Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1586.1 Capsicum annuum HOM05D003886 ORTHO05D004587 9.8e-141 503.4 253 100.0
Solyc02g032300.3 Solanum lycopersicum HOM05D003886 ORTHO05D004587 2.4e-102 375.9 236 83.1
Sopen02g010650 Solanum pennellii HOM05D003886 ORTHO05D004587 2.4e-102 375.9 236 83.1
Peaxi162Scf00198g01528 Petunia axillaris HOM05D003886 ORTHO05D004587 3.2e-91 339.0 236 76.7
Dinv30973 Davidia involucrata HOM05D003886 ORTHO05D004587 2.8e-79 299.3 238 66.0
Peaxi162Scf00048g01418 Petunia axillaris HOM05D003886 ORTHO05D004587 2.8e-79 299.3 236 67.8
Dinv24535 Davidia involucrata HOM05D003886 ORTHO05D004587 2.4e-78 296.2 237 65.8
Migut.N00997 Erythranthe guttata HOM05D003886 ORTHO05D004587 1.2e-77 293.9 236 67.4
GSVIVG01000280001 Vitis vinifera HOM05D003886 ORTHO05D004587 2.6e-77 292.7 239 65.3
CAN.G809.69 Capsicum annuum HOM05D003886 ORTHO05D004587 1.9e-75 286.6 236 66.1
PGSC0003DMG400017734 Solanum tuberosum HOM05D003886 ORTHO05D004587 2.5e-75 286.2 236 66.1
CSS0041623 Camellia sinensis var. sinensis HOM05D003886 ORTHO05D004587 9.4e-75 284.3 246 61.8
Sopen02g026260 Solanum pennellii HOM05D003886 ORTHO05D004587 1.6e-74 283.5 236 65.3
Nitab4.5_0006794g0050 Nicotiana tabacum HOM05D003886 ORTHO05D004587 4.7e-74 282.0 236 67.4
Nitab4.5_0013482g0010 Nicotiana tabacum HOM05D003886 ORTHO05D004587 1.8e-73 280.0 236 66.5
MSTRG.27896 Avicennia marina HOM05D003886 ORTHO05D004587 5.2e-73 278.5 237 63.3
Solyc02g081650.3 Solanum lycopersicum HOM05D003886 ORTHO05D004587 6.7e-73 278.1 236 64.0
vmacro01641 Vaccinium macrocarpon HOM05D003886 ORTHO05D004587 6.7e-73 278.1 237 63.3
Actinidia17720 Actinidia chinensis HOM05D003886 ORTHO05D004587 8.8e-73 277.7 237 64.1
Rhsim11G0111800 Rhododendron simsii HOM05D003886 ORTHO05D004587 5.7e-72 275.0 237 64.1
Cfa002157 Carpinus fangiana HOM05D003886 ORTHO05D004587 2.8e-71 272.7 238 62.2
Prupe.3G028400 Prunus persica HOM05D003886 ORTHO05D004587 8.2e-71 271.2 237 61.2
CSS0008969 Camellia sinensis var. sinensis HOM05D003886 ORTHO05D004587 1.4e-70 270.4 237 61.2
QL05p085089 Quercus lobata HOM05D003886 ORTHO05D004587 1.4e-70 270.4 237 62.0
Eucgr.F04066 Eucalyptus grandis HOM05D003886 ORTHO05D004587 2.4e-70 269.6 237 59.5
CiPaw.01G092000 Carya illinoinensis HOM05D003886 ORTHO05D004587 1.6e-69 266.9 236 60.6
Atru.chr3.1841 Acer truncatum HOM05D003886 ORTHO05D004587 5.9e-69 265.0 237 61.2
MD17G1156900 Malus domestica HOM05D003886 ORTHO05D004587 5.9e-69 265.0 237 58.6
SGA_v2.0_scaffold8G04472 Striga asiatica HOM05D003886 ORTHO05D004587 5.9e-69 265.0 245 61.6
DCAR_022329 Daucus carota HOM05D003886 ORTHO05D004587 1.0e-68 264.2 237 60.8
TWI75G0340 Tripterygium wilfordii HOM05D003886 ORTHO05D004587 1.0e-68 264.2 237 60.8
Actinidia11710 Actinidia chinensis HOM05D003886 ORTHO05D004587 1.7e-68 263.5 227 64.3
