Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G160.12 Capsicum annuum HOM05D006325 ORTHO05D007878 6.4e-36 154.1 110 100.0
CAN.G160.11 Capsicum annuum HOM05D006325 ORTHO05D007878 6.8e-30 134.0 110 73.6
CAN.G160.10 Capsicum annuum HOM05D006325 ORTHO05D007878 5.8e-29 131.0 110 90.9
PGSC0003DMG403011204 Solanum tuberosum HOM05D006325 ORTHO05D007878 7.5e-29 130.6 110 74.5
PGSC0003DMG402022984 Solanum tuberosum HOM05D006325 ORTHO05D007878 1.9e-27 125.9 110 71.8
CAN.G2122.1 Capsicum annuum HOM05D006325 ORTHO05D007878 3.2e-27 125.2 110 88.2
PGSC0003DMG400011149 Solanum tuberosum HOM05D006325 ORTHO05D007878 1.6e-23 112.8 110 65.5
Nitab4.5_0003551g0100 Nicotiana tabacum HOM05D006325 ORTHO05D007878 8.9e-22 107.1 106 64.2
Nitab4.5_0003551g0110 Nicotiana tabacum HOM05D006325 ORTHO05D007878 1.5e-21 106.3 105 64.8
Sopen07g002010 Solanum pennellii HOM05D006325 ORTHO05D007878 4.4e-21 104.8 112 64.3
PGSC0003DMG401022984 Solanum tuberosum HOM05D006325 ORTHO05D007878 4.4e-21 104.8 110 63.6
Nitab4.5_0002611g0130 Nicotiana tabacum HOM05D006325 ORTHO05D007878 2.9e-20 102.1 110 67.3
Solyc11g020860.1 Solanum lycopersicum HOM05D006325 ORTHO05D007878 9.2e-19 97.1 110 58.2
Sopen07g002000 Solanum pennellii HOM05D006325 ORTHO05D007878 7.8e-18 94.0 110 74.5
Hma1.2p1_0594F.1_g185940 Hydrangea macrophylla HOM05D006325 ORTHO05D007878 1.3e-17 93.2 108 53.7
CAN.G2122.2 Capsicum annuum HOM05D006325 ORTHO05D007878 2.5e-16 89.0 102 68.6
Sopen11g011030 Solanum pennellii HOM05D006325 ORTHO05D007878 7.3e-16 87.4 110 58.2
CAN.G160.9 Capsicum annuum HOM05D006325 ORTHO05D007878 1.2e-15 86.7 110 69.1
PGSC0003DMG400009263 Solanum tuberosum HOM05D006325 ORTHO05D007878 1.2e-15 86.7 110 60.0
CSS0005985 Camellia sinensis var. sinensis HOM05D006325 ORTHO05D007878 8.1e-15 84.0 105 51.4
CSS0005499 Camellia sinensis var. sinensis HOM05D006325 ORTHO05D007878 1.8e-14 82.8 105 50.5
Prupe.4G084800 Prunus persica HOM05D006325 ORTHO05D007878 2.6e-13 79.0 108 61.1
MD10G1258900 Malus domestica HOM05D006325 ORTHO05D007878 5.8e-13 77.8 113 46.9
Peaxi162Scf00062g00009 Petunia axillaris HOM05D006325 ORTHO05D007878 3.8e-12 75.1 61 73.8
Phvul.002G178300 Phaseolus vulgaris HOM05D006325 ORTHO05D007878 3.8e-12 75.1 110 45.5
Phvul.002G179400 Phaseolus vulgaris HOM05D006325 ORTHO05D007878 3.8e-12 75.1 110 45.5
Nn3g20453 Nelumbo nucifera HOM05D006325 ORTHO05D007878 4.9e-12 74.7 109 46.8
Lalb_Chr13g0293971 Lupinus albus HOM05D006325 ORTHO05D007878 1.1e-11 73.6 112 46.4
Nitab4.5_0008310g0030 Nicotiana tabacum HOM05D006325 ORTHO05D007878 1.1e-11 73.6 59 71.2
Ca_18164_v3 Cicer arietinum L. HOM05D006325 ORTHO05D007878 2.4e-11 72.4 107 43.9
Psat7g080440 Pisum sativum HOM05D006325 ORTHO05D007878 2.4e-11 72.4 106 57.5
Cc00_g01980 Coffea canephora HOM05D006325 ORTHO05D007878 3.2e-11 72.0 108 44.4
Potri.011G081001 Populus trichocarpa HOM05D006325 ORTHO05D007878 3.2e-11 72.0 110 40.9
TWI09G0296 Tripterygium wilfordii HOM05D006325 ORTHO05D007878 3.2e-11 72.0 113 43.4
CiPaw.10G089300 Carya illinoinensis HOM05D006325 ORTHO05D007878 9.3e-11 70.5 107 43.9
Potri.004G133180 Populus trichocarpa HOM05D006325 ORTHO05D007878 1.2e-10 70.1 107 41.1
