Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1618.13 Capsicum annuum HOM05D009544 ORTHO05D011564 2.2e-148 528.9 255 100.0
CAN.G584.49 Capsicum annuum HOM05D009544 ORTHO05D011564 4.8e-95 351.7 200 85.0
CAN.G160.18 Capsicum annuum HOM05D009544 ORTHO05D011564 1.2e-74 283.9 216 64.8
CAN.G1961.1 Capsicum annuum HOM05D009544 ORTHO05D011564 1.9e-62 243.4 184 65.2
CAN.G160.16 Capsicum annuum HOM05D009544 ORTHO05D011564 2.7e-61 239.6 209 60.8
PGSC0003DMG402011202 Solanum tuberosum HOM05D009544 ORTHO05D011564 5.2e-57 225.3 223 52.5
Peaxi162Scf00420g00435 Petunia axillaris HOM05D009544 ORTHO05D011564 2.9e-55 219.5 228 51.8
CAN.G160.2 Capsicum annuum HOM05D009544 ORTHO05D011564 9.2e-54 214.5 209 54.5
PGSC0003DMG401011202 Solanum tuberosum HOM05D009544 ORTHO05D011564 9.2e-54 214.5 221 50.7
Peaxi162Scf00347g00324 Petunia axillaris HOM05D009544 ORTHO05D011564 2.1e-53 213.4 223 49.3
Peaxi162Scf00166g00727 Petunia axillaris HOM05D009544 ORTHO05D011564 7.8e-53 211.5 228 49.6
CAN.G584.20 Capsicum annuum HOM05D009544 ORTHO05D011564 1.7e-47 193.7 144 66.7
CAN.G160.6 Capsicum annuum HOM05D009544 ORTHO05D011564 4.9e-47 192.2 190 53.2
CAN.G160.5 Capsicum annuum HOM05D009544 ORTHO05D011564 1.9e-46 190.3 203 49.8
CAN.G13982.1 Capsicum annuum HOM05D009544 ORTHO05D011564 1.9e-30 137.1 109 63.3
Peaxi162Scf01313g00232 Petunia axillaris HOM05D001147 ORTHO05D000823 5.8e-24 115.5 206 39.8
PGSC0003DMG400009763 Solanum tuberosum HOM05D009544 ORTHO05D011564 1.3e-23 114.4 248 35.9
PGSC0003DMG401011155 Solanum tuberosum HOM05D009544 ORTHO05D011564 1.3e-23 114.4 116 50.9
CAN.G18680.1 Capsicum annuum HOM05D009544 ORTHO05D011564 1.7e-23 114.0 109 57.8
PGSC0003DMG400008419 Solanum tuberosum HOM05D024606 ORTHO05D011564 1.0e-20 104.8 173 38.7
PGSC0003DMG400013863 Solanum tuberosum HOM05D017506 ORTHO05D022179 1.5e-19 100.9 204 35.3
PGSC0003DMG400011848 Solanum tuberosum HOM05D009544 ORTHO05D011564 4.8e-18 95.9 89 53.9
Dinv17568 Davidia involucrata HOM05D000046 ORTHO05D004973 1.3e-15 87.8 203 31.5
SGA_v2.0_scaffold5G02851 Striga asiatica HOM05D017506 ORTHO05D011564 3.2e-14 83.2 200 30.5
Rhsim09G0138000 Rhododendron simsii HOM05D000046 ORTHO05D004973 1.2e-13 81.3 166 32.5
MD13G1120500 Malus domestica HOM05D000046 ORTHO05D004973 2.1e-13 80.5 200 29.5
Peaxi162Scf00166g00725 Petunia axillaris HOM05D002659 ORTHO05D002940 6.0e-13 79.0 70 54.3
COL.COLO4_20415 Corchorus olitorius HOM05D000046 ORTHO05D004973 1.3e-12 77.8 176 31.2
Dinv02612 Davidia involucrata HOM05D000046 ORTHO05D004973 1.9e-11 73.9 192 29.2
Dinv19543 Davidia involucrata HOM05D000046 ORTHO05D004973 3.3e-11 73.2 180 26.7
QL03p027553 Quercus lobata HOM05D000046 ORTHO05D004973 3.3e-11 73.2 174 30.5
Dinv03407 Davidia involucrata HOM05D000046 ORTHO05D004973 1.6e-10 70.9 190 29.5
Lj3A586G10 Lonicera japonica HOM05D000046 ORTHO05D004973 2.1e-10 70.5 183 29.0
