Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1588.1 Capsicum annuum HOM05D007543 ORTHO05D009555 4.4e-199 698.4 539 100.0
PGSC0003DMG400011574 Solanum tuberosum HOM05D007543 ORTHO05D009555 8.0e-108 395.2 225 81.3
Nitab4.5_0003136g0030 Nicotiana tabacum HOM05D007543 ORTHO05D009555 1.8e-99 367.5 255 69.0
Nitab4.5_0000451g0150 Nicotiana tabacum HOM05D007543 ORTHO05D009555 5.8e-98 362.5 224 73.7
CiPaw.01G206300 Carya illinoinensis HOM05D007543 ORTHO05D009555 7.3e-85 318.9 207 68.1
QL06p022584 Quercus lobata HOM05D007543 ORTHO05D009555 7.3e-85 318.9 208 68.8
COL.COLO4_05738 Corchorus olitorius HOM05D007543 ORTHO05D009555 2.8e-84 317.0 222 65.3
Hma1.2p1_1076F.1_g254630 Hydrangea macrophylla HOM05D007543 ORTHO05D009555 4.8e-84 316.2 206 68.4
Manes.15G048300 Manihot esculenta HOM05D007543 ORTHO05D009555 4.8e-84 316.2 210 67.1
Thecc.04G215800 Theobroma cacao HOM05D007543 ORTHO05D009555 6.2e-84 315.8 207 67.1
Atru.chr4.1820 Acer truncatum HOM05D007543 ORTHO05D009555 8.1e-84 315.5 208 66.8
Potri.010G060800 Populus trichocarpa HOM05D007543 ORTHO05D009555 1.1e-83 315.1 229 61.6
Duzib151G0611 Durio zibethinus HOM05D007543 ORTHO05D009555 1.4e-83 314.7 206 66.5
CiPaw.02G128000 Carya illinoinensis HOM05D007543 ORTHO05D009555 2.6e-82 310.5 208 65.9
Potri.008G175200 Populus trichocarpa HOM05D007543 ORTHO05D009555 7.6e-82 308.9 228 60.5
Nn1g03077 Nelumbo nucifera HOM05D007543 ORTHO05D009555 9.9e-82 308.5 243 58.8
Actinidia35927 Actinidia chinensis HOM05D007543 ORTHO05D009555 2.2e-81 307.4 214 65.4
Ciclev10005680m.g Citrus clementina HOM05D007543 ORTHO05D009555 9.3e-80 302.0 209 64.6
ClCG05G003720 Citrullus lanatus HOM05D007543 ORTHO05D009555 3.5e-79 300.1 213 62.4
HanXRQChr01g0022581 Helianthus annuus HOM05D007543 ORTHO05D009555 3.5e-79 300.1 210 64.8
TWI53G0267 Tripterygium wilfordii HOM05D007543 ORTHO05D009555 2.3e-78 297.4 214 62.6
Rhsim09G0045000 Rhododendron simsii HOM05D007543 ORTHO05D009555 3.9e-78 296.6 234 58.5
TAR362G0720 Trochodendron aralioides HOM05D007543 ORTHO05D009555 2.5e-77 293.9 208 63.5
CsaV3_3G011440 Cucumis sativus L. HOM05D007543 ORTHO05D009555 1.8e-75 287.7 215 60.9
DCAR_002284 Daucus carota HOM05D007543 ORTHO05D009555 1.8e-75 287.7 205 64.4
CSS0020488 Camellia sinensis var. sinensis HOM05D007543 ORTHO05D009555 9.0e-75 285.4 244 56.6
Sed0003983 Sechium edule HOM05D007543 ORTHO05D009555 1.5e-74 284.6 209 60.8
Lsat_1_v5_gn_1_76300 Lactuca sativa HOM05D007543 ORTHO05D009555 2.0e-74 284.3 202 63.9
Sc19g0005790 Simmondsia chinensis HOM05D007543 ORTHO05D009555 5.8e-74 282.7 205 59.0
Ciclev10005675m.g Citrus clementina HOM05D007543 ORTHO05D009555 2.9e-73 280.4 210 61.9
ATR0787G197 Amborella trichopoda HOM05D007543 ORTHO05D009555 3.8e-73 280.0 205 62.0
