Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1595.2 Capsicum annuum HOM05D002824 ORTHO05D007162 2.0e-68 262.3 135 100.0
Solyc00g500031.1 Solanum lycopersicum HOM05D002824 ORTHO05D007162 2.0e-68 262.3 135 100.0
Solyc00g500076.1 Solanum lycopersicum HOM05D002824 ORTHO05D007162 2.0e-68 262.3 135 100.0
CAN.G327.20 Capsicum annuum HOM05D002824 ORTHO05D007162 8.6e-67 256.9 135 98.5
Migut.D01328 Erythranthe guttata HOM05D002824 ORTHO05D007162 2.3e-64 248.8 135 94.8
PGR111G0083 Punica granatum HOM05D002824 ORTHO05D007162 3.2e-61 238.4 135 91.9
DCAR_032521 Daucus carota HOM05D002824 ORTHO05D007162 7.0e-61 237.3 135 90.4
HanXRQChr00c0394g0574541 Helianthus annuus HOM05D002824 ORTHO05D007162 1.6e-60 236.1 135 89.6
HanXRQChr01g0020211 Helianthus annuus HOM05D002824 ORTHO05D007162 1.6e-60 236.1 135 89.6
HanXRQChr10g0284391 Helianthus annuus HOM05D002824 ORTHO05D007162 1.6e-60 236.1 135 89.6
HanXRQChr10g0318051 Helianthus annuus HOM05D002824 ORTHO05D007162 1.6e-60 236.1 135 89.6
HanXRQChr11g0326971 Helianthus annuus HOM05D002824 ORTHO05D007162 1.6e-60 236.1 135 89.6
HanXRQChr12g0369861 Helianthus annuus HOM05D002824 ORTHO05D007162 1.6e-60 236.1 135 89.6
HanXRQCPg0580191 Helianthus annuus HOM05D002824 ORTHO05D007162 1.6e-60 236.1 135 89.6
Peaxi162Scf00299g00114 Petunia axillaris HOM05D002824 ORTHO05D007162 5.9e-60 234.2 125 98.4
Nn021s41522 Nelumbo nucifera HOM05D002824 ORTHO05D007162 1.0e-59 233.4 135 89.6
Cpa.g.sc0.196 Carica papaya HOM05D002824 ORTHO05D007162 1.7e-59 232.6 130 93.1
Gohir.1Z050134 Gossypium hirsutum HOM05D002824 ORTHO05D007162 2.3e-59 232.3 135 87.4
RcHm_v2.0_CPg0501871 Rosa chinensis HOM05D002824 ORTHO05D007162 2.3e-59 232.3 135 87.4
PSO548G0051 Papaver somniferum HOM05D002824 ORTHO05D007162 3.9e-59 231.5 135 91.1
TAR375G0295 Trochodendron aralioides HOM05D002824 ORTHO05D007162 6.6e-59 230.7 135 88.9
Gohir.A12G024800 Gossypium hirsutum HOM05D002824 ORTHO05D007162 4.3e-58 228.0 135 85.9
ATCG00770 Arabidopsis thaliana HOM05D002824 ORTHO05D007162 1.6e-57 226.1 135 85.2
BNapus_Darmor_BZH_scaffold_253p00350 Brassica napus HOM05D002824 ORTHO05D007162 1.6e-57 226.1 135 85.2
CARHR282250 Cardamine hirsuta HOM05D002824 ORTHO05D007162 2.1e-57 225.7 135 84.4
Gohir.A06G056900 Gossypium hirsutum HOM05D002824 ORTHO05D007162 2.1e-57 225.7 135 85.2
BolSC29t60529H Brassica oleracea HOM05D002824 ORTHO05D007162 4.7e-57 224.6 135 84.4
BolSC29t60610H Brassica oleracea HOM05D002824 ORTHO05D007162 4.7e-57 224.6 135 84.4
BolSC35t60729H Brassica oleracea HOM05D002824 ORTHO05D007162 4.7e-57 224.6 135 84.4
BraSC103t45445Z Brassica rapa HOM05D002824 ORTHO05D007162 4.7e-57 224.6 135 84.4
BraSC138t45553Z Brassica rapa HOM05D002824 ORTHO05D007162 4.7e-57 224.6 135 84.4
AL2G20560 Arabidopsis lyrata HOM05D002824 ORTHO05D007162 6.2e-57 224.2 135 84.4
AL2G21720 Arabidopsis lyrata HOM05D002824 ORTHO05D007162 6.2e-57 224.2 135 84.4
BNapus_Darmor_BZH_scaffold_287p00270 Brassica napus HOM05D002824 ORTHO05D007162 2.3e-56 222.2 135 83.7
BraSC58t46441Z Brassica rapa HOM05D002824 ORTHO05D007162 2.3e-56 222.2 135 83.7
HanXRQChr17g0554561 Helianthus annuus HOM05D002824 ORTHO05D007162 5.2e-56 221.1 135 84.4
