Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G16.6 Capsicum annuum HOM05D001582 ORTHO05D001598 2.2e-41 171.8 83 100.0
CAN.G1609.12 Capsicum annuum HOM05D001582 ORTHO05D001598 8.5e-25 116.7 121 53.7
Sopen04g005100 Solanum pennellii HOM05D001582 ORTHO05D001598 2.1e-23 112.1 121 52.1
Solyc04g009970.4 Solanum lycopersicum HOM05D001582 ORTHO05D001598 1.8e-22 109.0 121 50.4
Nitab4.5_0024546g0010 Nicotiana tabacum HOM05D001582 ORTHO05D001598 2.0e-21 105.5 121 48.8
CANSAT01G2044 Cannabis sativa HOM05D001582 ORTHO05D001598 2.6e-21 105.1 121 47.9
Dinv07121 Davidia involucrata HOM05D001582 ORTHO05D001598 7.5e-21 103.6 121 47.9
Potri.007G106000 Populus trichocarpa HOM05D001582 ORTHO05D001598 7.5e-21 103.6 121 46.3
Peaxi162Scf00528g00014 Petunia axillaris HOM05D001582 ORTHO05D001598 1.3e-20 102.8 121 47.9
CSS0013473 Camellia sinensis var. sinensis HOM05D001582 ORTHO05D001598 1.7e-20 102.4 121 47.1
Haze_17189 Corylus avellana HOM05D001582 ORTHO05D001598 1.7e-20 102.4 121 47.1
Dinv24365 Davidia involucrata HOM05D001582 ORTHO05D001598 1.7e-20 102.4 121 47.1
Nitab4.5_0003780g0020 Nicotiana tabacum HOM05D001582 ORTHO05D001598 1.7e-20 102.4 121 47.9
Sabra07G0086800 Salix brachista HOM05D001582 ORTHO05D001598 2.8e-20 101.7 121 45.5
Cfa002896 Carpinus fangiana HOM05D001582 ORTHO05D001598 4.8e-20 100.9 121 46.3
CiPaw.04G082000 Carya illinoinensis HOM05D001582 ORTHO05D001598 1.1e-19 99.8 121 46.3
vmacro12797 Vaccinium macrocarpon HOM05D001582 ORTHO05D001598 1.4e-19 99.4 121 46.3
Cpa.g.sc90.38 Carica papaya HOM05D001582 ORTHO05D001598 1.8e-19 99.0 121 44.6
Actinidia28425 Actinidia chinensis HOM05D001582 ORTHO05D001598 2.4e-19 98.6 121 46.3
COL.COLO4_16921 Corchorus olitorius HOM05D001582 ORTHO05D001598 2.4e-19 98.6 121 45.5
Hma1.2p1_0476F.1_g160800 Hydrangea macrophylla HOM05D001582 ORTHO05D001598 2.4e-19 98.6 121 45.5
Lj4C839T10 Lonicera japonica HOM05D001582 ORTHO05D001598 2.4e-19 98.6 121 44.6
Lj3g0023393 Lotus japonicus HOM05D001582 ORTHO05D001598 2.4e-19 98.6 121 44.6
TAR628G1543 Trochodendron aralioides HOM05D001582 ORTHO05D001598 2.4e-19 98.6 121 44.6
Rhsim01G0228400 Rhododendron simsii HOM05D001582 ORTHO05D001598 3.1e-19 98.2 121 45.5
Nn3g16145 Nelumbo nucifera HOM05D001582 ORTHO05D001598 4.1e-19 97.8 121 44.6
Nn3g17061 Nelumbo nucifera HOM05D001582 ORTHO05D001598 4.1e-19 97.8 121 44.6
Cc01_g06560 Coffea canephora HOM05D001582 ORTHO05D001598 5.3e-19 97.4 121 45.5
FvH4_1g11391 Fragaria vesca HOM05D001582 ORTHO05D001598 5.3e-19 97.4 121 45.5
Oeu004241.1 Olea europaea HOM05D001582 ORTHO05D001598 5.3e-19 97.4 121 44.6
Ciclev10000430m.g Citrus clementina HOM05D001582 ORTHO05D001598 7.0e-19 97.1 121 43.8
RcHm_v2.0_Chr4g0406971 Rosa chinensis HOM05D001582 ORTHO05D001598 7.0e-19 97.1 121 45.5
