D004628 ORTHO05D005166 8.4e-08 60.8 88 47.7
Migut.B00478 Erythranthe guttata HOM05D004628 ORTHO05D005166 8.4e-08 60.8 91 57.1
SalBow6G5308 Salvia bowleyana HOM05D004628 ORTHO05D005166 8.4e-08 60.8 97 48.5
SGA_v2.0_scaffold32G12978 Striga asiatica HOM05D004628 ORTHO05D005166 1.4e-07 60.1 108 38.0
Sed0020853 Sechium edule HOM05D004628 ORTHO05D005166 1.9e-07 59.7 95 43.2
THA.LOC104819526 Tarenaya hassleriana HOM05D004628 ORTHO05D005166 1.9e-07 59.7 93 49.5
Gorai.013G052200 Gossypium raimondii HOM05D004628 ORTHO05D005166 2.4e-07 59.3 78 43.6
MELO3C018028.2 Cucumis melo HOM05D004628 ORTHO05D005166 3.2e-07 58.9 104 42.3
Glyma.17G013400 Glycine max HOM05D004628 ORTHO05D005166 4.2e-07 58.5 80 47.5
CsaV3_4G000030 Cucumis sativus L. HOM05D004628 ORTHO05D005166 9.3e-07 57.4 110 40.9
ECA234G3304 Erigeron canadensis HOM05D004628 ORTHO05D005166 9.3e-07 57.4 65 53.8
Carub.0003s2996 Capsella rubella HOM05D004628 ORTHO05D005166 1.2e-06 57.0 72 50.0
unitig_60.g25465 Utricularia gibba HOM05D004628 ORTHO05D005166 1.2e-06 57.0 64 50.0
BcaC06g36138 Brassica carinata HOM05D004628 ORTHO05D005166 2.1e-06 56.2 77 46.8
A07p04590 Brassica napus HOM05D004628 ORTHO05D005166 2.1e-06 56.2 77 46.8
C07p07410 Brassica napus HOM05D004628 ORTHO05D005166 2.1e-06 56.2 77 46.8
BolC7t41157H Brassica oleracea HOM05D004628 ORTHO05D005166 2.1e-06 56.2 77 46.8
BraA07t28247Z Brassica rapa HOM05D004628 ORTHO05D005166 2.1e-06 56.2 77 46.8
Thhalv10022556m.g Eutrema salsugineum HOM05D004628 ORTHO05D005166 4.6e-06 55.1 55 58.2
Aa31LG8G13660 Aethionema arabicum HOM05D004628 ORTHO05D005166 6.0e-06 54.7 57 59.6
AL3G52350 Arabidopsis lyrata HOM05D004628 ORTHO05D005166 7.9e-06 54.3 51 60.8
Gohir.D13G046500 Gossypium hirsutum HOM05D004628 ORTHO05D005166 7.9e-06 54.3 65 44.6
Sabra16G0180900 Salix brachista HOM05D004628 ORTHO05D005166 7.9e-06 54.3 123 37.4
Sc08g0004290 Simmondsia chinensis HOM05D004628 ORTHO05D005166 7.9e-06 54.3 75 52.0


User provided reference genes

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