C02p60170 Brassica napus HOM05D002824 ORTHO05D007162 1.5e-55 219.5 135 83.0
ClCG00G003160 Citrullus lanatus HOM05D002824 ORTHO05D007162 3.4e-55 218.4 131 86.3
Lalb_Chr25g0283371 Lupinus albus HOM05D002824 ORTHO05D007162 2.2e-54 215.7 135 82.2
Lalb_Chr03g0039321 Lupinus albus HOM05D002824 ORTHO05D007162 1.9e-53 212.6 135 81.5
Hund04057 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.5e-50 203.0 129 85.3
Hund08802 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.5e-50 203.0 129 85.3
Hund12527 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.5e-50 203.0 129 85.3
Hund19320 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.5e-50 203.0 129 85.3
Hund27962 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.5e-50 203.0 129 85.3
Hund27985 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.5e-50 203.0 129 85.3
Hund28109 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.5e-50 203.0 129 85.3
Hund28268 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.5e-50 203.0 129 85.3
Hund28459 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.5e-50 203.0 129 85.3
Hund28519 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.5e-50 203.0 129 85.3
Hund28529 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.5e-50 203.0 129 85.3
Hund28632 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.5e-50 203.0 129 85.3
Hund28678 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.5e-50 203.0 129 85.3
Hund28746 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.5e-50 203.0 129 85.3
Hund28759 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.5e-50 203.0 129 85.3
Hund28778 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.5e-50 203.0 129 85.3
Hund28846 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.5e-50 203.0 129 85.3
Hund29022 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.5e-50 203.0 129 85.3
Hund29036 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.5e-50 203.0 129 85.3
Hund29164 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.5e-50 203.0 129 85.3
Hund29217 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.5e-50 203.0 129 85.3
Hund29505 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.5e-50 203.0 129 85.3
Hund29525 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.5e-50 203.0 129 85.3
Hund29537 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.5e-50 203.0 129 85.3
Hund29554 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.5e-50 203.0 129 85.3
Hund29593 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.5e-50 203.0 129 85.3
Hund29605 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.5e-50 203.0 129 85.3
Hund29612 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.5e-50 203.0 129 85.3
Hund29682 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.5e-50 203.0 129 85.3
Hund30031 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.5e-50 203.0 129 85.3
Hund30272 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.5e-50 203.0 129 85.3
Hund30490 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.5e-50 203.0 129 85.3
Hund30495 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.5e-50 203.0 129 85.3
