Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G162.53 Capsicum annuum HOM05D003240 ORTHO05D009426 3.3e-62 241.9 156 100.0
PGSC0003DMG400012465 Solanum tuberosum HOM05D003240 ORTHO05D009426 1.2e-35 153.7 156 77.6
Sopen07g031280 Solanum pennellii HOM05D003240 ORTHO05D009426 1.5e-35 153.3 156 77.6
Nitab4.5_0001336g0090 Nicotiana tabacum HOM05D003240 ORTHO05D009426 1.8e-31 139.8 155 71.0
Nitab4.5_0001241g0070 Nicotiana tabacum HOM05D003240 ORTHO05D009426 3.3e-30 135.6 156 69.2
Potri.001G399200 Populus trichocarpa HOM05D003240 ORTHO05D009426 2.9e-26 122.5 119 56.3
CiPaw.12G118800 Carya illinoinensis HOM05D003240 ORTHO05D009426 1.4e-25 120.2 124 55.6
TWI38G1889 Tripterygium wilfordii HOM05D003240 ORTHO05D009426 3.2e-25 119.0 158 63.9
Eucgr.F01147 Eucalyptus grandis HOM05D003240 ORTHO05D009426 4.2e-25 118.6 119 52.1
Thecc.07G091300 Theobroma cacao HOM05D003240 ORTHO05D009426 2.7e-24 115.9 128 52.3
Haze_09435 Corylus avellana HOM05D003240 ORTHO05D009426 1.4e-23 113.6 158 65.8
Sabra16G0261800 Salix brachista HOM05D003240 ORTHO05D009426 1.4e-23 113.6 117 52.1
Ciclev10010456m.g Citrus clementina HOM05D003240 ORTHO05D009426 2.3e-23 112.8 110 53.6
DCAR_017136 Daucus carota HOM05D003240 ORTHO05D009426 2.3e-23 112.8 118 53.4
FAN16G0971 Fragaria x ananassa HOM05D003240 ORTHO05D009426 5.1e-23 111.7 115 50.4
Potri.011G118600 Populus trichocarpa HOM05D003240 ORTHO05D009426 1.5e-22 110.2 119 54.6
PGR083G0779 Punica granatum HOM05D003240 ORTHO05D009426 1.5e-22 110.2 121 47.9
Prupe.4G180300 Prunus persica HOM05D003240 ORTHO05D009426 2.6e-22 109.4 111 51.4
CARHR043350 Cardamine hirsuta HOM05D003240 ORTHO05D009426 9.7e-22 107.5 122 47.5
Manes.15G087500 Manihot esculenta HOM05D003240 ORTHO05D009426 9.7e-22 107.5 108 52.8
Aqoxy1G02389 Aquilegia oxysepala HOM05D003240 ORTHO05D009426 1.3e-21 107.1 118 51.7
FAN21G1097 Fragaria x ananassa HOM05D003240 ORTHO05D009426 1.3e-21 107.1 114 50.9
Sp1g39680 Schrenkiella parvula HOM05D003240 ORTHO05D009426 1.3e-21 107.1 126 48.4
AT1G53130 Arabidopsis thaliana HOM05D003240 ORTHO05D009426 2.2e-21 106.3 122 47.5
FAN25G3490 Fragaria x ananassa HOM05D003240 ORTHO05D009426 2.2e-21 106.3 114 50.9
Hma1.2p1_0458F.1_g157060 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 2.2e-21 106.3 120 49.2
Lj3g0010365 Lotus japonicus HOM05D003240 ORTHO05D009426 2.2e-21 106.3 120 47.5
FvH4_3g19820 Fragaria vesca HOM05D003240 ORTHO05D009426 2.8e-21 105.9 113 50.4
Carub.0001s4229 Capsella rubella HOM05D003240 ORTHO05D009426 3.7e-21 105.5 129 47.3
Thhalv10012399m.g Eutrema salsugineum HOM05D003240 ORTHO05D009426 3.7e-21 105.5 122 48.4
MD03G1228400 Malus domestica HOM05D003240 ORTHO05D009426 4.8e-21 105.1 146 65.1
Haze_09433 Corylus avellana HOM05D003240 ORTHO05D009426 6.3e-21 104.8 158 59.5
MBI06_g23076_MAGBIO Magnolia biondii HOM05D003240 ORTHO05D009426 6.3e-21 104.8 115 53.0
RcHm_v2.0_Chr5g0033251 Rosa chinensis HOM05D003240 ORTHO05D009426 6.3e-21 104.8 114 51.8
AL1G61490 Arabidopsis lyrata HOM05D003240 ORTHO05D009426 8.2e-21 104.4 129 48.1
Cpa.g.sc80.73 Carica papaya HOM05D003240 ORTHO05D009426 1.1e-20 104.0 83 60.2