Dinv04935 Davidia involucrata HOM05D000046 ORTHO05D004973 8.2e-10 68.6 177 31.1
QL07p011918 Quercus lobata HOM05D000046 ORTHO05D004973 8.2e-10 68.6 176 29.5
Lj3A585G41 Lonicera japonica HOM05D000046 ORTHO05D004973 1.4e-09 67.8 189 28.6
Dinv04924 Davidia involucrata HOM05D000046 ORTHO05D004973 1.8e-09 67.4 183 31.1
Dinv00588 Davidia involucrata HOM05D000046 ORTHO05D004973 1.2e-08 64.7 175 27.4
Dinv08386 Davidia involucrata HOM05D001277 ORTHO05D004973 1.5e-08 64.3 180 26.1
PGSC0003DMG400044954 Solanum tuberosum HOM05D009544 ORTHO05D396798 1.5e-08 64.3 57 56.1
COL.COLO4_32313 Corchorus olitorius HOM05D000046 ORTHO05D004973 2.6e-08 63.5 199 28.1
Lj2A703T54 Lonicera japonica HOM05D000046 ORTHO05D004973 2.6e-08 63.5 185 27.0
Lj2A707T13 Lonicera japonica HOM05D000046 ORTHO05D004973 2.6e-08 63.5 185 27.0
FvH4_4g23630 Fragaria vesca HOM05D000046 ORTHO05D004973 4.5e-08 62.8 169 28.4
FAN12G1200 Fragaria x ananassa HOM05D000046 ORTHO05D004973 4.5e-08 62.8 169 28.4
Hma1.2p1_1500F.1_g287320 Hydrangea macrophylla HOM05D000046 ORTHO05D004973 4.5e-08 62.8 178 25.8
Hma1.2p1_1718F.1_g299160 Hydrangea macrophylla HOM05D000046 ORTHO05D004973 7.6e-08 62.0 178 25.3
Hma1.2p1_1500F.1_g287300 Hydrangea macrophylla HOM05D000046 ORTHO05D004973 1.3e-07 61.2 189 27.5
RhsimUnG0166500 Rhododendron simsii HOM05D000046 ORTHO05D018099 1.7e-07 60.8 184 27.2
Dinv04931 Davidia involucrata HOM05D000046 ORTHO05D004973 2.2e-07 60.5 177 29.9
Lju414C5G9 Lonicera japonica HOM05D000046 ORTHO05D004973 2.2e-07 60.5 169 27.8
AUR62009188 Chenopodium quinoa HOM05D000051 ORTHO05D004973 2.9e-07 60.1 156 28.2
COL.COLO4_18336 Corchorus olitorius HOM05D000046 ORTHO05D004973 5.0e-07 59.3 177 27.1
Migut.N01885 Erythranthe guttata HOM05D000046 ORTHO05D004973 6.5e-07 58.9 181 25.4
FAN07G0274 Fragaria x ananassa HOM05D000046 ORTHO05D004973 6.5e-07 58.9 169 27.8
FAN17G1565 Fragaria x ananassa HOM05D000046 ORTHO05D004973 6.5e-07 58.9 169 27.2
Lsat_1_v5_gn_1_7980 Lactuca sativa HOM05D000237 ORTHO05D001145 1.1e-06 58.2 182 30.2
COL.COLO4_05876 Corchorus olitorius HOM05D000046 ORTHO05D004973 1.4e-06 57.8 188 27.1
EL10Ac4g09619 Beta vulgaris HOM05D000237 ORTHO05D001145 1.9e-06 57.4 177 28.2
Hma1.2p1_0981F.1_g243650 Hydrangea macrophylla HOM05D000046 ORTHO05D004973 1.9e-06 57.4 164 29.3
AUR62007707 Chenopodium quinoa HOM05D000237 ORTHO05D001145 4.2e-06 56.2 221 27.6
Migut.O00846 Erythranthe guttata HOM05D000046 ORTHO05D004973 4.2e-06 56.2 185 25.9
QL01p040242 Quercus lobata HOM05D000260 ORTHO05D000318 4.2e-06 56.2 209 27.8
Thecc.01G137700 Theobroma cacao HOM05D000237 ORTHO05D001145 4.2e-06 56.2 202 26.2
Dinv16010 Davidia involucrata HOM05D000046 ORTHO05D004973 5.5e-06 55.8 164 28.0
Rhsim12G0115000 Rhododendron simsii HOM05D000046 ORTHO05D018099 5.5e-06 55.8 168 26.2
ECA233G5233 Erigeron canadensis HOM05D000260 ORTHO05D000318 9.3e-06 55.1 175 29.1


User provided reference genes

Program Settings