Lj5C312G11 Lonicera japonica HOM05D003886 ORTHO05D004587 1.7e-68 263.5 248 60.1
MD09G1170200 Malus domestica HOM05D003886 ORTHO05D004587 1.7e-68 263.5 237 59.1
Nn7g35782 Nelumbo nucifera HOM05D003886 ORTHO05D004587 1.7e-68 263.5 234 59.8
HanXRQChr17g0570801 Helianthus annuus HOM05D003886 ORTHO05D004587 2.2e-68 263.1 237 60.3
Cc02_g36820 Coffea canephora HOM05D003886 ORTHO05D004587 3.8e-68 262.3 238 62.6
ECA234G0089 Erigeron canadensis HOM05D003886 ORTHO05D004587 3.8e-68 262.3 234 62.4
Ciclev10020009m.g Citrus clementina HOM05D003886 ORTHO05D004587 5.0e-68 261.9 234 62.0
unitig_699.g19834 Utricularia gibba HOM05D003886 ORTHO05D004587 8.5e-68 261.2 228 61.4
Ciclev10021199m.g Citrus clementina HOM05D003886 ORTHO05D004587 1.1e-67 260.8 234 61.5
Thecc.06G049000 Theobroma cacao HOM05D003886 ORTHO05D004587 1.1e-67 260.8 238 60.5
Oeu010600.1 Olea europaea HOM05D003886 ORTHO05D004587 1.5e-67 260.4 234 60.7
Gohir.D10G001000 Gossypium hirsutum HOM05D003886 ORTHO05D004587 3.2e-67 259.2 238 60.1
Gorai.011G001300 Gossypium raimondii HOM05D003886 ORTHO05D004587 3.2e-67 259.2 238 60.1
Lj2g0000910 Lotus japonicus HOM05D003886 ORTHO05D004587 3.2e-67 259.2 237 60.8
Duzib235G0758 Durio zibethinus HOM05D003886 ORTHO05D004587 4.2e-67 258.8 237 59.9
FAN14G2559 Fragaria x ananassa HOM05D003886 ORTHO05D004587 4.2e-67 258.8 237 58.2
RcHm_v2.0_Chr2g0148321 Rosa chinensis HOM05D003886 ORTHO05D004587 7.2e-67 258.1 238 58.4
TWI12G0365 Tripterygium wilfordii HOM05D003886 ORTHO05D004587 9.4e-67 257.7 237 59.1
VMungo0464G1314 Vigna mungo HOM05D003886 ORTHO05D004587 1.2e-66 257.3 237 60.3
Oeu000173.4 Olea europaea HOM05D003886 ORTHO05D004587 1.6e-66 256.9 317 48.9
FvH4_6g36310 Fragaria vesca HOM05D003886 ORTHO05D004587 2.1e-66 256.5 237 57.8
FAN14G1097 Fragaria x ananassa HOM05D003886 ORTHO05D004587 2.7e-66 256.1 237 57.8
MBI14_g11787_MAGBIO Magnolia biondii HOM05D003886 ORTHO05D004587 3.6e-66 255.8 236 59.7
FAN09G1502 Fragaria x ananassa HOM05D003886 ORTHO05D004587 4.7e-66 255.4 237 57.8
Ca_17750_v3 Cicer arietinum L. HOM05D003886 ORTHO05D004587 6.1e-66 255.0 238 60.1
FAN05G1128 Fragaria x ananassa HOM05D003886 ORTHO05D004587 8.0e-66 254.6 237 57.8
Oeu061917.1 Olea europaea HOM05D003886 ORTHO05D004587 1.0e-65 254.2 237 58.6
Gohir.A10G000800 Gossypium hirsutum HOM05D003886 ORTHO05D004587 1.4e-65 253.8 238 59.2
Phvul.004G065600 Phaseolus vulgaris HOM05D003886 ORTHO05D004587 1.4e-65 253.8 236 59.7
Duzib192G0492 Durio zibethinus HOM05D003886 ORTHO05D004587 2.3e-65 253.1 238 58.8
HanXRQChr17g0545561 Helianthus annuus HOM05D003886 ORTHO05D004587 2.3e-65 253.1 234 60.3
Aa31LG4G1970 Aethionema arabicum HOM05D003886 ORTHO05D004587 3.0e-65 252.7 236 60.6
Glyma.19G049500 Glycine max HOM05D003886 ORTHO05D004587 4.0e-65 252.3 238 59.2