Psat4g141720 Pisum sativum HOM05D001582 ORTHO05D001598 1.2e-18 96.3 121 43.8
Prupe.7G172200 Prunus persica HOM05D001582 ORTHO05D001598 1.2e-18 96.3 121 43.8
QL02p001677 Quercus lobata HOM05D001582 ORTHO05D001598 1.2e-18 96.3 121 44.6
Hund13003 Selenicereus undatus HOM05D001582 ORTHO05D001598 1.2e-18 96.3 121 44.6
CSS0004749 Camellia sinensis var. sinensis HOM05D001582 ORTHO05D001598 1.6e-18 95.9 121 44.6
Duzib205G0094 Durio zibethinus HOM05D001582 ORTHO05D001598 1.6e-18 95.9 121 45.5
RcHm_v2.0_Chr2g0098941 Rosa chinensis HOM05D001582 ORTHO05D001598 2.0e-18 95.5 121 44.6
MD14G1040800 Malus domestica HOM05D001582 ORTHO05D001598 2.7e-18 95.1 121 43.8
Atru.chr4.904 Acer truncatum HOM05D001582 ORTHO05D001598 3.5e-18 94.7 121 43.8
Manes.05G206200 Manihot esculenta HOM05D001582 ORTHO05D001598 3.5e-18 94.7 121 44.6
ECA246G4675 Erigeron canadensis HOM05D001582 ORTHO05D001598 4.5e-18 94.4 121 43.0
TPR.G25039 Trifolium pratense HOM05D001582 ORTHO05D001598 5.9e-18 94.0 121 43.0
AUR62005141 Chenopodium quinoa HOM05D001582 ORTHO05D001598 7.7e-18 93.6 121 41.3
Glyma.18G182100 Glycine max HOM05D001582 ORTHO05D001598 1.0e-17 93.2 121 42.1
Gohir.A12G205500 Gossypium hirsutum HOM05D001582 ORTHO05D001598 1.0e-17 93.2 121 43.8
Medtr8g043560 Medicago truncatula HOM05D001582 ORTHO05D001598 1.0e-17 93.2 94 50.0
AUR62000833 Chenopodium quinoa HOM05D001582 ORTHO05D001598 1.3e-17 92.8 121 41.3
Sed0002053 Sechium edule HOM05D001582 ORTHO05D001598 1.3e-17 92.8 121 40.5
Lalb_Chr03g0032501 Lupinus albus HOM05D001582 ORTHO05D001598 1.7e-17 92.4 121 42.1
Medtr5g037070 Medicago truncatula HOM05D001582 ORTHO05D001598 1.7e-17 92.4 121 41.3
Medtr8g043760 Medicago truncatula HOM05D001582 ORTHO05D001598 2.9e-17 91.7 121 41.3
GSVIVG01026479001 Vitis vinifera HOM05D001582 ORTHO05D001598 2.9e-17 91.7 121 42.1
MELO3C008061.2 Cucumis melo HOM05D001582 ORTHO05D001598 3.8e-17 91.3 121 41.3
CsaV3_6G041590 Cucumis sativus L. HOM05D001582 ORTHO05D001598 3.8e-17 91.3 121 41.3
Gohir.D12G207900 Gossypium hirsutum HOM05D001582 ORTHO05D001598 3.8e-17 91.3 121 43.0
Gorai.008G223400 Gossypium raimondii HOM05D001582 ORTHO05D001598 3.8e-17 91.3 121 43.0
Thecc.03G311300 Theobroma cacao HOM05D001582 ORTHO05D001598 3.8e-17 91.3 121 43.8
BcaB04g20272 Brassica carinata HOM05D001582 ORTHO05D001598 5.0e-17 90.9 121 41.3
BcaC09g49393 Brassica carinata HOM05D001582 ORTHO05D001598 5.0e-17 90.9 121 41.3
BolC1t03677H Brassica oleracea HOM05D001582 ORTHO05D001598 5.0e-17 90.9 121 41.3
Glyma.14G089400 Glycine max HOM05D001582 ORTHO05D001598 6.5e-17 90.5 121 41.3
Phvul.011G186500 Phaseolus vulgaris HOM05D001582 ORTHO05D001598 6.5e-17 90.5 121 42.1
VMungo1127G1636 Vigna mungo HOM05D001582 ORTHO05D001598 6.5e-17 90.5 121 43.0
