Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1597.6 Capsicum annuum HOM05D002907 ORTHO05D005554 6.4e-85 317.4 163 100.0
CAN.G665.23 Capsicum annuum HOM05D002907 ORTHO05D005554 4.5e-54 214.9 129 86.0
CAN.G181.45 Capsicum annuum HOM05D002907 ORTHO05D005554 1.3e-53 213.4 129 86.0
CAN.G509.9 Capsicum annuum HOM05D002907 ORTHO05D005554 4.0e-42 175.3 108 81.5
CAN.G542.9 Capsicum annuum HOM05D002907 ORTHO05D005554 1.5e-41 173.3 113 80.5
CAN.G1160.4 Capsicum annuum HOM05D002907 ORTHO05D005554 2.2e-40 169.5 110 77.3
CAN.G419.22 Capsicum annuum HOM05D002907 ORTHO05D005554 4.8e-40 168.3 102 82.4
CAN.G1243.6 Capsicum annuum HOM05D002907 ORTHO05D005554 5.0e-37 158.3 98 81.6
Sopen06g010830 Solanum pennellii HOM05D002907 ORTHO05D005554 1.3e-32 143.7 133 57.9
Nitab4.5_0002548g0050 Nicotiana tabacum HOM05D002907 ORTHO05D005554 7.0e-31 137.9 124 59.7
Solyc02g055537.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 2.0e-30 136.3 115 60.9
Nitab4.5_0002986g0060 Nicotiana tabacum HOM05D002907 ORTHO05D005554 3.5e-30 135.6 126 57.9
Sopen02g003400 Solanum pennellii HOM05D002907 ORTHO05D005554 3.5e-30 135.6 112 63.4
CAN.G98.12 Capsicum annuum HOM05D002907 ORTHO05D005554 1.0e-29 134.0 79 83.5
Solyc02g044000.3 Solanum lycopersicum HOM05D002907 ORTHO05D005554 1.7e-29 133.3 160 50.6
Nitab4.5_0000162g0050 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.3e-29 132.9 100 68.0
Nitab4.5_0002746g0010 Nicotiana tabacum HOM05D002907 ORTHO05D005554 6.6e-29 131.3 133 54.9
Nitab4.5_0000011g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 3.3e-28 129.0 123 55.3
Nitab4.5_0000248g0100 Nicotiana tabacum HOM05D002907 ORTHO05D005554 3.6e-27 125.6 97 64.9
Sopen11g022000 Solanum pennellii HOM05D002907 ORTHO05D005554 2.6e-25 119.4 127 51.2
Peaxi162Scf00386g00927 Petunia axillaris HOM05D002907 ORTHO05D005554 4.4e-25 118.6 117 58.1
Sopen09g023780 Solanum pennellii HOM05D002907 ORTHO05D005554 4.4e-25 118.6 127 51.2
Nitab4.5_0026714g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 5.7e-25 118.2 99 61.6
CAN.G1418.2 Capsicum annuum HOM05D002907 ORTHO05D005554 1.7e-24 116.7 75 78.7
Sopen01g012720 Solanum pennellii HOM05D002907 ORTHO05D005554 1.7e-24 116.7 134 51.5
PGSC0003DMG400044579 Solanum tuberosum HOM05D002907 ORTHO05D005554 1.7e-24 116.7 127 49.6
Peaxi162Scf00005g02517 Petunia axillaris HOM05D002907 ORTHO05D005554 6.3e-24 114.8 128 54.7
Solyc06g011610.1 Solanum lycopersicum HOM05D002907 ORTHO05D005554 8.3e-24 114.4 137 49.6
Solyc10g074430.2 Solanum lycopersicum HOM05D002907 ORTHO05D005554 1.6e-22 110.2 100 57.0
Peaxi162Scf00431g00511 Petunia axillaris HOM05D002907 ORTHO05D005554 2.0e-22 109.8 95 60.0
Peaxi162Scf00073g02336 Petunia axillaris HOM05D002907 ORTHO05D005554 5.9e-22 108.2 131 51.9
Peaxi162Scf00661g00421 Petunia axillaris HOM05D002907 ORTHO05D005554 5.9e-22 108.2 131 51.9
Peaxi162Scf01370g00020 Petunia axillaris HOM05D002907 ORTHO05D005554 5.9e-22 108.2 131 51.9
Peaxi162Scf00203g01424 Petunia axillaris HOM05D002907 ORTHO05D005554 1.0e-21 107.5 128 50.8
Nitab4.5_0009770g0040 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.3e-21 107.1 80 67.5