PSO764G0201 Papaver somniferum HOM05D007543 ORTHO05D009555 1.9e-72 277.7 206 60.7
SEGI_36435 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 2.4e-72 277.3 205 62.0
EL10Ac3g06745 Beta vulgaris HOM05D007543 ORTHO05D009555 3.2e-72 276.9 202 61.4
Os07g0170800 Oryza sativa ssp. japonica HOM05D007543 ORTHO05D009555 1.6e-71 274.6 205 60.0
Lsat_1_v5_gn_0_4520 Lactuca sativa HOM05D007543 ORTHO05D009555 3.5e-71 273.5 203 61.6
Zm00001eb222310 Zea mays HOM05D007543 ORTHO05D009555 6.0e-71 272.7 205 57.6
Lsat_1_v5_gn_2_41901 Lactuca sativa HOM05D007543 ORTHO05D009555 1.5e-69 268.1 204 60.8
vmacro00522 Vaccinium macrocarpon HOM05D007543 ORTHO05D009555 1.9e-69 267.7 231 55.4
Lsat_1_v5_gn_0_4560 Lactuca sativa HOM05D007543 ORTHO05D009555 1.3e-68 265.0 202 60.4
Actinidia25090 Actinidia chinensis HOM05D007543 ORTHO05D009555 9.0e-67 258.8 170 64.1
Sabra08G0133600 Salix brachista HOM05D007543 ORTHO05D009555 2.0e-66 257.7 208 56.7
Lsat_1_v5_gn_1_76260 Lactuca sativa HOM05D007543 ORTHO05D009555 1.7e-65 254.6 228 54.4
Migut.G00602 Erythranthe guttata HOM05D007543 ORTHO05D009555 8.4e-65 252.3 175 63.4
Lsat_1_v5_gn_1_76220 Lactuca sativa HOM05D007543 ORTHO05D009555 4.2e-64 250.0 222 55.0
Haze_11534 Corylus avellana HOM05D007543 ORTHO05D009555 3.5e-63 246.9 250 50.0
MELO3C006351.2 Cucumis melo HOM05D007543 ORTHO05D009555 1.1e-59 235.3 224 50.9
PSO832G0138 Papaver somniferum HOM05D007543 ORTHO05D009555 4.1e-51 206.8 159 58.5
AagrBONN_evm.TU.Sc2ySwM_344.4995 Anthoceros agrestis HOM05D007543 ORTHO05D008526 1.7e-49 201.4 241 41.9
Cfa014866 Carpinus fangiana HOM05D007543 ORTHO05D009555 5.0e-49 199.9 120 65.8
Eucgr.H02864 Eucalyptus grandis HOM05D007543 ORTHO05D009555 4.2e-48 196.8 138 65.2
RcHm_v2.0_Chr4g0396531 Rosa chinensis HOM05D007543 ORTHO05D009555 1.6e-47 194.9 144 63.2
AUR62035334 Chenopodium quinoa HOM05D007543 ORTHO05D009555 2.1e-47 194.5 125 63.2
Cc03_g07030 Coffea canephora HOM05D007543 ORTHO05D009555 2.7e-47 194.1 120 64.2
SMO142G0023 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 3.6e-47 193.7 222 43.7
HanXRQChr01g0022591 Helianthus annuus HOM05D007543 ORTHO05D009555 6.1e-47 193.0 208 47.6
AUR62035905 Chenopodium quinoa HOM05D007543 ORTHO05D009555 1.0e-46 192.2 205 45.4
Solyc09g091160.1 Solanum lycopersicum HOM05D007543 ORTHO05D009555 6.7e-46 189.5 98 80.6
Peaxi162Scf00047g00165 Petunia axillaris HOM05D007543 ORTHO05D009555 2.5e-45 187.6 98 79.6
GSVIVG01029024001 Vitis vinifera HOM05D007543 ORTHO05D009555 1.7e-44 184.9 125 66.4
Lj6A641T47 Lonicera japonica HOM05D007543 ORTHO05D009555 1.1e-43 182.2 108 68.5
CANSAT78G0099 Cannabis sativa HOM05D007543 ORTHO05D009555 1.8e-43 181.4 122 61.5