Potri.014G000600 Populus trichocarpa HOM05D003886 ORTHO05D004587 4.0e-65 252.3 238 60.5
CANSAT01G1565 Cannabis sativa HOM05D003886 ORTHO05D004587 6.7e-65 251.5 238 57.1
Manes.15G112100 Manihot esculenta HOM05D003886 ORTHO05D004587 8.8e-65 251.1 237 59.5
Sabra14G0003200 Salix brachista HOM05D003886 ORTHO05D004587 8.8e-65 251.1 238 60.5
TAR624G0406 Trochodendron aralioides HOM05D003886 ORTHO05D004587 1.2e-64 250.8 235 59.1
THA.LOC104808112 Tarenaya hassleriana HOM05D003886 ORTHO05D004587 2.0e-64 250.0 236 58.9
BolC6t40307H Brassica oleracea HOM05D003886 ORTHO05D004587 3.3e-64 249.2 237 58.2
BcaC08g47466 Brassica carinata HOM05D003886 ORTHO05D004587 7.5e-64 248.1 237 57.8
AUR62011474 Chenopodium quinoa HOM05D003886 ORTHO05D004587 7.5e-64 248.1 242 57.9
AUR62016582 Chenopodium quinoa HOM05D003886 ORTHO05D004587 9.7e-64 247.7 238 58.4
Sp5g34070 Schrenkiella parvula HOM05D003886 ORTHO05D004587 9.7e-64 247.7 235 58.3
EL10Ac9g21865 Beta vulgaris HOM05D003886 ORTHO05D004587 1.3e-63 247.3 238 58.8
CsaV3_1G038140 Cucumis sativus L. HOM05D003886 ORTHO05D004587 1.3e-63 247.3 238 57.6
Glyma.13G045600 Glycine max HOM05D003886 ORTHO05D004587 1.7e-63 246.9 237 58.2
MSTRG.5179 Avicennia marina HOM05D003886 ORTHO05D004587 2.8e-63 246.1 226 63.3
Lsat_1_v5_gn_3_52161 Lactuca sativa HOM05D003886 ORTHO05D004587 2.8e-63 246.1 237 59.1
AL2G39480 Arabidopsis lyrata HOM05D003886 ORTHO05D004587 4.8e-63 245.4 231 58.0
C06p52890 Brassica napus HOM05D003886 ORTHO05D004587 8.2e-63 244.6 237 57.4
Manes.03G095300 Manihot esculenta HOM05D003886 ORTHO05D004587 8.2e-63 244.6 239 60.3
PGR102G2920 Punica granatum HOM05D003886 ORTHO05D004587 8.2e-63 244.6 245 57.6
Thhalv10018536m.g Eutrema salsugineum HOM05D003886 ORTHO05D004587 1.1e-62 244.2 236 58.5
Carub.0002s2589 Capsella rubella HOM05D003886 ORTHO05D004587 1.4e-62 243.8 235 58.3
Lalb_Chr21g0317801 Lupinus albus HOM05D003886 ORTHO05D004587 1.8e-62 243.4 238 57.6
A07p44160 Brassica napus HOM05D003886 ORTHO05D004587 2.4e-62 243.0 237 57.0
MELO3C015232.2 Cucumis melo HOM05D003886 ORTHO05D004587 2.4e-62 243.0 238 56.7
BcaB02g07192 Brassica carinata HOM05D003886 ORTHO05D004587 3.1e-62 242.7 236 58.5
BraA07t31924Z Brassica rapa HOM05D003886 ORTHO05D004587 3.1e-62 242.7 237 57.0
BcaC08g45391 Brassica carinata HOM05D003886 ORTHO05D004587 4.1e-62 242.3 236 57.2
C06p30220 Brassica napus HOM05D003886 ORTHO05D004587 4.1e-62 242.3 236 57.2
BolC6t38185H Brassica oleracea HOM05D003886 ORTHO05D004587 4.1e-62 242.3 236 57.2
Ah.01g020350 Amaranthus hybridus HOM05D003886 ORTHO05D004587 5.3e-62 241.9 238 56.3
Medtr8g090035 Medicago truncatula HOM05D003886 ORTHO05D004587 7.0e-62 241.5 237 58.2
TAR626G1553 Trochodendron aralioides HOM05D003886 ORTHO05D004587 9.1e-62 241.1 236 57.6