Sabra11G0064500 Salix brachista HOM05D006325 ORTHO05D007878 1.6e-10 69.7 110 40.0
TWI53G1846 Tripterygium wilfordii HOM05D006325 ORTHO05D007878 2.1e-10 69.3 110 56.4
Ciclev10026747m.g Citrus clementina HOM05D006325 ORTHO05D007878 3.5e-10 68.6 70 57.1
Glyma.08G099000 Glycine max HOM05D006325 ORTHO05D007878 3.5e-10 68.6 110 45.5
Thecc.06G145500 Theobroma cacao HOM05D006325 ORTHO05D007878 4.6e-10 68.2 112 43.8
QL05p055432 Quercus lobata HOM05D006325 ORTHO05D007878 7.8e-10 67.4 107 49.5
RcHm_v2.0_Chr5g0014631 Rosa chinensis HOM05D006325 ORTHO05D007878 1.3e-09 66.6 108 43.5
Ciclev10026858m.g Citrus clementina HOM05D006325 ORTHO05D007878 1.7e-09 66.2 114 42.1
Duzib192G0952 Durio zibethinus HOM05D006325 ORTHO05D007878 1.7e-09 66.2 110 49.1
Cpa.g.sc17.42 Carica papaya HOM05D006325 ORTHO05D007878 2.3e-09 65.9 107 50.5
ClCG01G024840 Citrullus lanatus HOM05D006325 ORTHO05D007878 3.0e-09 65.5 58 62.1
CiPaw.09G120800 Carya illinoinensis HOM05D006325 ORTHO05D007878 3.9e-09 65.1 107 42.1
FvH4_3g05130 Fragaria vesca HOM05D006325 ORTHO05D007878 3.9e-09 65.1 107 43.9
Medtr5g077640 Medicago truncatula HOM05D006325 ORTHO05D007878 3.9e-09 65.1 106 43.4
Psat7g080360 Pisum sativum HOM05D006325 ORTHO05D007878 3.9e-09 65.1 108 42.6
Sed0008419 Sechium edule HOM05D006325 ORTHO05D007878 3.9e-09 65.1 106 37.7
AL1G44210 Arabidopsis lyrata HOM05D006325 ORTHO05D007878 5.1e-09 64.7 64 60.9
CANSAT35G0285 Cannabis sativa HOM05D006325 ORTHO05D007878 5.1e-09 64.7 45 71.1
Medtr4g083110 Medicago truncatula HOM05D006325 ORTHO05D007878 5.1e-09 64.7 107 44.9
Ciclev10017179m.g Citrus clementina HOM05D006325 ORTHO05D007878 6.6e-09 64.3 109 41.3
Psat7g080320 Pisum sativum HOM05D006325 ORTHO05D007878 6.6e-09 64.3 106 42.5
Carub.0001s2849 Capsella rubella HOM05D006325 ORTHO05D007878 8.7e-09 63.9 61 57.4
MELO3C007112.2 Cucumis melo HOM05D006325 ORTHO05D007878 8.7e-09 63.9 111 40.5
DCAR_007876 Daucus carota HOM05D006325 ORTHO05D007878 8.7e-09 63.9 111 41.4
Eucgr.D00273 Eucalyptus grandis HOM05D006325 ORTHO05D007878 8.7e-09 63.9 59 62.7
QL04p045948 Quercus lobata HOM05D006325 ORTHO05D007878 8.7e-09 63.9 71 53.5
BcaB07g32625 Brassica carinata HOM05D006325 ORTHO05D007878 1.5e-08 63.2 74 50.0
QL04p045922 Quercus lobata HOM05D006325 ORTHO05D007878 1.5e-08 63.2 72 52.8
TPR.G13312 Trifolium pratense HOM05D006325 ORTHO05D007878 1.5e-08 63.2 106 50.0
BcaC05g27053 Brassica carinata HOM05D006325 ORTHO05D007878 1.9e-08 62.8 75 53.3
C05p29100 Brassica napus HOM05D006325 ORTHO05D007878 1.9e-08 62.8 75 53.3
BolC5t31641H Brassica oleracea HOM05D006325 ORTHO05D007878 1.9e-08 62.8 75 53.3
FAN21G1261 Fragaria x ananassa HOM05D006325 ORTHO05D007878 1.9e-08 62.8 108 50.0
Glyma.05G143000 Glycine max HOM05D006325 ORTHO05D007878 1.9e-08 62.8 59 59.3
Oeu030957.1 Olea europaea HOM05D006325 ORTHO05D007878 1.9e-08 62.8 66 59.1
BraA09t39151Z Brassica rapa HOM05D006325 ORTHO05D007878 2.5e-08 62.4 74 50.0
CsaV3_6G051960 Cucumis sativus L. HOM05D006325 ORTHO05D007878 2.5e-08 62.4 105 39.0
Lalb_Chr07g0187521 Lupinus albus HOM05D006325 ORTHO05D007878 2.5e-08 62.4 110 54.5