Hund30544 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.5e-50 203.0 129 85.3
Hund31501 Selenicereus undatus HOM05D002824 ORTHO05D007162 1.5e-50 203.0 129 85.3
BraA06t25384Z Brassica rapa HOM05D002824 ORTHO05D007162 1.9e-50 202.6 134 79.1
Gohir.D11G307000 Gossypium hirsutum HOM05D002824 ORTHO05D007162 4.3e-50 201.4 118 85.6
Gohir.A05G396400 Gossypium hirsutum HOM05D002824 ORTHO05D007162 1.6e-49 199.5 114 86.8
Hund27578 Selenicereus undatus HOM05D002824 ORTHO05D007162 4.7e-49 198.0 127 85.0
Gohir.D01G102138 Gossypium hirsutum HOM05D002824 ORTHO05D007162 2.3e-48 195.7 117 86.3
HanXRQChr11g0345281 Helianthus annuus HOM05D002824 ORTHO05D007162 2.3e-48 195.7 118 85.6
LjContig00319g0012184 Lotus japonicus HOM05D000964 ORTHO05D004047 2.3e-48 195.7 130 79.2
LjContig00319g0026138 Lotus japonicus HOM05D000964 ORTHO05D004047 2.3e-48 195.7 130 79.2
Lalb_Chr23g0274241 Lupinus albus HOM05D002824 ORTHO05D007162 3.1e-48 195.3 135 74.8
HanXRQChr00c0925g0577901 Helianthus annuus HOM05D002824 ORTHO05D007162 5.2e-48 194.5 123 83.7
Lsat_1_v5_gn_1_116300 Lactuca sativa HOM05D002824 ORTHO05D007162 7.5e-47 190.7 131 79.4
BolC9t57548H Brassica oleracea HOM05D002824 ORTHO05D007162 1.3e-46 189.9 117 83.8
LjContig00318g0002732 Lotus japonicus HOM05D002824 ORTHO05D007162 8.3e-46 187.2 135 74.8
Medtr4g034810 Medicago truncatula HOM05D002824 ORTHO05D007162 1.4e-45 186.4 118 81.4
Medtr4g059910 Medicago truncatula HOM05D002824 ORTHO05D007162 6.0e-44 181.0 104 85.6
Gorai.003G111500 Gossypium raimondii HOM05D002824 ORTHO05D007162 3.9e-43 178.3 118 78.8
Hund29957 Selenicereus undatus HOM05D002824 ORTHO05D007162 6.6e-43 177.6 115 84.3
Gohir.D03G105400 Gossypium hirsutum HOM05D002824 ORTHO05D007162 8.6e-43 177.2 118 78.0
Gohir.A12G228400 Gossypium hirsutum HOM05D002824 ORTHO05D007162 1.5e-39 166.4 91 91.2
SEGI_33981 Sequoiadendron giganteum HOM05D002824 ORTHO05D007162 5.8e-39 164.5 135 63.7
Eucgr.E03558 Eucalyptus grandis HOM05D002824 ORTHO05D007162 8.4e-38 160.6 112 75.9
Nitab4.5_0000173g0110 Nicotiana tabacum HOM05D002824 ORTHO05D007162 1.6e-36 156.4 85 96.5
Nitab4.5_0011882g0040 Nicotiana tabacum HOM05D002824 ORTHO05D007162 2.7e-36 155.6 82 97.6
Gorai.005G065900 Gossypium raimondii HOM05D002824 ORTHO05D007162 1.1e-34 150.2 97 80.4
GSVIVG01014320001 Vitis vinifera HOM05D002824 ORTHO05D007162 4.3e-34 148.3 93 84.9
BolC7t41708H Brassica oleracea HOM05D002824 ORTHO05D007162 5.6e-34 147.9 94 81.9
Gohir.D08G194656 Gossypium hirsutum HOM05D002824 ORTHO05D007162 1.7e-30 136.3 135 58.5
Thhalv10027382m.g Eutrema salsugineum HOM05D002824 ORTHO05D007162 2.2e-30 136.0 87 80.5
Gohir.D08G062280 Gossypium hirsutum HOM05D002824 ORTHO05D007162 8.4e-30 134.0 135 57.8
Phvul.001G158000 Phaseolus vulgaris HOM05D002824 ORTHO05D007162 7.1e-29 131.0 99 67.7
C09p46990 Brassica napus HOM05D002824 ORTHO05D007162 9.3e-29 130.6 82 81.7
Nitab4.5_0020737g0030 Nicotiana tabacum HOM05D002824 ORTHO05D007162 9.3e-29 130.6 79 88.6
EL10As15g24111 Beta vulgaris HOM05D002824 ORTHO05D007162 2.1e-25 119.4 93 66.7
Gorai.013G136400 Gossypium raimondii HOM05D002824 ORTHO05D007162 4.0e-24 115.2 70 82.9
arahy.Tifrunner.gnm1.ann1.BAD1H7 Arachis hypogaea HOM05D002824 ORTHO05D007162 6.9e-24 114.4 90 71.1