AT1G79020 Arabidopsis thaliana HOM05D003886 ORTHO05D004587 5.9e-61 238.4 237 58.2
BraA07t30377Z Brassica rapa HOM05D003886 ORTHO05D004587 5.9e-61 238.4 236 56.8
AL1G28850 Arabidopsis lyrata HOM05D003886 ORTHO05D004587 1.0e-60 237.7 232 60.3
Thhalv10007658m.g Eutrema salsugineum HOM05D003886 ORTHO05D004587 1.0e-60 237.7 232 59.9
Sp1g14830 Schrenkiella parvula HOM05D003886 ORTHO05D004587 1.7e-60 236.9 232 57.8
Sed0016198 Sechium edule HOM05D003886 ORTHO05D004587 5.0e-60 235.3 233 57.1
AT1G16690 Arabidopsis thaliana HOM05D003886 ORTHO05D004587 6.5e-60 235.0 232 59.5
Psat7g057280 Pisum sativum HOM05D003886 ORTHO05D004587 6.5e-60 235.0 238 57.1
Carub.0001s1642 Capsella rubella HOM05D003886 ORTHO05D004587 3.2e-59 232.6 232 59.1
Lalb_Chr04g0257491 Lupinus albus HOM05D003886 ORTHO05D004587 9.4e-59 231.1 237 54.0
COL.COLO4_26802 Corchorus olitorius HOM05D003886 ORTHO05D004587 1.2e-58 230.7 226 57.1
PSO782G4625 Papaver somniferum HOM05D003886 ORTHO05D004587 1.2e-58 230.7 238 56.7
PSO063G1610 Papaver somniferum HOM05D003886 ORTHO05D004587 1.6e-58 230.3 238 56.3
Sc24g0001760 Simmondsia chinensis HOM05D003886 ORTHO05D004587 2.1e-58 229.9 235 55.3
BraA02t07251Z Brassica rapa HOM05D003886 ORTHO05D004587 2.7e-58 229.6 235 56.6
A02p22460 Brassica napus HOM05D003886 ORTHO05D004587 3.6e-58 229.2 235 56.2
A07p27360 Brassica napus HOM05D003886 ORTHO05D004587 1.8e-57 226.9 234 55.6
BolC2t09627H Brassica oleracea HOM05D003886 ORTHO05D004587 2.3e-57 226.5 235 55.7
Lalb_Chr06g0174541 Lupinus albus HOM05D003886 ORTHO05D004587 2.3e-57 226.5 240 55.0
BcaC03g15859 Brassica carinata HOM05D003886 ORTHO05D004587 1.5e-56 223.8 235 55.7
C02p36140 Brassica napus HOM05D003886 ORTHO05D004587 3.4e-56 222.6 235 55.3
CARHR017150 Cardamine hirsuta HOM05D003886 ORTHO05D004587 4.4e-56 222.2 233 56.7
ClCG03G018020 Citrullus lanatus HOM05D003886 ORTHO05D004587 7.5e-56 221.5 273 49.5
Zm00001eb308950 Zea mays HOM05D003886 ORTHO05D004587 2.2e-55 219.9 237 53.2
Nitab4.5_0000389g0110 Nicotiana tabacum HOM05D003886 ORTHO05D004587 3.7e-55 219.2 151 72.8
HPP92_015734 Vanilla planifolia HOM05D003886 ORTHO05D004587 8.3e-55 218.0 236 52.5
arahy.Tifrunner.gnm1.ann1.Z0Z3SY Arachis hypogaea HOM05D003886 ORTHO05D004587 1.6e-53 213.8 271 46.5
Os08g0338900 Oryza sativa ssp. japonica HOM05D003886 ORTHO05D004587 4.5e-53 212.2 241 49.8
ATR0626G209 Amborella trichopoda HOM05D003886 ORTHO05D004587 3.8e-52 209.1 227 53.7
TPR.G6290 Trifolium pratense HOM05D003886 ORTHO05D004587 3.8e-52 209.1 218 57.3
CDE02G1355 Ceratophyllum demersum HOM05D003886 ORTHO05D004587 3.0e-49 199.5 227 49.8
SHI31130 Sapria himalayana HOM05D003886 ORTHO05D004587 3.0e-49 199.5 226 54.0
CDE03G0037 Ceratophyllum demersum HOM05D003886 ORTHO05D004587 2.0e-48 196.8 234 49.6
ATR0751G140 Amborella trichopoda HOM05D003886 ORTHO05D004587 7.5e-48 194.9 243 50.2
