Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G158.35 Capsicum annuum HOM05D000549 ORTHO05D006202 1.2e-51 206.1 97 100.0
CAN.G1856.5 Capsicum annuum HOM05D000549 ORTHO05D006202 2.4e-18 95.5 57 82.5
Nitab4.5_0006805g0030 Nicotiana tabacum HOM05D000549 ORTHO05D006202 2.0e-17 92.4 57 80.7
Nitab4.5_0009301g0030 Nicotiana tabacum HOM05D000549 ORTHO05D006202 2.0e-17 92.4 57 80.7
PGSC0003DMG400026228 Solanum tuberosum HOM05D000549 ORTHO05D006202 2.0e-17 92.4 57 80.7
Peaxi162Scf00260g00420 Petunia axillaris HOM05D000549 ORTHO05D006202 4.5e-17 91.3 57 80.7
Peaxi162Scf00160g01532 Petunia axillaris HOM05D000549 ORTHO05D006202 5.8e-17 90.9 57 78.9
Solyc08g078130.4 Solanum lycopersicum HOM05D000549 ORTHO05D006202 5.8e-17 90.9 57 78.9
Sopen08g026620 Solanum pennellii HOM05D000549 ORTHO05D006202 5.8e-17 90.9 57 78.9
Manes.01G085900 Manihot esculenta HOM05D000549 ORTHO05D006202 3.2e-15 85.1 57 70.2
Actinidia31505 Actinidia chinensis HOM05D007047 ORTHO05D006202 9.3e-15 83.6 57 66.7
CiPaw.12G048500 Carya illinoinensis HOM05D000549 ORTHO05D006202 9.3e-15 83.6 57 66.7
QL12p009265 Quercus lobata HOM05D000549 ORTHO05D006202 1.2e-14 83.2 57 66.7
QL12p009692 Quercus lobata HOM05D000549 ORTHO05D006202 1.2e-14 83.2 57 66.7
MSTRG.950 Avicennia marina HOM05D000549 ORTHO05D006202 1.6e-14 82.8 57 68.4
Eucgr.D02114 Eucalyptus grandis HOM05D000549 ORTHO05D006202 1.6e-14 82.8 57 68.4
Oeu017039.1 Olea europaea HOM05D000549 ORTHO05D006202 1.6e-14 82.8 57 70.2
CDE06G0094 Ceratophyllum demersum HOM05D000549 ORTHO05D006202 3.5e-14 81.6 57 64.9
CDE06G1267 Ceratophyllum demersum HOM05D000549 ORTHO05D006202 3.5e-14 81.6 57 64.9
SGA_v2.0_scaffold48G18016 Striga asiatica HOM05D000549 ORTHO05D006202 3.5e-14 81.6 57 68.4
TAR375G0271 Trochodendron aralioides HOM05D000549 ORTHO05D006202 3.5e-14 81.6 57 64.9
arahy.Tifrunner.gnm1.ann1.5JEW3L Arachis hypogaea HOM05D000549 ORTHO05D006202 4.6e-14 81.3 57 66.7
Lj2C226T17 Lonicera japonica HOM05D000549 ORTHO05D006202 4.6e-14 81.3 57 66.7
Potri.001G153300 Populus trichocarpa HOM05D000549 ORTHO05D006202 6.0e-14 80.9 57 64.9
Dinv28849 Davidia involucrata HOM05D007047 ORTHO05D006202 7.9e-14 80.5 57 63.2
Dinv39189 Davidia involucrata HOM05D000549 ORTHO05D006202 7.9e-14 80.5 57 63.2
vmacro00030 Vaccinium macrocarpon HOM05D000549 ORTHO05D006202 7.9e-14 80.5 57 66.7
CSS0011014 Camellia sinensis var. sinensis HOM05D000549 ORTHO05D006202 1.0e-13 80.1 57 63.2
Aqoxy3G02723 Aquilegia oxysepala HOM05D000549 ORTHO05D006202 1.3e-13 79.7 57 63.2
CSS0022595 Camellia sinensis var. sinensis HOM05D000549 ORTHO05D006202 1.3e-13 79.7 57 63.2
Potri.003G080800 Populus trichocarpa HOM05D000549 ORTHO05D006202 1.3e-13 79.7 57 64.9
Sabra03G0052200 Salix brachista HOM05D000549 ORTHO05D006202 1.3e-13 79.7 57 64.9
Sed0002501 Sechium edule HOM05D000549 ORTHO05D006202 1.8e-13 79.3 57 70.2
ClCG10G002420 Citrullus lanatus HOM05D000549 ORTHO05D006202 2.3e-13 79.0 57 66.7
Sc01g0008180 Simmondsia chinensis HOM05D000549 ORTHO05D006202 2.3e-13 79.0 57 63.2
