Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1577.7 Capsicum annuum HOM05D004930 ORTHO05D006531 6.9e-173 610.5 305 100.0
PGSC0003DMG400023754 Solanum tuberosum HOM05D004930 ORTHO05D006531 1.2e-164 583.2 306 95.1
Sopen01g046750 Solanum pennellii HOM05D004930 ORTHO05D006531 5.5e-162 574.3 306 93.8
Solyc01g104310.3 Solanum lycopersicum HOM05D004930 ORTHO05D006531 2.7e-161 572.0 306 93.1
Nitab4.5_0011195g0040 Nicotiana tabacum HOM05D004930 ORTHO05D006531 5.1e-152 541.2 316 86.4
CSS0021494 Camellia sinensis var. sinensis HOM05D004930 ORTHO05D006531 5.5e-146 521.2 303 84.8
SalBow6G0918 Salvia bowleyana HOM05D004930 ORTHO05D006531 2.4e-141 505.8 292 83.9
SalBow6G1869 Salvia bowleyana HOM05D004930 ORTHO05D006531 2.4e-141 505.8 292 83.9
TAR376G0678 Trochodendron aralioides HOM05D004930 ORTHO05D006531 4.1e-141 505.0 296 84.8
TAR628G0980 Trochodendron aralioides HOM05D004930 ORTHO05D006531 2.6e-140 502.3 296 84.5
Cc02_g22360 Coffea canephora HOM05D004930 ORTHO05D006531 1.2e-137 493.4 302 81.8
TPR.G2103 Trifolium pratense HOM05D004930 ORTHO05D006531 3.0e-136 488.8 302 78.8
arahy.Tifrunner.gnm1.ann1.PLNC5S Arachis hypogaea HOM05D004930 ORTHO05D006531 4.0e-136 488.4 298 79.9
FvH4_5g29680 Fragaria vesca HOM05D004930 ORTHO05D006531 4.0e-136 488.4 288 82.3
FAN13G1313 Fragaria x ananassa HOM05D004930 ORTHO05D006531 5.2e-136 488.0 288 82.3
CiPaw.06G148500 Carya illinoinensis HOM05D004930 ORTHO05D006531 1.2e-135 486.9 300 80.0
Lj6g0009653 Lotus japonicus HOM05D004930 ORTHO05D006531 1.2e-135 486.9 308 78.6
SGA_v2.0_scaffold145G36067 Striga asiatica HOM05D004930 ORTHO05D006531 2.0e-135 486.1 296 80.4
RcHm_v2.0_Chr7g0223001 Rosa chinensis HOM05D004930 ORTHO05D006531 3.3e-135 485.3 285 82.8
DCAR_001819 Daucus carota HOM05D004930 ORTHO05D006531 4.4e-135 485.0 291 81.4
Glyma.15G047800 Glycine max HOM05D004930 ORTHO05D006531 5.7e-135 484.6 300 79.7
Medtr2g007650 Medicago truncatula HOM05D004930 ORTHO05D006531 5.7e-135 484.6 304 78.0
arahy.Tifrunner.gnm1.ann1.3M9FW6 Arachis hypogaea HOM05D004930 ORTHO05D006531 9.7e-135 483.8 291 80.1
Potri.001G209500 Populus trichocarpa HOM05D004930 ORTHO05D006531 1.3e-134 483.4 278 83.8
Potri.003G020800 Populus trichocarpa HOM05D004930 ORTHO05D006531 1.3e-134 483.4 292 80.8
MD15G1421100 Malus domestica HOM05D004930 ORTHO05D006531 1.7e-134 483.0 295 81.0
Ca_00086_v3 Cicer arietinum L. HOM05D004930 ORTHO05D006531 1.1e-133 480.3 293 79.2
FAN04G2298 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.8e-133 479.6 300 79.0
FAN18G2930 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.8e-133 479.6 300 79.0
Glyma.08G184900 Glycine max HOM05D004930 ORTHO05D006531 1.8e-133 479.6 300 79.3
Rhsim05G0119100 Rhododendron simsii HOM05D004930 ORTHO05D006531 1.8e-133 479.6 272 86.0
Thecc.02G040000 Theobroma cacao HOM05D004930 ORTHO05D006531 4.1e-133 478.4 278 84.2
VMungo0540G0757 Vigna mungo HOM05D004930 ORTHO05D006531 4.1e-133 478.4 287 80.8
Psat1g224280 Pisum sativum HOM05D004930 ORTHO05D006531 5.3e-133 478.0 290 79.0
CANSAT11G0917 Cannabis sativa HOM05D004930 ORTHO05D006531 7.0e-133 477.6 293 78.2
Cfa005536 Carpinus fangiana HOM05D004930 ORTHO05D006531 9.1e-133 477.2 285 81.1
