Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1610.6 Capsicum annuum HOM05D009059 ORTHO05D011207 8.5e-47 189.9 89 100.0
CAN.G3387.1 Capsicum annuum HOM05D009059 ORTHO05D011207 7.9e-45 183.3 89 96.6
CAN.G1610.5 Capsicum annuum HOM05D009059 ORTHO05D011207 1.5e-43 179.1 85 97.6
CAN.G1084.27 Capsicum annuum HOM05D009059 ORTHO05D011207 1.1e-38 162.9 86 84.9
CAN.G584.67 Capsicum annuum HOM05D009059 ORTHO05D011207 1.1e-38 162.9 86 84.9
CAN.G584.65 Capsicum annuum HOM05D009059 ORTHO05D011207 1.4e-38 162.5 86 84.9
CAN.G1084.28 Capsicum annuum HOM05D009059 ORTHO05D011207 1.6e-37 159.1 84 82.1
CAN.G584.64 Capsicum annuum HOM05D009059 ORTHO05D011207 2.6e-35 151.8 86 79.1
CAN.G534.6 Capsicum annuum HOM05D009059 ORTHO05D011207 5.7e-35 150.6 83 83.1
CAN.G1084.29 Capsicum annuum HOM05D009059 ORTHO05D011207 3.3e-27 124.8 65 81.5
CAN.G1084.24 Capsicum annuum HOM05D009059 ORTHO05D011207 4.5e-24 114.4 81 61.7
CAN.G584.62 Capsicum annuum HOM05D009059 ORTHO05D011207 3.2e-22 108.2 82 62.2
Sopen11g012530 Solanum pennellii HOM05D009059 ORTHO05D011207 3.2e-22 108.2 81 60.5
Solyc11g028070.2 Solanum lycopersicum HOM05D009059 ORTHO05D011207 7.2e-22 107.1 81 60.5
CAN.G584.63 Capsicum annuum HOM05D009059 ORTHO05D011207 3.6e-21 104.8 82 59.8
Solyc11g028040.2 Solanum lycopersicum HOM05D009059 ORTHO05D011207 6.1e-21 104.0 81 59.3
Solyc07g006380.3 Solanum lycopersicum HOM05D009059 ORTHO05D011207 2.3e-20 102.1 81 59.3
Sopen07g002470 Solanum pennellii HOM05D009059 ORTHO05D011207 4.4e-19 97.8 81 56.8
Solyc07g016095.1 Solanum lycopersicum HOM05D009059 ORTHO05D011207 9.8e-19 96.7 63 66.7
Solyc07g150108.1 Solanum lycopersicum HOM05D009059 ORTHO05D011207 2.2e-18 95.5 63 65.1
Nitab4.5_0005347g0010 Nicotiana tabacum HOM05D009059 ORTHO05D011207 5.0e-15 84.3 76 56.6
CAN.G5797.1 Capsicum annuum HOM05D009059 ORTHO05D011207 2.5e-14 82.0 54 66.7
Nitab4.5_0001626g0010 Nicotiana tabacum HOM05D009059 ORTHO05D011207 2.1e-13 79.0 76 52.6
Nitab4.5_0001626g0020 Nicotiana tabacum HOM05D009059 ORTHO05D011207 2.1e-13 79.0 76 52.6
Nitab4.5_0005404g0010 Nicotiana tabacum HOM05D009059 ORTHO05D011207 3.6e-13 78.2 76 52.6
Nitab4.5_0003765g0030 Nicotiana tabacum HOM05D009059 ORTHO05D011207 6.1e-13 77.4 82 46.3
Nitab4.5_0001882g0020 Nicotiana tabacum HOM05D009059 ORTHO05D011207 4.4e-11 71.2 86 45.3
Nitab4.5_0003165g0010 Nicotiana tabacum HOM05D009059 ORTHO05D011207 1.1e-09 66.6 76 48.7
Nitab4.5_0001882g0010 Nicotiana tabacum HOM05D009059 ORTHO05D011207 1.4e-09 66.2 76 43.4