Nn6g33826 Nelumbo nucifera HOM05D000549 ORTHO05D006202 3.9e-13 78.2 57 61.4
Rhsim04G0179900 Rhododendron simsii HOM05D000549 ORTHO05D006202 3.9e-13 78.2 57 68.4
AUR62018877 Chenopodium quinoa HOM05D000549 ORTHO05D006202 5.1e-13 77.8 57 63.2
TWI23G0592 Tripterygium wilfordii HOM05D000549 ORTHO05D006202 5.1e-13 77.8 57 63.2
MELO3C013913.2 Cucumis melo HOM05D000549 ORTHO05D006202 6.7e-13 77.4 56 66.1
DCAR_004604 Daucus carota HOM05D000549 ORTHO05D006202 6.7e-13 77.4 57 66.7
Hma1.2p1_0821F.1_g224190 Hydrangea macrophylla HOM05D000549 ORTHO05D006202 8.7e-13 77.0 57 61.4
AUR62007136 Chenopodium quinoa HOM05D000549 ORTHO05D006202 1.1e-12 76.6 57 61.4
arahy.Tifrunner.gnm1.ann1.U9FTP0 Arachis hypogaea HOM05D000549 ORTHO05D006202 1.5e-12 76.3 51 70.6
SalBow7G1829 Salvia bowleyana HOM05D000549 ORTHO05D006202 1.5e-12 76.3 57 63.2
EL10Ac5g12312 Beta vulgaris HOM05D000549 ORTHO05D006202 1.9e-12 75.9 57 61.4
Ciclev10019636m.g Citrus clementina HOM05D000549 ORTHO05D006202 1.9e-12 75.9 57 63.2
Glyma.17G145600 Glycine max HOM05D000549 ORTHO05D006202 1.9e-12 75.9 57 66.7
MD04G1057400 Malus domestica HOM05D000549 ORTHO05D006202 1.9e-12 75.9 57 64.9
Prupe.5G061300 Prunus persica HOM05D000549 ORTHO05D006202 1.9e-12 75.9 57 64.9
Gorai.008G232200 Gossypium raimondii HOM05D000549 ORTHO05D006202 2.5e-12 75.5 57 66.7
Lj4g0005647 Lotus japonicus HOM05D000549 ORTHO05D006202 2.5e-12 75.5 57 64.9
GSVIVG01004793001 Vitis vinifera HOM05D000549 ORTHO05D006202 2.5e-12 75.5 57 63.2
ATR0057G066 Amborella trichopoda HOM05D000549 ORTHO05D006202 3.3e-12 75.1 57 61.4
CsaV3_3G002440 Cucumis sativus L. HOM05D000549 ORTHO05D006202 3.3e-12 75.1 57 66.7
Glyma.05G063900 Glycine max HOM05D000549 ORTHO05D006202 3.3e-12 75.1 57 66.7
Ca_21986_v3 Cicer arietinum L. HOM05D000549 ORTHO05D006202 4.3e-12 74.7 57 63.2
Ca_21999_v3 Cicer arietinum L. HOM05D000549 ORTHO05D006202 4.3e-12 74.7 57 63.2
Cc08_g11870 Coffea canephora HOM05D000549 ORTHO05D006202 4.3e-12 74.7 57 63.2
Gohir.D12G216600 Gossypium hirsutum HOM05D000549 ORTHO05D006202 5.7e-12 74.3 57 64.9
Gohir.A12G214000 Gossypium hirsutum HOM05D000549 ORTHO05D006202 7.4e-12 73.9 57 63.2
Psat4g074240 Pisum sativum HOM05D000549 ORTHO05D006202 7.4e-12 73.9 57 63.2
PSO782G4788 Papaver somniferum HOM05D000549 ORTHO05D006202 9.7e-12 73.6 57 61.4
PGR031G1501 Punica granatum HOM05D000549 ORTHO05D006202 9.7e-12 73.6 57 63.2
RcHm_v2.0_Chr7g0204691 Rosa chinensis HOM05D000549 ORTHO05D006202 9.7e-12 73.6 57 61.4
Atru.chr9.1244 Acer truncatum HOM05D000549 ORTHO05D006202 1.3e-11 73.2 57 59.6
CANSAT21G0274 Cannabis sativa HOM05D000549 ORTHO05D006202 1.3e-11 73.2 57 63.2
COL.COLO4_10023 Corchorus olitorius HOM05D000549 ORTHO05D006202 1.3e-11 73.2 58 60.3
Sabra01G0123100 Salix brachista HOM05D000549 ORTHO05D006202 1.3e-11 73.2 57 57.9
Thecc.03G244600 Theobroma cacao HOM05D000549 ORTHO05D006202 1.3e-11 73.2 57 59.6
PSO063G6040 Papaver somniferum HOM05D000549 ORTHO05D006202 2.2e-11 72.4 57 61.4
unitig_32.g11172 Utricularia gibba HOM05D000549 ORTHO05D006202 2.2e-11 72.4 57 59.6