SMO086G0055 Selaginella moellendorffii HOM05D002824 ORTHO05D007162 9.0e-24 114.0 134 49.3
MBI05_g05353_MAGBIO Magnolia biondii HOM05D002824 ORTHO05D007162 1.2e-23 113.6 77 79.2
Gohir.D13G121750 Gossypium hirsutum HOM05D002824 ORTHO05D007162 1.1e-21 107.1 70 80.0
Lalb_Chr20g0114531 Lupinus albus HOM05D002824 ORTHO05D007162 1.9e-21 106.3 70 78.6
Nitab4.5_0000173g0100 Nicotiana tabacum HOM05D000964 ORTHO05D001488 5.4e-21 104.8 55 98.2
Hund30069 Selenicereus undatus HOM05D002824 ORTHO05D008771 1.2e-20 103.6 63 87.3
Gohir.A08G063166 Gossypium hirsutum HOM05D002824 ORTHO05D007162 1.9e-18 96.3 58 81.0
BolSC56t61248H Brassica oleracea HOM05D002824 ORTHO05D007162 2.5e-18 95.9 58 82.8
BraSC59t46570Z Brassica rapa HOM05D002824 ORTHO05D007162 2.5e-18 95.9 58 82.8
MELO3C027652.2 Cucumis melo HOM05D002824 ORTHO05D007162 4.3e-18 95.1 60 83.3
HanXRQChr00c0593g0576371 Helianthus annuus HOM05D002824 ORTHO05D007162 1.1e-16 90.5 58 81.0
HanXRQChr04g0127481 Helianthus annuus HOM05D002824 ORTHO05D007162 1.1e-16 90.5 58 81.0
HanXRQChr11g0321101 Helianthus annuus HOM05D002824 ORTHO05D007162 1.1e-16 90.5 58 81.0
BolSC35t60670H Brassica oleracea HOM05D002824 ORTHO05D007162 2.0e-15 86.3 58 75.9
BolSC49t61163H Brassica oleracea HOM05D002824 ORTHO05D007162 2.0e-15 86.3 53 83.0
MELO3C026355.2 Cucumis melo HOM05D002824 ORTHO05D007162 2.0e-15 86.3 58 77.6
Medtr3g035490 Medicago truncatula HOM05D001133 ORTHO05D000941 2.6e-15 85.9 52 80.8
FAN18G2960 Fragaria x ananassa HOM05D015635 ORTHO05D007162 4.9e-14 81.6 56 73.2
SGA_v2.0_scaffold208G41997 Striga asiatica HOM05D002824 ORTHO05D007162 4.9e-14 81.6 50 86.0
BraSC103t45484Z Brassica rapa HOM05D002824 ORTHO05D007162 2.4e-13 79.3 59 71.2
BraSC58t46502Z Brassica rapa HOM05D002824 ORTHO05D007162 4.2e-13 78.6 58 70.7
Hund08020 Selenicereus undatus HOM05D002824 ORTHO05D007162 9.3e-13 77.4 78 57.7
MELO3C033570.2 Cucumis melo HOM05D002824 ORTHO05D007162 1.6e-12 76.6 60 73.3
SEGI_01834 Sequoiadendron giganteum HOM05D000964 ORTHO05D003870 2.1e-12 76.3 56 66.1
SEGI_02369 Sequoiadendron giganteum HOM05D000964 ORTHO05D004047 2.1e-12 76.3 56 66.1
SEGI_04931 Sequoiadendron giganteum HOM05D000964 ORTHO05D004047 2.1e-12 76.3 56 66.1
SEGI_09600 Sequoiadendron giganteum HOM05D000964 ORTHO05D003870 2.1e-12 76.3 56 66.1
SEGI_17120 Sequoiadendron giganteum HOM05D000964 ORTHO05D004047 2.1e-12 76.3 56 66.1
SEGI_22757 Sequoiadendron giganteum HOM05D000964 ORTHO05D004047 2.1e-12 76.3 56 66.1
SEGI_27642 Sequoiadendron giganteum HOM05D000964 ORTHO05D003870 2.1e-12 76.3 56 66.1
SEGI_30352 Sequoiadendron giganteum HOM05D000964 ORTHO05D003870 6.0e-12 74.7 56 64.3
arahy.Tifrunner.gnm1.ann1.TW2HF4 Arachis hypogaea HOM05D000216 ORTHO05D000634 1.8e-08 63.2 51 68.6
BraSC143t45637Z Brassica rapa HOM05D002824 ORTHO05D007162 1.5e-07 60.1 39 76.9
CSS0027777 Camellia sinensis var. sinensis HOM05D002824 ORTHO05D007162 2.6e-07 59.3 83 51.8
arahy.Tifrunner.gnm1.ann1.CYZ3KW Arachis hypogaea HOM05D001828 ORTHO05D001745 1.7e-06 56.6 42 69.0
ClCG10G008280 Citrullus lanatus HOM05D002824 ORTHO05D007162 1.7e-06 56.6 36 80.6


User provided reference genes

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