CANSAT35G0321 Cannabis sativa HOM05D002907 ORTHO05D005554 2.5e-20 102.8 103 53.4
CANSAT01G3093 Cannabis sativa HOM05D002907 ORTHO05D005554 5.6e-20 101.7 99 54.5
CANSAT01G2740 Cannabis sativa HOM05D002907 ORTHO05D005554 7.3e-20 101.3 97 54.6
CANSAT56G4249 Cannabis sativa HOM05D002907 ORTHO05D005554 9.5e-20 100.9 97 54.6
Peaxi162Scf00816g00411 Petunia axillaris HOM05D002907 ORTHO05D005554 2.1e-19 99.8 125 50.4
Nitab4.5_0000037g0130 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.5e-17 93.6 135 47.4
Nitab4.5_0000745g0100 Nicotiana tabacum HOM05D002907 ORTHO05D005554 9.8e-17 90.9 93 55.9
Nitab4.5_0000037g0150 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.7e-16 90.1 75 62.7
Nitab4.5_0000488g0170 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.7e-16 90.1 85 57.6
DCAR_027158 Daucus carota HOM05D002907 ORTHO05D005554 2.9e-16 89.4 99 49.5
DCAR_010335 Daucus carota HOM05D002907 ORTHO05D005554 2.0e-14 83.2 98 45.9
Peaxi162Scf00168g01413 Petunia axillaris HOM05D002907 ORTHO05D005554 5.0e-13 78.6 116 44.8
Nitab4.5_0008853g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.9e-12 76.6 76 53.9
Solyc12g038200.3 Solanum lycopersicum HOM05D002700 ORTHO05D003228 1.9e-12 76.6 61 63.9
Nitab4.5_0000164g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 2.5e-12 76.3 99 48.5
DCAR_024022 Daucus carota HOM05D002907 ORTHO05D005554 4.3e-12 75.5 95 42.1
DCAR_030301 Daucus carota HOM05D002907 ORTHO05D005554 2.1e-11 73.2 99 42.4
Nitab4.5_0002746g0020 Nicotiana tabacum HOM05D002907 ORTHO05D005554 1.1e-10 70.9 69 53.6
Peaxi162Scf00871g00034 Petunia axillaris HOM05D002907 ORTHO05D005554 1.2e-09 67.4 131 37.4
QL05p044516 Quercus lobata HOM05D002907 ORTHO05D000065 4.4e-09 65.5 130 31.5
QL01p044581 Quercus lobata HOM05D002907 ORTHO05D005554 5.8e-09 65.1 105 37.1
QL01p044591 Quercus lobata HOM05D002907 ORTHO05D005554 5.8e-09 65.1 105 37.1
QL93p0100_0313 Quercus lobata HOM05D000038 ORTHO05D000612 9.8e-09 64.3 109 34.9
QL07p007200 Quercus lobata HOM05D000096 ORTHO05D000045 1.7e-08 63.5 153 33.3
Lj7A628T41 Lonicera japonica HOM05D002907 ORTHO05D000065 1.1e-07 60.8 87 36.8
QL93p0160_0004 Quercus lobata HOM05D002907 ORTHO05D000065 3.2e-07 59.3 109 33.0
QL93p0160_0016 Quercus lobata HOM05D002907 ORTHO05D000065 9.2e-07 57.8 109 32.1
QL04p076347 Quercus lobata HOM05D002907 ORTHO05D000065 1.2e-06 57.4 130 30.0
Medtr4g070090 Medicago truncatula HOM05D002907 ORTHO05D000065 1.6e-06 57.0 96 35.4
Medtr5g027390 Medicago truncatula HOM05D002907 ORTHO05D000065 1.6e-06 57.0 96 35.4
QL06p039579 Quercus lobata HOM05D002907 ORTHO05D000065 1.6e-06 57.0 82 37.8
Peaxi162Scf00635g00615 Petunia axillaris HOM05D002907 ORTHO05D005554 2.1e-06 56.6 45 68.9
SGA_v2.0_scaffold106G30698 Striga asiatica HOM05D000353 ORTHO05D000174 2.1e-06 56.6 83 34.9
Hma1.2p1_0045F.1_g026410 Hydrangea macrophylla HOM05D000096 ORTHO05D000045 4.6e-06 55.5 83 32.5
Lj1A275T36 Lonicera japonica HOM05D002907 ORTHO05D000065 6.0e-06 55.1 87 33.3
SGA_v2.0_scaffold49G18365 Striga asiatica HOM05D024561 ORTHO05D002376 6.0e-06 55.1 83 33.7


User provided reference genes

Program Settings