Ca_24117_v3 Cicer arietinum L. HOM05D001582 ORTHO05D001598 8.5e-17 90.1 121 41.3
C01p37130 Brassica napus HOM05D001582 ORTHO05D001598 1.1e-16 89.7 121 40.5
MSTRG.2650 Avicennia marina HOM05D001582 ORTHO05D001598 1.5e-16 89.4 121 40.5
ClCG01G015370 Citrullus lanatus HOM05D001582 ORTHO05D001598 1.5e-16 89.4 121 39.7
A01p29350 Brassica napus HOM05D001582 ORTHO05D001598 1.9e-16 89.0 121 40.5
BraA01t03067Z Brassica rapa HOM05D001582 ORTHO05D001598 1.9e-16 89.0 121 40.5
Eucgr.I00201 Eucalyptus grandis HOM05D001582 ORTHO05D001598 1.9e-16 89.0 121 40.5
Sp2g04190 Schrenkiella parvula HOM05D001582 ORTHO05D001598 1.9e-16 89.0 121 40.5
Rhsim10G0133600 Rhododendron simsii HOM05D003614 ORTHO05D004156 3.2e-16 88.2 68 61.8
Aa31LG2G9900 Aethionema arabicum HOM05D001582 ORTHO05D001598 4.2e-16 87.8 120 40.8
CSS0003892 Camellia sinensis var. sinensis HOM05D001582 ORTHO05D001598 4.2e-16 87.8 121 42.1
Carub.0002s0476 Capsella rubella HOM05D001582 ORTHO05D001598 4.2e-16 87.8 121 39.7
Sc07g0007690 Simmondsia chinensis HOM05D001582 ORTHO05D001598 5.5e-16 87.4 120 43.3
HPP92_011673 Vanilla planifolia HOM05D001582 ORTHO05D001598 7.2e-16 87.0 121 39.7
Migut.H00703 Erythranthe guttata HOM05D001582 ORTHO05D001598 1.6e-15 85.9 121 42.1
unitig_699.g19731 Utricularia gibba HOM05D001582 ORTHO05D001598 1.6e-15 85.9 121 39.7
DCAR_001212 Daucus carota HOM05D001582 ORTHO05D001598 2.1e-15 85.5 121 39.7
Thhalv10023307m.g Eutrema salsugineum HOM05D001582 ORTHO05D001598 2.7e-15 85.1 121 39.7
Gorai.003G185900 Gossypium raimondii HOM05D001582 ORTHO05D001598 3.6e-15 84.7 121 41.3
THA.LOC104815571 Tarenaya hassleriana HOM05D001582 ORTHO05D001598 4.7e-15 84.3 121 38.8
AL2G16040 Arabidopsis lyrata HOM05D001582 ORTHO05D001598 6.1e-15 84.0 121 38.0
Gohir.A03G000028 Gossypium hirsutum HOM05D001582 ORTHO05D001598 6.1e-15 84.0 121 41.3
PSO384G2272 Papaver somniferum HOM05D001582 ORTHO05D001598 6.1e-15 84.0 121 39.7
PSO170G3843 Papaver somniferum HOM05D001582 ORTHO05D001598 8.0e-15 83.6 121 40.5
PSO339G0691 Papaver somniferum HOM05D001582 ORTHO05D001598 8.0e-15 83.6 121 39.7
PSO407G0098 Papaver somniferum HOM05D001582 ORTHO05D001598 8.0e-15 83.6 121 40.5
Aqoxy7G03556 Aquilegia oxysepala HOM05D001582 ORTHO05D001598 1.4e-14 82.8 121 41.3
HanXRQChr11g0343831 Helianthus annuus HOM05D001582 ORTHO05D001598 1.8e-14 82.4 121 41.3
PGR119G1303 Punica granatum HOM05D001582 ORTHO05D001598 1.8e-14 82.4 121 39.7
Glyma.14G089900 Glycine max HOM05D001582 ORTHO05D001598 2.3e-14 82.0 118 40.7
Gohir.D03G176650 Gossypium hirsutum HOM05D001582 ORTHO05D001598 4.0e-14 81.3 121 40.5
ATR0796G278 Amborella trichopoda HOM05D001582 ORTHO05D001598 8.8e-14 80.1 121 38.0
SHI11468 Sapria himalayana HOM05D001582 ORTHO05D001598 8.8e-14 80.1 120 37.5