Zm00001eb249250 Zea mays HOM05D000549 ORTHO05D006202 2.2e-11 72.4 57 57.9
HanXRQChr03g0089881 Helianthus annuus HOM05D000549 ORTHO05D006202 2.8e-11 72.0 57 57.9
Phvul.003G223810 Phaseolus vulgaris HOM05D000549 ORTHO05D006202 2.8e-11 72.0 57 63.2
Hund14509 Selenicereus undatus HOM05D000549 ORTHO05D006202 2.8e-11 72.0 57 63.2
TPR.G10468 Trifolium pratense HOM05D000549 ORTHO05D006202 2.8e-11 72.0 57 59.6
Lsat_1_v5_gn_6_93941 Lactuca sativa HOM05D000549 ORTHO05D006202 3.7e-11 71.6 57 59.6
Psat0s5275g0040 Pisum sativum HOM05D000549 ORTHO05D006202 3.7e-11 71.6 62 51.6
Duzib205G0373 Durio zibethinus HOM05D000549 ORTHO05D006202 6.3e-11 70.9 57 59.6
Lalb_Chr05g0221011 Lupinus albus HOM05D000549 ORTHO05D006202 6.3e-11 70.9 57 59.6
Ah.12g054460 Amaranthus hybridus HOM05D000549 ORTHO05D006202 8.2e-11 70.5 57 57.9
Medtr4g100350 Medicago truncatula HOM05D000549 ORTHO05D006202 8.2e-11 70.5 57 59.6
THA.LOC104807916 Tarenaya hassleriana HOM05D000549 ORTHO05D006202 8.2e-11 70.5 57 59.6
ECA240G4209 Erigeron canadensis HOM05D000549 ORTHO05D006202 1.1e-10 70.1 57 56.1
BcaB04g18396 Brassica carinata HOM05D007047 ORTHO05D006202 1.8e-10 69.3 57 59.6
FvH4_5g19890 Fragaria vesca HOM05D000549 ORTHO05D006202 1.8e-10 69.3 57 54.4
Migut.C00200 Erythranthe guttata HOM05D000549 ORTHO05D006202 2.4e-10 68.9 57 61.4
Os02g0654100 Oryza sativa ssp. japonica HOM05D000549 ORTHO05D006202 2.4e-10 68.9 57 56.1
HPP92_002098 Vanilla planifolia HOM05D000549 ORTHO05D006202 2.4e-10 68.9 57 54.4
AL7G37850 Arabidopsis lyrata HOM05D000549 ORTHO05D006202 3.1e-10 68.6 57 59.6
A08p12720 Brassica napus HOM05D007047 ORTHO05D006202 5.3e-10 67.8 57 57.9
VMungo0251G2614 Vigna mungo HOM05D003706 ORTHO05D006202 5.3e-10 67.8 57 61.4
AT4G16800 Arabidopsis thaliana HOM05D000549 ORTHO05D006202 6.9e-10 67.4 57 59.6
BcaC07g38022 Brassica carinata HOM05D000549 ORTHO05D006202 6.9e-10 67.4 57 57.9
FAN08G1945 Fragaria x ananassa HOM05D000549 ORTHO05D006202 6.9e-10 67.4 57 54.4
Sp7g17310 Schrenkiella parvula HOM05D000549 ORTHO05D006202 1.2e-09 66.6 57 57.9
Aa31LG2G12980 Aethionema arabicum HOM05D000549 ORTHO05D006202 1.5e-09 66.2 57 57.9
Carub.0007s2456 Capsella rubella HOM05D000549 ORTHO05D006202 5.9e-09 64.3 57 56.1
arahy.Tifrunner.gnm1.ann1.T0QXQZ Arachis hypogaea HOM05D000549 ORTHO05D006202 7.6e-09 63.9 57 52.6
arahy.Tifrunner.gnm1.ann1.V8INB7 Arachis hypogaea HOM05D000549 ORTHO05D006202 7.6e-09 63.9 57 52.6
CAN.G1139.4 Capsicum annuum HOM05D000402 ORTHO05D011077 1.7e-08 62.8 36 72.2
Haze_07961 Corylus avellana HOM05D000549 ORTHO05D006202 2.5e-07 58.9 48 56.2
CAN.G140.20 Capsicum annuum HOM05D003574 ORTHO05D115436 3.2e-07 58.5 41 56.1
Actinidia10849 Actinidia chinensis HOM05D000549 ORTHO05D006202 7.2e-07 57.4 38 68.4
arahy.Tifrunner.gnm1.ann1.QAQ0BW Arachis hypogaea HOM05D000563 ORTHO05D000536 7.2e-07 57.4 56 46.4
MD02G1254000 Malus domestica HOM05D037583 ORTHO05D003348 1.6e-06 56.2 54 53.7
Pp3c16_17130 Physcomitrium patens HOM05D000549 ORTHO05D006202 6.1e-06 54.3 57 49.1


User provided reference genes

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