Oeu019313.1 Olea europaea HOM05D003240 ORTHO05D009426 1.1e-20 104.0 119 47.1
BcaB07g33356 Brassica carinata HOM05D003240 ORTHO05D009426 1.4e-20 103.6 123 48.0
A06p01190 Brassica napus HOM05D003240 ORTHO05D009426 3.1e-20 102.4 124 48.4
BraA06t23346Z Brassica rapa HOM05D003240 ORTHO05D009426 3.1e-20 102.4 124 48.4
BcaC08g43498 Brassica carinata HOM05D003240 ORTHO05D009426 5.3e-20 101.7 124 46.0
C06p08830 Brassica napus HOM05D003240 ORTHO05D009426 5.3e-20 101.7 124 46.0
BolC6t35961H Brassica oleracea HOM05D003240 ORTHO05D017503 5.3e-20 101.7 124 46.0
Dinv14922 Davidia involucrata HOM05D003240 ORTHO05D009426 5.3e-20 101.7 118 49.2
Nn1g06519 Nelumbo nucifera HOM05D003240 ORTHO05D009426 5.3e-20 101.7 118 46.6
Atru.chr2.2486 Acer truncatum HOM05D003240 ORTHO05D009426 9.1e-20 100.9 132 47.0
CSS0038111 Camellia sinensis var. sinensis HOM05D003240 ORTHO05D009426 1.2e-19 100.5 117 50.4
Duzib213G1023 Durio zibethinus HOM05D003240 ORTHO05D009426 1.2e-19 100.5 166 59.6
Lj3g0021284 Lotus japonicus HOM05D003240 ORTHO05D009426 1.2e-19 100.5 124 47.6
CSS0044584 Camellia sinensis var. sinensis HOM05D003240 ORTHO05D009426 1.5e-19 100.1 117 50.4
Sabra11G0103500 Salix brachista HOM05D003240 ORTHO05D009426 1.5e-19 100.1 120 50.0
VMungo1080G0324 Vigna mungo HOM05D003240 ORTHO05D009426 1.5e-19 100.1 125 48.0
Aa31LG10G2000 Aethionema arabicum HOM05D003240 ORTHO05D009426 2.0e-19 99.8 123 48.8
BcaC09g48486 Brassica carinata HOM05D003240 ORTHO05D009426 2.0e-19 99.8 113 46.9
Cfa020576 Carpinus fangiana HOM05D003240 ORTHO05D009426 2.0e-19 99.8 113 50.4
Gorai.009G384700 Gossypium raimondii HOM05D003240 ORTHO05D009426 4.5e-19 98.6 128 48.4
MBI07_g30192_MAGBIO Magnolia biondii HOM05D003240 ORTHO05D009426 4.5e-19 98.6 115 51.3
Phvul.005G072700 Phaseolus vulgaris HOM05D003240 ORTHO05D009426 4.5e-19 98.6 125 47.2
Gohir.A04G031760 Gossypium hirsutum HOM05D003240 ORTHO05D009426 5.9e-19 98.2 128 48.4
Gohir.A04G031920 Gossypium hirsutum HOM05D003240 ORTHO05D009426 5.9e-19 98.2 128 48.4
Gohir.D05G352600 Gossypium hirsutum HOM05D003240 ORTHO05D009426 5.9e-19 98.2 128 48.4
Hma1.2p1_0898F.1_g234470 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 5.9e-19 98.2 118 49.2
DCAR_013111 Daucus carota HOM05D003240 ORTHO05D009426 7.7e-19 97.8 78 57.7
Migut.M00801 Erythranthe guttata HOM05D003240 ORTHO05D009426 7.7e-19 97.8 165 58.8
Gorai.009G385100 Gossypium raimondii HOM05D003240 ORTHO05D009426 1.3e-18 97.1 128 47.7
Glyma.12G225100 Glycine max HOM05D003240 ORTHO05D009426 1.7e-18 96.7 126 43.7
Gorai.009G384900 Gossypium raimondii HOM05D003240 ORTHO05D009426 1.7e-18 96.7 128 47.7
Sp3g13510 Schrenkiella parvula HOM05D003240 ORTHO05D009426 1.7e-18 96.7 161 57.1
AL3G27700 Arabidopsis lyrata HOM05D003240 ORTHO05D009426 2.2e-18 96.3 123 43.1
Gohir.D05G352700 Gossypium hirsutum HOM05D003240 ORTHO05D009426 2.9e-18 95.9 128 48.4
Thhalv10022293m.g Eutrema salsugineum HOM05D003240 ORTHO05D009426 6.5e-18 94.7 161 48.4
Prupe.4G180400 Prunus persica HOM05D003240 ORTHO05D009426 8.5e-18 94.4 114 47.4
