Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1627.1 Capsicum annuum HOM05D009846 ORTHO05D002235 1.9e-101 373.2 235 100.0
CAN.G411.100 Capsicum annuum HOM05D009846 ORTHO05D000368 6.3e-60 235.3 401 41.1
CAN.G1627.5 Capsicum annuum HOM05D009846 ORTHO05D000368 6.5e-49 198.7 530 32.3
CAN.G206.199 Capsicum annuum HOM05D003021 ORTHO05D002235 6.1e-39 165.6 84 94.0
CAN.G1164.3 Capsicum annuum HOM05D009846 ORTHO05D002235 2.2e-36 157.1 81 92.6
CAN.G289.54 Capsicum annuum HOM05D003021 ORTHO05D002235 4.8e-36 156.0 84 89.3
Sopen02g033310 Solanum pennellii HOM05D003021 ORTHO05D002235 1.5e-32 144.4 81 86.4
PGSC0003DMG400001352 Solanum tuberosum HOM05D003021 ORTHO05D002235 1.5e-32 144.4 81 86.4
CAN.G411.103 Capsicum annuum HOM05D009846 ORTHO05D000368 1.9e-32 144.1 206 46.1
CAN.G638.54 Capsicum annuum HOM05D009846 ORTHO05D000368 5.5e-32 142.5 251 38.2
Solyc02g088580.1 Solanum lycopersicum HOM05D003021 ORTHO05D002235 5.5e-32 142.5 81 85.2
Nitab4.5_0008213g0010 Nicotiana tabacum HOM05D003021 ORTHO05D002235 1.2e-31 141.4 84 81.0
CAN.G411.98 Capsicum annuum HOM05D009846 ORTHO05D002235 1.6e-26 124.4 212 38.7
Nitab4.5_0000565g0110 Nicotiana tabacum HOM05D003021 ORTHO05D002235 4.5e-26 122.9 84 72.6
CAN.G411.94 Capsicum annuum HOM05D009846 ORTHO05D000368 1.7e-17 94.4 52 88.5
CAN.G606.80 Capsicum annuum HOM05D009846 ORTHO05D000368 3.9e-17 93.2 69 69.6
Dinv11486 Davidia involucrata HOM05D003021 ORTHO05D002235 1.5e-13 81.3 79 51.9
CAN.G1236.12 Capsicum annuum HOM05D009846 ORTHO05D002235 2.6e-13 80.5 53 69.8
CAN.G41.13 Capsicum annuum HOM05D009846 ORTHO05D002235 3.4e-13 80.1 50 78.0
Oeu000855.1 Olea europaea HOM05D003021 ORTHO05D002235 5.8e-13 79.3 81 50.6
CAN.G206.200 Capsicum annuum HOM05D009846 ORTHO05D000368 9.8e-13 78.6 53 75.5
Dinv33810 Davidia involucrata HOM05D005960 ORTHO05D007537 9.8e-13 78.6 84 50.0
Oeu062145.1 Olea europaea HOM05D003021 ORTHO05D002235 9.8e-13 78.6 81 50.6
CAN.G473.66 Capsicum annuum HOM05D009846 ORTHO05D000002 1.7e-12 77.8 53 73.6
TAR622G0013 Trochodendron aralioides HOM05D003021 ORTHO05D002235 1.7e-12 77.8 76 51.3
Ciclev10011360m.g Citrus clementina HOM05D003021 ORTHO05D002235 2.2e-12 77.4 81 50.6
CAN.G337.7 Capsicum annuum HOM05D009846 ORTHO05D000368 2.9e-12 77.0 53 73.6
CAN.G337.8 Capsicum annuum HOM05D009846 ORTHO05D000368 2.9e-12 77.0 53 73.6
Nn3g17378 Nelumbo nucifera HOM05D003021 ORTHO05D002235 3.7e-12 76.6 76 50.0
TAR629G0828 Trochodendron aralioides HOM05D003021 ORTHO05D002235 4.9e-12 76.3 85 47.1
TAR371G0449 Trochodendron aralioides HOM05D003021 ORTHO05D002235 3.2e-11 73.6 80 50.0
MBI16_g15533_MAGBIO Magnolia biondii HOM05D003021 ORTHO05D002235 1.2e-10 71.6 92 45.7
CiPaw.04G058300 Carya illinoinensis HOM05D003021 ORTHO05D002235 1.6e-10 71.2 74 48.6
TWI60G1604 Tripterygium wilfordii HOM05D003021 ORTHO05D002235 1.6e-10 71.2 83 45.8
Nitab4.5_0000212g0140 Nicotiana tabacum HOM05D003021 ORTHO05D002235 2.7e-10 70.5 57 61.4
Nitab4.5_0003145g0060 Nicotiana tabacum HOM05D003021 ORTHO05D002235 2.7e-10 70.5 57 61.4
CiPaw.03G091400 Carya illinoinensis HOM05D003021 ORTHO05D002235 7.8e-10 68.9 81 46.9
QL02p039488 Quercus lobata HOM05D003021 ORTHO05D002235 1.7e-09 67.8 76 48.7
Manes.01G099000 Manihot esculenta HOM05D003021 ORTHO05D002235 3.9e-09 66.6 87 46.0
Cfa007625 Carpinus fangiana HOM05D003021 ORTHO05D002235 5.1e-09 66.2 54 57.4
Actinidia01976 Actinidia chinensis HOM05D003021 ORTHO05D002235 8.6e-09 65.5 75 45.3