CDE06G2124 Ceratophyllum demersum HOM05D003886 ORTHO05D004587 2.4e-46 189.9 234 47.4
Aqoxy6G00358 Aquilegia oxysepala HOM05D003886 ORTHO05D004587 7.3e-43 178.3 239 47.3
Cpa.g.sc10.19 Carica papaya HOM05D003886 ORTHO05D004587 8.0e-42 174.9 186 54.3
Nn8g38501 Nelumbo nucifera HOM05D003886 ORTHO05D004587 8.0e-42 174.9 155 60.0
Mapoly0014s0003 Marchantia polymorpha HOM05D003886 ORTHO05D004587 6.8e-41 171.8 260 41.2
Zm00001eb097400 Zea mays HOM05D003886 ORTHO05D004587 6.8e-41 171.8 206 47.6
AagrBONN_evm.TU.Sc2ySwM_228.1694 Anthoceros agrestis HOM05D003886 ORTHO05D004587 1.1e-38 164.5 253 43.1
SMO367G1242 Selaginella moellendorffii HOM05D003886 ORTHO05D004587 1.8e-38 163.7 235 42.6
Haze_16249 Corylus avellana HOM05D003886 ORTHO05D004587 2.0e-37 160.2 245 42.4
ECA246G0124 Erigeron canadensis HOM05D003886 ORTHO05D004587 4.6e-37 159.1 197 50.3
Pp3c23_7050 Physcomitrium patens HOM05D003886 ORTHO05D004587 4.0e-33 146.0 250 41.6
CDE05G0598 Ceratophyllum demersum HOM05D003886 ORTHO05D004587 2.0e-32 143.7 227 39.2
SEGI_11104 Sequoiadendron giganteum HOM05D003886 ORTHO05D004587 3.2e-30 136.3 220 42.7
HanXRQChr08g0234351 Helianthus annuus HOM05D003886 ORTHO05D004587 4.7e-26 122.5 76 82.9
arahy.Tifrunner.gnm1.ann1.78GTJP Arachis hypogaea HOM05D003886 ORTHO05D004587 6.8e-25 118.6 83 71.1
Pp3c16_8390 Physcomitrium patens HOM05D003886 ORTHO05D004587 8.9e-25 118.2 231 38.1
Ah.14g084510 Amaranthus hybridus HOM05D003886 ORTHO05D004587 1.2e-18 97.8 220 35.0
GSVIVG01024509001 Vitis vinifera HOM05D003886 ORTHO05D004587 1.2e-18 97.8 70 75.7
Nitab4.5_0000389g0130 Nicotiana tabacum HOM05D003886 ORTHO05D004587 2.0e-16 90.5 76 63.2
BcaB05g25167 Brassica carinata HOM05D003886 ORTHO05D004587 2.6e-16 90.1 56 82.1
CBR_g38268 Chara braunii HOM05D003886 ORTHO05D004587 9.9e-16 88.2 80 60.0
arahy.Tifrunner.gnm1.ann1.6KK5MR Arachis hypogaea HOM05D003886 ORTHO05D004587 4.9e-15 85.9 124 45.2
arahy.Tifrunner.gnm1.ann1.K7FQ1R Arachis hypogaea HOM05D003886 ORTHO05D019782 1.4e-14 84.3 122 44.3
ECA228G0002 Erigeron canadensis HOM05D003886 ORTHO05D004587 7.8e-13 78.6 116 44.8
arahy.Tifrunner.gnm1.ann1.RANL81 Arachis hypogaea HOM05D003886 ORTHO05D004587 6.6e-12 75.5 152 37.5
Cre03.g196400 Chlamydomonas reinhardtii HOM05D003886 ORTHO05D004587 8.7e-12 75.1 265 29.8
SHI49864 Sapria himalayana HOM05D003886 ORTHO05D004587 4.7e-10 69.3 40 82.5
arahy.Tifrunner.gnm1.ann1.F9GSXH Arachis hypogaea HOM05D003886 ORTHO05D019782 5.2e-09 65.9 112 39.3
MCO08G116 Micromonas commoda HOM05D003886 ORTHO05D004587 3.4e-08 63.2 132 35.6
Dinv30975 Davidia involucrata HOM05D000190 ORTHO05D000113 2.2e-07 60.5 109 42.2
SHI44505 Sapria himalayana HOM05D003886 ORTHO05D009901 7.1e-06 55.5 27 85.2


User provided reference genes

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