TAR627G0347 Trochodendron aralioides HOM05D003240 ORTHO05D009426 8.5e-18 94.4 69 60.9
BcaB04g20937 Brassica carinata HOM05D000882 ORTHO05D009426 1.4e-17 93.6 119 44.5
Gohir.D05G352500 Gossypium hirsutum HOM05D003240 ORTHO05D009426 1.9e-17 93.2 166 57.8
Medtr2g085370 Medicago truncatula HOM05D003240 ORTHO05D009426 1.9e-17 93.2 118 44.1
Gorai.009G384600 Gossypium raimondii HOM05D003240 ORTHO05D009426 2.5e-17 92.8 166 57.8
Gorai.009G385000 Gossypium raimondii HOM05D003240 ORTHO05D009426 2.5e-17 92.8 86 55.8
Hma1.2p1_0458F.1_g157080 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 2.5e-17 92.8 111 45.9
Carub.0003s1496 Capsella rubella HOM05D003240 ORTHO05D009426 3.2e-17 92.4 127 41.7
Cc05_g11970 Coffea canephora HOM05D003240 ORTHO05D009426 3.2e-17 92.4 157 55.4
COL.COLO4_27180 Corchorus olitorius HOM05D003240 ORTHO05D009426 3.2e-17 92.4 168 56.0
Gohir.A04G032100 Gossypium hirsutum HOM05D003240 ORTHO05D009426 5.5e-17 91.7 166 57.8
BcaNung07375 Brassica carinata HOM05D003240 ORTHO05D009426 1.6e-16 90.1 56 66.1
Hma1.2p1_0458F.1_g157090 Hydrangea macrophylla HOM05D003240 ORTHO05D009426 2.1e-16 89.7 83 53.0
CANSAT56G1752 Cannabis sativa HOM05D003240 ORTHO05D009426 3.6e-16 89.0 85 51.8
Nn4g25258 Nelumbo nucifera HOM05D003240 ORTHO05D009426 3.6e-16 89.0 116 44.0
Medtr2g085360 Medicago truncatula HOM05D003240 ORTHO05D009426 4.7e-16 88.6 120 46.7
THA.LOC104818082 Tarenaya hassleriana HOM05D003240 ORTHO05D009426 6.1e-16 88.2 120 45.0
Cfa020578 Carpinus fangiana HOM05D003240 ORTHO05D009426 8.0e-16 87.8 112 46.4
Gohir.A04G032000 Gossypium hirsutum HOM05D003240 ORTHO05D009426 3.0e-15 85.9 128 43.8
Lalb_Chr03g0042631 Lupinus albus HOM05D003240 ORTHO05D009426 3.0e-15 85.9 116 44.8
SGA_v2.0_scaffold73G24260 Striga asiatica HOM05D003240 ORTHO05D009426 1.1e-14 84.0 95 77.9
TPR.G38961 Trifolium pratense HOM05D003240 ORTHO05D009426 4.4e-14 82.0 113 45.1
TPR.G39028 Trifolium pratense HOM05D003240 ORTHO05D009426 4.4e-14 82.0 117 41.0
ATR0737G149 Amborella trichopoda HOM05D003240 ORTHO05D009426 5.7e-14 81.6 82 51.2
Glyma.13G276200 Glycine max HOM05D003240 ORTHO05D009426 1.3e-13 80.5 111 44.1
PSO541G3864 Papaver somniferum HOM05D003240 ORTHO05D009426 3.1e-12 75.9 114 38.6
PSO675G7736 Papaver somniferum HOM05D003240 ORTHO05D009426 2.0e-11 73.2 104 39.4
Nn1g04123 Nelumbo nucifera HOM05D003240 ORTHO05D009426 1.0e-10 70.9 117 37.6
unitig_37.g12571 Utricularia gibba HOM05D003240 ORTHO05D009426 9.4e-09 64.3 62 46.8
Rhsim06G0199500 Rhododendron simsii HOM05D003240 ORTHO05D009426 1.6e-08 63.5 58 53.4
Solyc02g036240.1 Solanum lycopersicum HOM05D002014 ORTHO05D001958 1.8e-07 60.1 103 35.9
Solyc02g036180.1 Solanum lycopersicum HOM05D002014 ORTHO05D001958 2.3e-07 59.7 103 35.9
Sopen02g011600 Solanum pennellii HOM05D002014 ORTHO05D001958 5.2e-07 58.5 103 35.0
PGSC0003DMG400021488 Solanum tuberosum HOM05D002014 ORTHO05D001958 5.2e-07 58.5 102 36.3
Solyc02g036220.1 Solanum lycopersicum HOM05D002014 ORTHO05D001958 6.7e-07 58.2 101 35.6


User provided reference genes

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