Phvul.006G213000 Phaseolus vulgaris HOM05D004930 ORTHO05D006531 1.2e-132 476.9 287 80.5
TWI59G0754 Tripterygium wilfordii HOM05D004930 ORTHO05D006531 1.2e-132 476.9 279 82.1
ClCG05G009760 Citrullus lanatus HOM05D004930 ORTHO05D006531 1.6e-132 476.5 286 80.1
MELO3C019485.2 Cucumis melo HOM05D004930 ORTHO05D006531 2.7e-132 475.7 278 82.0
CsaV3_3G018910 Cucumis sativus L. HOM05D004930 ORTHO05D006531 4.5e-132 474.9 278 82.0
Eucgr.G00613 Eucalyptus grandis HOM05D004930 ORTHO05D006531 7.7e-132 474.2 286 81.1
Actinidia39050 Actinidia chinensis HOM05D004930 ORTHO05D006531 1.0e-131 473.8 286 79.4
HanXRQChr11g0333531 Helianthus annuus HOM05D004930 ORTHO05D006531 1.7e-131 473.0 277 83.8
Duzib248G0906 Durio zibethinus HOM05D004930 ORTHO05D006531 2.2e-131 472.6 279 81.7
Gohir.A01G001000 Gossypium hirsutum HOM05D004930 ORTHO05D006531 2.2e-131 472.6 284 79.9
Gohir.D01G000700 Gossypium hirsutum HOM05D004930 ORTHO05D006531 2.2e-131 472.6 284 79.9
Gorai.002G001200 Gossypium raimondii HOM05D004930 ORTHO05D006531 2.2e-131 472.6 284 79.9
Nn1g08650 Nelumbo nucifera HOM05D004930 ORTHO05D006531 2.2e-131 472.6 297 77.4
COL.COLO4_17882 Corchorus olitorius HOM05D004930 ORTHO05D006531 2.9e-131 472.2 282 81.9
GSVIVG01022999001 Vitis vinifera HOM05D004930 ORTHO05D006531 3.8e-131 471.9 263 87.1
Lsat_1_v5_gn_7_77761 Lactuca sativa HOM05D004930 ORTHO05D006531 5.0e-131 471.5 307 78.8
Nitab4.5_0002245g0180 Nicotiana tabacum HOM05D004930 ORTHO05D006531 5.0e-131 471.5 300 81.0
Cpa.g.sc2.5 Carica papaya HOM05D004930 ORTHO05D006531 4.2e-130 468.4 282 79.8
Peaxi162Scf00011g00243 Petunia axillaris HOM05D004930 ORTHO05D006531 7.2e-130 467.6 305 77.4
Atru.chr6.830 Acer truncatum HOM05D004930 ORTHO05D006531 9.4e-130 467.2 299 77.9
Ciclev10001315m.g Citrus clementina HOM05D004930 ORTHO05D006531 1.6e-129 466.5 281 79.7
PGR042G0956 Punica granatum HOM05D004930 ORTHO05D006531 2.1e-129 466.1 291 79.0
Duzib052G0674 Durio zibethinus HOM05D004930 ORTHO05D006531 4.7e-129 464.9 278 80.9
THA.LOC104810264 Tarenaya hassleriana HOM05D004930 ORTHO05D006531 1.5e-127 459.9 280 76.8
ECA236G4599 Erigeron canadensis HOM05D004930 ORTHO05D006531 4.4e-127 458.4 273 82.8
EL10Ac6g15372 Beta vulgaris HOM05D004930 ORTHO05D006531 5.7e-127 458.0 291 77.0
Lalb_Chr18g0060861 Lupinus albus HOM05D004930 ORTHO05D006531 1.7e-126 456.4 271 80.1
CDE05G0822 Ceratophyllum demersum HOM05D004930 ORTHO05D006531 2.2e-126 456.1 293 74.7
Aqoxy5G02422 Aquilegia oxysepala HOM05D004930 ORTHO05D006531 4.8e-126 454.9 268 81.3
Aa31LG6G7800 Aethionema arabicum HOM05D004930 ORTHO05D006531 2.4e-125 452.6 280 76.8
Lj5A251T70 Lonicera japonica HOM05D004930 ORTHO05D006531 1.2e-124 450.3 305 76.4
Carub.0001s3147 Capsella rubella HOM05D004930 ORTHO05D006531 1.6e-124 449.9 275 78.2
AL1G47670 Arabidopsis lyrata HOM05D004930 ORTHO05D006531 3.5e-124 448.7 275 78.2
A08p08610 Brassica napus HOM05D004930 ORTHO05D006531 5.9e-124 448.0 277 76.9
BraA08t32874Z Brassica rapa HOM05D004930 ORTHO05D006531 5.9e-124 448.0 277 76.9
AT1G33270 Arabidopsis thaliana HOM05D004930 ORTHO05D006531 7.7e-124 447.6 275 77.8
