Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1618.9 Capsicum annuum HOM05D000040 ORTHO05D010138 2.5e-83 312.0 153 100.0
CAN.G584.52 Capsicum annuum HOM05D000040 ORTHO05D010138 1.2e-72 276.6 138 96.4
CAN.G231.28 Capsicum annuum HOM05D000040 ORTHO05D010138 2.5e-70 268.9 136 94.1
CAN.G186.21 Capsicum annuum HOM05D000040 ORTHO05D010138 2.8e-58 228.8 136 81.6
CAN.G1618.8 Capsicum annuum HOM05D000040 ORTHO05D010138 2.9e-55 218.8 136 76.5
CAN.G584.53 Capsicum annuum HOM05D000040 ORTHO05D010138 2.9e-55 218.8 136 76.5
CAN.G1618.5 Capsicum annuum HOM05D000040 ORTHO05D010138 3.6e-53 211.8 136 72.1
CAN.G231.26 Capsicum annuum HOM05D000040 ORTHO05D010138 5.7e-51 204.5 142 69.7
CAN.G584.41 Capsicum annuum HOM05D000040 ORTHO05D010138 2.8e-50 202.2 138 73.2
CAN.G231.27 Capsicum annuum HOM05D000040 ORTHO05D010138 1.1e-41 173.7 111 74.8
PGSC0003DMG400045930 Solanum tuberosum HOM05D000040 ORTHO05D010138 1.1e-41 173.7 139 66.9
CAN.G584.56 Capsicum annuum HOM05D000040 ORTHO05D010138 2.4e-41 172.6 114 71.9
Solyc07g006470.1 Solanum lycopersicum HOM05D000040 ORTHO05D010138 2.0e-40 169.5 139 64.7
Solyc07g006460.1 Solanum lycopersicum HOM05D000040 ORTHO05D010138 2.3e-39 166.0 134 62.7
Nitab4.5_0002004g0100 Nicotiana tabacum HOM05D000040 ORTHO05D010138 2.9e-39 165.6 137 57.7
Nitab4.5_0008765g0020 Nicotiana tabacum HOM05D000040 ORTHO05D010138 3.8e-39 165.2 142 58.5
Nitab4.5_0002004g0090 Nicotiana tabacum HOM05D000040 ORTHO05D010138 1.9e-38 162.9 142 57.0
PGSC0003DMG400037671 Solanum tuberosum HOM05D000040 ORTHO05D010138 3.3e-38 162.2 127 64.6
CAN.G584.51 Capsicum annuum HOM05D000040 ORTHO05D010138 1.2e-37 160.2 137 63.5
PGSC0003DMG400027447 Solanum tuberosum HOM05D000040 ORTHO05D010138 1.4e-36 156.8 138 58.0
Nitab4.5_0004847g0020 Nicotiana tabacum HOM05D000040 ORTHO05D010138 1.7e-34 149.8 143 54.5
CAN.G1618.2 Capsicum annuum HOM05D000040 ORTHO05D010138 6.4e-34 147.9 142 52.1
CAN.G584.61 Capsicum annuum HOM05D000040 ORTHO05D010138 6.4e-34 147.9 142 52.1
Nitab4.5_0008765g0010 Nicotiana tabacum HOM05D000040 ORTHO05D010138 7.0e-33 144.4 126 56.3
CAN.G1926.13 Capsicum annuum HOM05D000040 ORTHO05D010138 1.6e-32 143.3 146 50.0
CAN.G9223.1 Capsicum annuum HOM05D000040 ORTHO05D010138 2.0e-32 142.9 106 69.8
Nitab4.5_0002004g0070 Nicotiana tabacum HOM05D000040 ORTHO05D010138 2.3e-31 139.4 140 50.0
Nitab4.5_0015062g0010 Nicotiana tabacum HOM05D000040 ORTHO05D010138 3.0e-31 139.0 152 48.0
Sopen07g002550 Solanum pennellii HOM05D000040 ORTHO05D010138 1.5e-30 136.7 109 66.1
CAN.G1618.4 Capsicum annuum HOM05D000040 ORTHO05D010138 4.3e-30 135.2 137 48.2
PGSC0003DMG400037304 Solanum tuberosum HOM05D000040 ORTHO05D010138 3.6e-29 132.1 134 51.5
CAN.G584.45 Capsicum annuum HOM05D000040 ORTHO05D010138 1.4e-28 130.2 93 68.8