MD13G1227800 Malus domestica HOM05D007543 ORTHO05D009555 1.5e-42 178.3 112 65.2
FAN07G2337 Fragaria x ananassa HOM05D007543 ORTHO05D009555 2.0e-42 177.9 125 60.8
MBI10_g16799_MAGBIO Magnolia biondii HOM05D007543 ORTHO05D009555 1.3e-41 175.3 110 64.5
HanXRQChr06g0183251 Helianthus annuus HOM05D007543 ORTHO05D009555 6.1e-39 166.4 105 65.7
SMO358G0284 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 1.0e-38 165.6 211 40.8
ECA248G0596 Erigeron canadensis HOM05D007543 ORTHO05D009555 3.0e-38 164.1 103 63.1
unitig_0.g2250 Utricularia gibba HOM05D007543 ORTHO05D009555 1.1e-37 162.2 103 61.2
SalBow2G1589 Salvia bowleyana HOM05D007543 ORTHO05D009555 1.7e-36 158.3 102 64.7
Mapoly0044s0133 Marchantia polymorpha HOM05D007543 ORTHO05D009555 3.1e-35 154.1 196 38.3
HanXRQChr06g0183241 Helianthus annuus HOM05D007543 ORTHO05D009555 1.2e-34 152.1 140 55.7
AagrBONN_evm.TU.Sc2ySwM_368.1268 Anthoceros agrestis HOM05D007543 ORTHO05D009555 7.2e-32 142.9 201 37.8
Dinv29773 Davidia involucrata HOM05D007543 ORTHO05D009555 2.3e-30 137.9 86 62.8
AagrBONN_evm.TU.Sc2ySwM_117.1924 Anthoceros agrestis HOM05D007543 ORTHO05D009555 8.8e-30 136.0 198 36.4
MD13G1227700 Malus domestica HOM05D007543 ORTHO05D009555 6.3e-28 129.8 101 60.4
Hund24855 Selenicereus undatus HOM05D007543 ORTHO05D009555 6.5e-25 119.8 73 61.6
SMO356G0252 Selaginella moellendorffii HOM05D007543 ORTHO05D009555 9.4e-24 115.9 184 35.9
SEGI_36569 Sequoiadendron giganteum HOM05D007543 ORTHO05D009555 1.2e-23 115.5 192 33.9
Pp3c4_1040 Physcomitrium patens HOM05D007543 ORTHO05D009555 3.6e-23 114.0 204 34.8
FAN11G1069 Fragaria x ananassa HOM05D007543 ORTHO05D009555 5.7e-21 106.7 204 32.4
Sopen09g034130 Solanum pennellii HOM05D007543 ORTHO05D009555 9.8e-21 105.9 93 62.4
Dinv29774 Davidia involucrata HOM05D007543 ORTHO05D009555 4.8e-20 103.6 79 64.6
Solyc09g091150.2 Solanum lycopersicum HOM05D007543 ORTHO05D009555 2.4e-19 101.3 93 61.3
AagrBONN_evm.TU.Sc2ySwM_344.5003 Anthoceros agrestis HOM05D007543 ORTHO05D009555 5.4e-19 100.1 99 50.5
Cc03_g07020 Coffea canephora HOM05D007543 ORTHO05D009555 9.8e-13 79.3 63 58.7
Cre10.g418851 Chlamydomonas reinhardtii HOM05D007543 ORTHO05D009555 1.4e-11 75.5 212 28.8
Migut.G00601 Erythranthe guttata HOM05D007543 ORTHO05D009555 1.1e-08 65.9 85 50.6
Ciclev10006635m.g Citrus clementina HOM05D007543 ORTHO05D009555 2.8e-07 61.2 124 32.3
Cpa.g.sc59.61 Carica papaya HOM05D007543 ORTHO05D009555 4.7e-07 60.5 52 59.6
Lj6C641T2 Lonicera japonica HOM05D007543 ORTHO05D009555 6.1e-07 60.1 46 67.4
Potri.010G061000 Populus trichocarpa HOM05D007543 ORTHO05D009555 8.0e-07 59.7 70 47.1
SalBow2G0410 Salvia bowleyana HOM05D007543 ORTHO05D009555 5.2e-06 57.0 48 62.5


User provided reference genes

Program Settings