Peaxi162Scf00297g00815 Petunia axillaris HOM05D009059 ORTHO05D011207 9.2e-09 63.5 76 43.4
Peaxi162Scf00005g00041 Petunia axillaris HOM05D009059 ORTHO05D011207 4.5e-08 61.2 76 42.1
Sp2g13550 Schrenkiella parvula HOM05D001231 ORTHO05D001012 1.3e-07 59.7 47 48.9
Solyc11g028060.1 Solanum lycopersicum HOM05D009059 ORTHO05D011207 1.3e-07 59.7 44 61.4
Peaxi162Scf00297g00816 Petunia axillaris HOM05D009059 ORTHO05D011207 2.9e-07 58.5 75 37.3
Lalb_Chr16g0392501 Lupinus albus HOM05D001231 ORTHO05D001012 3.9e-07 58.2 46 45.7
AL4G27300 Arabidopsis lyrata HOM05D001231 ORTHO05D001012 5.0e-07 57.8 52 46.2
AL8G14820 Arabidopsis lyrata HOM05D001231 ORTHO05D001012 6.6e-07 57.4 56 42.9
Peaxi162Scf00005g00035 Petunia axillaris HOM05D009059 ORTHO05D011207 8.6e-07 57.0 76 39.5
Gohir.D01G023523 Gossypium hirsutum HOM05D001231 ORTHO05D001012 1.1e-06 56.6 56 44.6
Gohir.A01G045100 Gossypium hirsutum HOM05D001231 ORTHO05D001012 1.5e-06 56.2 54 38.9
AT2G31957 Arabidopsis thaliana HOM05D001231 ORTHO05D001012 2.5e-06 55.5 52 44.2
C03p57970 Brassica napus HOM05D001231 ORTHO05D001012 4.3e-06 54.7 52 42.3
BolC5t30895H Brassica oleracea HOM05D001231 ORTHO05D001012 4.3e-06 54.7 52 44.2
Thhalv10017942m.g Eutrema salsugineum HOM05D001231 ORTHO05D001012 4.3e-06 54.7 52 42.3
C02p38770 Brassica napus HOM05D001231 ORTHO05D001012 5.6e-06 54.3 52 44.2
C05p21990 Brassica napus HOM05D001231 ORTHO05D001012 5.6e-06 54.3 52 44.2
Gohir.D01G035900 Gossypium hirsutum HOM05D001231 ORTHO05D001012 5.6e-06 54.3 52 40.4
Gohir.D01G036100 Gossypium hirsutum HOM05D001231 ORTHO05D001012 5.6e-06 54.3 52 40.4
Gorai.002G043900 Gossypium raimondii HOM05D001231 ORTHO05D001012 5.6e-06 54.3 46 43.5
Gorai.002G044000 Gossypium raimondii HOM05D001231 ORTHO05D001012 5.6e-06 54.3 52 40.4
Gorai.002G044100 Gossypium raimondii HOM05D001231 ORTHO05D001012 5.6e-06 54.3 46 43.5
PSO675G5343 Papaver somniferum HOM05D001231 ORTHO05D001012 5.6e-06 54.3 53 39.6
Carub.0005s0120 Capsella rubella HOM05D001231 ORTHO05D001012 7.3e-06 53.9 56 37.5
Gorai.002G044200 Gossypium raimondii HOM05D001231 ORTHO05D001012 7.3e-06 53.9 52 40.4
Gohir.A01G045200 Gossypium hirsutum HOM05D001231 ORTHO05D001012 9.5e-06 53.5 52 40.4
Gohir.D01G036000 Gossypium hirsutum HOM05D001231 ORTHO05D001012 9.5e-06 53.5 46 43.5
PGSC0003DMG400015133 Solanum tuberosum HOM05D001231 ORTHO05D001012 9.5e-06 53.5 46 45.7


User provided reference genes

Program Settings