Solyc07g006430.1 Solanum lycopersicum HOM05D000040 ORTHO05D010138 2.3e-28 129.4 134 50.7
Solyc07g006450.1 Solanum lycopersicum HOM05D000040 ORTHO05D010138 2.0e-27 126.3 138 49.3
Nitab4.5_0007049g0010 Nicotiana tabacum HOM05D000040 ORTHO05D010138 2.6e-27 125.9 140 46.4
Solyc07g006440.1 Solanum lycopersicum HOM05D000040 ORTHO05D010138 9.8e-27 124.0 138 46.4
PGSC0003DMG400035871 Solanum tuberosum HOM05D000040 ORTHO05D010138 1.7e-26 123.2 138 47.8
Sopen07g002530 Solanum pennellii HOM05D000040 ORTHO05D010138 2.2e-26 122.9 138 48.6
Peaxi162Scf00457g00032 Petunia axillaris HOM05D000040 ORTHO05D010138 2.9e-26 122.5 140 42.1
CAN.G1618.10 Capsicum annuum HOM05D000040 ORTHO05D010138 4.1e-25 118.6 82 73.2
Sopen07g002520 Solanum pennellii HOM05D000040 ORTHO05D010138 4.1e-25 118.6 130 50.8
CAN.G584.47 Capsicum annuum HOM05D000040 ORTHO05D010138 1.7e-23 113.2 121 46.3
Nitab4.5_0007049g0020 Nicotiana tabacum HOM05D000040 ORTHO05D010138 3.9e-23 112.1 137 45.3
PGSC0003DMG400043757 Solanum tuberosum HOM05D000040 ORTHO05D010138 5.0e-23 111.7 140 45.0
CAN.G1618.15 Capsicum annuum HOM05D000040 ORTHO05D010138 6.6e-23 111.3 124 45.2
Peaxi162Scf00362g00045 Petunia axillaris HOM05D000040 ORTHO05D010138 3.3e-22 109.0 141 41.8
CAN.G1618.16 Capsicum annuum HOM05D000040 ORTHO05D010138 5.6e-22 108.2 124 42.7
CAN.G584.48 Capsicum annuum HOM05D000040 ORTHO05D010138 5.6e-22 108.2 124 43.5
Nitab4.5_0002004g0060 Nicotiana tabacum HOM05D000040 ORTHO05D010138 1.2e-21 107.1 135 44.4
Solyc01g111850.3 Solanum lycopersicum HOM05D000040 ORTHO05D010138 1.2e-21 107.1 141 41.1
Nitab4.5_0002004g0050 Nicotiana tabacum HOM05D000040 ORTHO05D010138 3.6e-21 105.5 140 41.4
Nitab4.5_0007049g0040 Nicotiana tabacum HOM05D000040 ORTHO05D010138 6.2e-21 104.8 140 44.3
PGSC0003DMG400037545 Solanum tuberosum HOM05D000040 ORTHO05D010138 8.1e-21 104.4 141 40.4
Nitab4.5_0004867g0080 Nicotiana tabacum HOM05D000040 ORTHO05D010138 1.5e-19 100.1 141 39.7
Nitab4.5_0004557g0040 Nicotiana tabacum HOM05D000040 ORTHO05D010138 1.1e-17 94.0 153 36.6
CAN.G584.54 Capsicum annuum HOM05D000040 ORTHO05D010138 2.1e-16 89.7 69 63.8
CAN.G4113.1 Capsicum annuum HOM05D000040 ORTHO05D010138 3.5e-16 89.0 116 44.0
PGSC0003DMG400036253 Solanum tuberosum HOM05D000040 ORTHO05D010138 7.8e-16 87.8 77 58.4
CAN.G1618.3 Capsicum annuum HOM05D000040 ORTHO05D010138 1.0e-15 87.4 116 44.0
CAN.G584.58 Capsicum annuum HOM05D000040 ORTHO05D010138 5.2e-12 75.1 139 35.3
Nitab4.5_0011999g0010 Nicotiana tabacum HOM05D000040 ORTHO05D010138 5.8e-11 71.6 60 61.7
Cpa.g.sc37.58 Carica papaya HOM05D000040 ORTHO05D000267 1.6e-08 63.5 144 29.9
CAN.G588.107 Capsicum annuum HOM05D000040 ORTHO05D010138 2.7e-08 62.8 86 40.7
PGSC0003DMG400041129 Solanum tuberosum HOM05D000040 ORTHO05D010138 4.6e-08 62.0 64 51.6
Atru.chr4.3137 Acer truncatum HOM05D000040 ORTHO05D010138 6.0e-08 61.6 140 30.7