CDE02G0448 Ceratophyllum demersum HOM05D001582 ORTHO05D001598 2.6e-13 78.6 121 38.0
EL10Ac4g09347 Beta vulgaris HOM05D001582 ORTHO05D001598 4.4e-13 77.8 121 34.7
SGA_v2.0_scaffold370G50116 Striga asiatica HOM05D001582 ORTHO05D001598 4.4e-13 77.8 123 39.0
CDE02G2653 Ceratophyllum demersum HOM05D001582 ORTHO05D001598 9.8e-13 76.6 121 37.2
Os09g0309100 Oryza sativa ssp. japonica HOM05D001582 ORTHO05D001598 1.3e-12 76.3 121 38.8
CSS0043680 Camellia sinensis var. sinensis HOM05D001582 ORTHO05D001598 1.7e-12 75.9 121 39.7
Actinidia06617 Actinidia chinensis HOM05D001582 ORTHO05D001598 2.8e-12 75.1 45 80.0
Zm00001eb210830 Zea mays HOM05D001582 ORTHO05D001598 6.3e-12 73.9 121 36.4
Lsat_1_v5_gn_1_111740 Lactuca sativa HOM05D001582 ORTHO05D001598 1.4e-11 72.8 45 75.6
vmacro11992 Vaccinium macrocarpon HOM05D001582 ORTHO05D001598 1.6e-10 69.3 106 41.5
CARHR052430 Cardamine hirsuta HOM05D001582 ORTHO05D001598 5.9e-10 67.4 45 66.7
Ah.06g187800 Amaranthus hybridus HOM05D001582 ORTHO05D001598 7.7e-10 67.0 121 33.9
AT1G60560 Arabidopsis thaliana HOM05D001582 ORTHO05D001598 3.8e-09 64.7 44 68.2
Nn1g06272 Nelumbo nucifera HOM05D001582 ORTHO05D001598 2.5e-08 62.0 96 40.6
MBI04_g43356_MAGBIO Magnolia biondii HOM05D001582 ORTHO05D001598 2.7e-07 58.5 121 28.9
PSO063G7251 Papaver somniferum HOM05D001582 ORTHO05D001598 1.0e-06 56.6 121 26.4
Prupe.1G465300 Prunus persica HOM05D001582 ORTHO05D001598 1.0e-06 56.6 121 26.4
GSVIVG01035741001 Vitis vinifera HOM05D001582 ORTHO05D001598 1.0e-06 56.6 121 27.3
CANSAT25G0823 Cannabis sativa HOM05D001582 ORTHO05D001598 1.4e-06 56.2 121 25.6
FAN15G1572 Fragaria x ananassa HOM05D001582 ORTHO05D001598 1.4e-06 56.2 121 25.6
Gohir.A06G048600 Gossypium hirsutum HOM05D001582 ORTHO05D001598 1.8e-06 55.8 120 26.7
Gohir.D06G048433 Gossypium hirsutum HOM05D001582 ORTHO05D001598 1.8e-06 55.8 120 26.7
Gorai.010G054400 Gossypium raimondii HOM05D001582 ORTHO05D001598 1.8e-06 55.8 120 26.7
vmacro05463 Vaccinium macrocarpon HOM05D001582 ORTHO05D001598 1.8e-06 55.8 121 26.4
Dinv35874 Davidia involucrata HOM05D001582 ORTHO05D001598 2.3e-06 55.5 120 25.0
FvH4_2g30231 Fragaria vesca HOM05D001582 ORTHO05D001598 3.0e-06 55.1 121 24.8
FAN24G2643 Fragaria x ananassa HOM05D001582 ORTHO05D001598 3.0e-06 55.1 121 24.8
Potri.006G245800 Populus trichocarpa HOM05D001582 ORTHO05D001598 3.0e-06 55.1 121 25.6
Sabra06G0192300 Salix brachista HOM05D001582 ORTHO05D001598 3.0e-06 55.1 121 25.6
PSO782G3910 Papaver somniferum HOM05D001582 ORTHO05D001598 4.0e-06 54.7 121 25.6
MD08G1135300 Malus domestica HOM05D001582 ORTHO05D001598 5.2e-06 54.3 121 25.6
ATR1120G129 Amborella trichopoda HOM05D001582 ORTHO05D001598 8.8e-06 53.5 121 29.8


User provided reference genes

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