Cc07_g03910 Coffea canephora HOM05D003021 ORTHO05D002235 8.6e-09 65.5 81 44.4
Rhsim09G0002000 Rhododendron simsii HOM05D001654 ORTHO05D002235 1.1e-08 65.1 81 45.7
THA.LOC104805496 Tarenaya hassleriana HOM05D003021 ORTHO05D002235 1.5e-08 64.7 55 58.2
Potri.017G090200 Populus trichocarpa HOM05D003021 ORTHO05D002235 1.9e-08 64.3 79 46.8
Thhalv10013405m.g Eutrema salsugineum HOM05D009950 ORTHO05D002235 3.3e-08 63.5 65 53.8
THA.LOC104823896 Tarenaya hassleriana HOM05D003021 ORTHO05D002235 3.3e-08 63.5 78 46.2
CANSAT80G0381 Cannabis sativa HOM05D003021 ORTHO05D002235 5.6e-08 62.8 91 38.5
MELO3C002008.2 Cucumis melo HOM05D003021 ORTHO05D002235 7.3e-08 62.4 65 46.2
SGA_v2.0_scaffold52G19187 Striga asiatica HOM05D003021 ORTHO05D002235 9.5e-08 62.0 82 46.3
AL6G26280 Arabidopsis lyrata HOM05D009950 ORTHO05D002235 1.2e-07 61.6 52 59.6
MSTRG.23902 Avicennia marina HOM05D003021 ORTHO05D002235 1.2e-07 61.6 78 44.9
Nn4g23344 Nelumbo nucifera HOM05D003021 ORTHO05D002235 1.2e-07 61.6 58 48.3
Thecc.04G090900 Theobroma cacao HOM05D003021 ORTHO05D002235 1.6e-07 61.2 72 47.2
GSVIVG01011491001 Vitis vinifera HOM05D003021 ORTHO05D002235 1.6e-07 61.2 81 45.7
Aa31LG9G16610 Aethionema arabicum HOM05D003021 ORTHO05D002235 2.1e-07 60.8 56 53.6
Sabra17G0079400 Salix brachista HOM05D003021 ORTHO05D002235 2.1e-07 60.8 79 43.0
ATR0111G037 Amborella trichopoda HOM05D003021 ORTHO05D002235 3.6e-07 60.1 59 52.5
CsaV3_1G005770 Cucumis sativus L. HOM05D003021 ORTHO05D002235 3.6e-07 60.1 65 46.2
Gohir.D04G045100 Gossypium hirsutum HOM05D003021 ORTHO05D002235 3.6e-07 60.1 76 44.7
Duzib187G0754 Durio zibethinus HOM05D003021 ORTHO05D002235 4.7e-07 59.7 70 47.1
CSS0009627 Camellia sinensis var. sinensis HOM05D003021 ORTHO05D002235 6.2e-07 59.3 114 35.1
Gorai.012G050300 Gossypium raimondii HOM05D003021 ORTHO05D002235 6.2e-07 59.3 76 44.7
Gohir.A05G370400 Gossypium hirsutum HOM05D003021 ORTHO05D002235 8.1e-07 58.9 76 43.4
Cpa.g.sc14.145 Carica papaya HOM05D003021 ORTHO05D002235 1.1e-06 58.5 57 54.4
Duzib147G0806 Durio zibethinus HOM05D003021 ORTHO05D002235 1.1e-06 58.5 51 51.0
Thhalv10027728m.g Eutrema salsugineum HOM05D003021 ORTHO05D002235 1.1e-06 58.5 82 40.2
Prupe.3G258800 Prunus persica HOM05D003021 ORTHO05D002235 1.4e-06 58.2 84 40.5
Sp6g28670 Schrenkiella parvula HOM05D009950 ORTHO05D002235 1.4e-06 58.2 52 57.7
MD09G1061400 Malus domestica HOM05D003021 ORTHO05D002235 1.8e-06 57.8 83 44.6
COL.COLO4_21376 Corchorus olitorius HOM05D003021 ORTHO05D002235 2.3e-06 57.4 76 44.7
Eucgr.B00563 Eucalyptus grandis HOM05D003021 ORTHO05D002235 2.3e-06 57.4 60 45.0
AL7G50940 Arabidopsis lyrata HOM05D003021 ORTHO05D002235 4.0e-06 56.6 80 37.5
Dinv10680 Davidia involucrata HOM05D003021 ORTHO05D002235 4.0e-06 56.6 49 55.1
SalBow1G6367 Salvia bowleyana HOM05D003021 ORTHO05D002235 4.0e-06 56.6 70 44.3
Migut.H00652 Erythranthe guttata HOM05D003021 ORTHO05D002235 5.2e-06 56.2 81 43.2
Sed0005734 Sechium edule HOM05D003021 ORTHO05D002235 5.2e-06 56.2 71 40.8
Aa31LG2G3990 Aethionema arabicum HOM05D003021 ORTHO05D002235 6.8e-06 55.8 58 44.8
Actinidia09241 Actinidia chinensis HOM05D003021 ORTHO05D002235 8.9e-06 55.5 70 44.3
Glyma.08G241800 Glycine max HOM05D003021 ORTHO05D002235 8.9e-06 55.5 52 50.0
QL10p018571 Quercus lobata HOM05D003021 ORTHO05D002235 8.9e-06 55.5 80 40.0
THA.LOC104822343 Tarenaya hassleriana HOM05D009950 ORTHO05D002235 8.9e-06 55.5 93 35.5


User provided reference genes

Program Settings