MSTRG.7681 Avicennia marina HOM05D000040 ORTHO05D000759 7.8e-08 61.2 136 33.8
Hma1.2p1_0592F.1_g185320 Hydrangea macrophylla HOM05D000040 ORTHO05D000759 1.0e-07 60.8 138 29.0
TPR.G28697 Trifolium pratense HOM05D000040 ORTHO05D000267 3.9e-07 58.9 144 27.1
CAN.G1156.41 Capsicum annuum HOM05D000040 ORTHO05D000267 6.6e-07 58.2 127 29.1
Lalb_Chr08g0237901 Lupinus albus HOM05D000040 ORTHO05D000267 6.6e-07 58.2 139 28.8
THA.LOC104819569 Tarenaya hassleriana HOM05D000040 ORTHO05D000267 6.6e-07 58.2 146 27.4
DCAR_011544 Daucus carota HOM05D000040 ORTHO05D000759 8.6e-07 57.8 137 24.1
Medtr3g097150 Medicago truncatula HOM05D000040 ORTHO05D000267 8.6e-07 57.8 144 26.4
Psat5g058200 Pisum sativum HOM05D000040 ORTHO05D000267 1.1e-06 57.4 129 28.7
Solyc05g009680.1 Solanum lycopersicum HOM05D000040 ORTHO05D000759 1.1e-06 57.4 142 26.8
CAN.G3084.1 Capsicum annuum HOM05D000040 ORTHO05D010138 1.5e-06 57.0 57 50.9
CAN.G584.57 Capsicum annuum HOM05D000040 ORTHO05D010138 1.5e-06 57.0 57 50.9
Eucgr.H05072 Eucalyptus grandis HOM05D000040 ORTHO05D000267 1.5e-06 57.0 143 28.0
Nitab4.5_0013117g0010 Nicotiana tabacum HOM05D000040 ORTHO05D000267 1.5e-06 57.0 140 30.7
arahy.Tifrunner.gnm1.ann1.DS477V Arachis hypogaea HOM05D000040 ORTHO05D000267 1.9e-06 56.6 124 30.6
DCAR_013067 Daucus carota HOM05D000040 ORTHO05D000267 1.9e-06 56.6 127 29.9
Sc23g0006150 Simmondsia chinensis HOM05D000040 ORTHO05D001305 1.9e-06 56.6 131 25.2
Solyc05g056450.3 Solanum lycopersicum HOM05D000040 ORTHO05D000267 1.9e-06 56.6 127 28.3
Sopen05g034840 Solanum pennellii HOM05D000040 ORTHO05D000267 1.9e-06 56.6 127 28.3
Sopen05g005500 Solanum pennellii HOM05D000040 ORTHO05D000759 2.5e-06 56.2 142 26.8
Cc04_g07360 Coffea canephora HOM05D000040 ORTHO05D000759 3.3e-06 55.8 136 26.5
Glyma.06G158800 Glycine max HOM05D000040 ORTHO05D000267 3.3e-06 55.8 144 27.1
HanXRQChr10g0292011 Helianthus annuus HOM05D000040 ORTHO05D000759 3.3e-06 55.8 121 30.6
PGSC0003DMG400023324 Solanum tuberosum HOM05D000040 ORTHO05D000267 3.3e-06 55.8 127 27.6
Atru.chr4.3136 Acer truncatum HOM05D000040 ORTHO05D010138 5.6e-06 55.1 93 40.9
Ca_17009_v3 Cicer arietinum L. HOM05D000040 ORTHO05D000267 5.6e-06 55.1 129 28.7
Nitab4.5_0000496g0150 Nicotiana tabacum HOM05D000040 ORTHO05D000267 5.6e-06 55.1 128 26.6
PGSC0003DMG401012961 Solanum tuberosum HOM05D000040 ORTHO05D000759 5.6e-06 55.1 134 27.6
arahy.Tifrunner.gnm1.ann1.I0T1AJ Arachis hypogaea HOM05D000040 ORTHO05D000267 7.3e-06 54.7 124 29.8
Rhsim09G0110800 Rhododendron simsii HOM05D000040 ORTHO05D000759 7.3e-06 54.7 134 26.9
Cc04_g09630 Coffea canephora HOM05D000040 ORTHO05D000759 9.6e-06 54.3 136 25.7
Glyma.04G206700 Glycine max HOM05D000040 ORTHO05D000267 9.6e-06 54.3 144 27.1


User provided reference genes

Program Settings