Manes.17G073700 Manihot esculenta HOM05D006325 ORTHO05D007878 2.5e-08 62.4 107 48.6
A09p36260 Brassica napus HOM05D006325 ORTHO05D007878 3.3e-08 62.0 75 49.3
FAN25G3009 Fragaria x ananassa HOM05D006325 ORTHO05D007878 3.3e-08 62.0 108 50.0
Sp1g26100 Schrenkiella parvula HOM05D006325 ORTHO05D007878 3.3e-08 62.0 56 57.1
TPR.G21965 Trifolium pratense HOM05D006325 ORTHO05D007878 3.3e-08 62.0 106 53.8
FAN11G2857 Fragaria x ananassa HOM05D006325 ORTHO05D007878 4.3e-08 61.6 107 51.4
Lsat_1_v5_gn_0_34220 Lactuca sativa HOM05D006325 ORTHO05D007878 4.3e-08 61.6 110 40.0
Oeu030955.1 Olea europaea HOM05D006325 ORTHO05D007878 4.3e-08 61.6 38 78.9
Nn4g26622 Nelumbo nucifera HOM05D006325 ORTHO05D007878 5.6e-08 61.2 52 63.5
Haze_05647 Corylus avellana HOM05D006325 ORTHO05D007878 1.3e-07 60.1 108 38.9
Thhalv10009295m.g Eutrema salsugineum HOM05D006325 ORTHO05D007878 1.3e-07 60.1 63 54.0
Aa31LG6G5500 Aethionema arabicum HOM05D006325 ORTHO05D007878 1.6e-07 59.7 45 64.4
FAN16G1041 Fragaria x ananassa HOM05D006325 ORTHO05D007878 2.1e-07 59.3 108 49.1
FAN16G2667 Fragaria x ananassa HOM05D006325 ORTHO05D007878 2.1e-07 59.3 108 49.1
TPR.G34042 Trifolium pratense HOM05D006325 ORTHO05D007878 2.1e-07 59.3 105 39.0
Lsat_1_v5_gn_7_27621 Lactuca sativa HOM05D006325 ORTHO05D007878 2.8e-07 58.9 118 36.4
Lj4g0007216 Lotus japonicus HOM05D006325 ORTHO05D007878 2.8e-07 58.9 110 50.0
PSO541G2396 Papaver somniferum HOM05D006325 ORTHO05D007878 2.8e-07 58.9 115 36.5
AT1G30260 Arabidopsis thaliana HOM05D006325 ORTHO05D007878 4.8e-07 58.2 58 55.2
CARHR029650 Cardamine hirsuta HOM05D006325 ORTHO05D007878 4.8e-07 58.2 47 59.6
Medtr5g077680 Medicago truncatula HOM05D006325 ORTHO05D007878 4.8e-07 58.2 46 60.9
Medtr8g079458 Medicago truncatula HOM05D006325 ORTHO05D007878 4.8e-07 58.2 46 60.9
Duzib160G0583 Durio zibethinus HOM05D006325 ORTHO05D007878 6.2e-07 57.8 56 57.1
BcaB03g13839 Brassica carinata HOM05D006325 ORTHO05D007878 8.1e-07 57.4 67 52.2
BcaC06g35496 Brassica carinata HOM05D006325 ORTHO05D007878 8.1e-07 57.4 68 50.0
A07p10030 Brassica napus HOM05D006325 ORTHO05D007878 8.1e-07 57.4 68 50.0
BolC7t42032H Brassica oleracea HOM05D006325 ORTHO05D007878 8.1e-07 57.4 68 50.0
BraA07t28796Z Brassica rapa HOM05D006325 ORTHO05D007878 8.1e-07 57.4 68 50.0
Manes.15G124400 Manihot esculenta HOM05D006325 ORTHO05D007878 8.1e-07 57.4 63 52.4
ClCG03G006550 Citrullus lanatus HOM05D006325 ORTHO05D007878 1.1e-06 57.0 111 37.8
Gohir.A05G146600 Gossypium hirsutum HOM05D006325 ORTHO05D007878 1.4e-06 56.6 57 57.9
Gohir.D05G149100 Gossypium hirsutum HOM05D006325 ORTHO05D007878 1.4e-06 56.6 57 57.9
Gorai.009G153100 Gossypium raimondii HOM05D006325 ORTHO05D007878 1.4e-06 56.6 57 57.9
Medtr4g012020 Medicago truncatula HOM05D006325 ORTHO05D007878 1.4e-06 56.6 46 58.7
Lj4g0010729 Lotus japonicus HOM05D006325 ORTHO05D007878 1.8e-06 56.2 110 43.6
MELO3C002763.2 Cucumis melo HOM05D006325 ORTHO05D007878 2.4e-06 55.8 68 47.1
Medtr1437s0010 Medicago truncatula HOM05D006325 ORTHO05D007878 3.1e-06 55.5 46 56.5


User provided reference genes

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