MBI03_g28294_MAGBIO Magnolia biondii HOM05D004930 ORTHO05D006531 1.7e-123 446.4 295 75.3
Hund04330 Selenicereus undatus HOM05D004930 ORTHO05D006531 1.7e-123 446.4 274 78.5
Sp1g28730 Schrenkiella parvula HOM05D004930 ORTHO05D006531 2.2e-123 446.0 278 76.6
Lalb_Chr20g0123411 Lupinus albus HOM05D004930 ORTHO05D006531 3.8e-123 445.3 272 78.3
BcaB04g17919 Brassica carinata HOM05D004930 ORTHO05D006531 5.0e-123 444.9 275 76.0
CARHR032640 Cardamine hirsuta HOM05D004930 ORTHO05D006531 5.0e-123 444.9 278 75.9
BcaC07g37556 Brassica carinata HOM05D004930 ORTHO05D006531 1.5e-122 443.4 276 75.7
ATR0684G093 Amborella trichopoda HOM05D004930 ORTHO05D006531 9.5e-122 440.7 294 75.5
Sc07g0007240 Simmondsia chinensis HOM05D004930 ORTHO05D006531 9.5e-122 440.7 286 76.6
Os11g0546300 Oryza sativa ssp. japonica HOM05D004930 ORTHO05D006531 2.7e-121 439.1 282 73.0
Zm00001eb113740 Zea mays HOM05D004930 ORTHO05D006531 8.8e-120 434.1 280 73.9
A09p32980 Brassica napus HOM05D004930 ORTHO05D006531 5.7e-119 431.4 278 74.5
BraA09t38838Z Brassica rapa HOM05D004930 ORTHO05D006531 5.7e-119 431.4 278 74.5
Sabra03G0012100 Salix brachista HOM05D004930 ORTHO05D006531 5.7e-119 431.4 421 56.5
BcaC08g43878 Brassica carinata HOM05D004930 ORTHO05D006531 9.8e-119 430.6 278 74.1
BolC6t36417H Brassica oleracea HOM05D004930 ORTHO05D006531 9.8e-119 430.6 278 74.1
Gohir.A08G000149 Gossypium hirsutum HOM05D004930 ORTHO05D006531 9.8e-119 430.6 287 70.7
Gohir.D08G010200 Gossypium hirsutum HOM05D004930 ORTHO05D006531 1.3e-118 430.3 279 72.4
Gorai.004G003500 Gossypium raimondii HOM05D004930 ORTHO05D006531 1.3e-118 430.3 279 72.4
QL02p098488 Quercus lobata HOM05D004930 ORTHO05D006531 2.2e-118 429.5 402 58.2
SEGI_13232 Sequoiadendron giganteum HOM05D004930 ORTHO05D006531 4.9e-118 428.3 275 74.2
C06p12670 Brassica napus HOM05D004930 ORTHO05D006531 1.8e-117 426.4 278 72.7
PSO170G4712 Papaver somniferum HOM05D004930 ORTHO05D006531 3.1e-117 425.6 287 73.5
BcaB07g32965 Brassica carinata HOM05D004930 ORTHO05D006531 9.2e-117 424.1 279 72.4
Ah.03g147430 Amaranthus hybridus HOM05D004930 ORTHO05D006531 4.3e-114 415.2 277 74.0
AUR62017811 Chenopodium quinoa HOM05D004930 ORTHO05D006531 4.4e-111 405.2 293 70.3
vmacro01769 Vaccinium macrocarpon HOM05D004930 ORTHO05D006531 9.2e-109 397.5 295 67.8
SMO145G0200 Selaginella moellendorffii HOM05D004930 ORTHO05D006531 1.6e-108 396.7 284 69.4
Oeu012747.1 Olea europaea HOM05D004930 ORTHO05D006531 3.0e-107 392.5 226 83.2
Sabra01G0161800 Salix brachista HOM05D004930 ORTHO05D006531 8.6e-107 391.0 331 64.4
Ca_29925_v3 Cicer arietinum L. HOM05D004930 ORTHO05D006531 2.1e-105 386.3 226 82.7
BolC8t47898H Brassica oleracea HOM05D004930 ORTHO05D006531 1.4e-104 383.6 323 60.4
Rhsim11G0130300 Rhododendron simsii HOM05D004930 ORTHO05D006531 1.4e-104 383.6 248 76.2
Dinv19356 Davidia involucrata HOM05D004930 ORTHO05D006531 1.2e-103 380.6 225 84.0
THA.LOC104813074 Tarenaya hassleriana HOM05D004930 ORTHO05D006531 2.9e-102 375.9 238 76.5
Thhalv10007991m.g Eutrema salsugineum HOM05D004930 ORTHO05D006531 8.3e-102 374.4 234 76.9
AagrBONN_evm.TU.Sc2ySwM_344.3941 Anthoceros agrestis HOM05D004930 ORTHO05D006531 1.9e-101 373.2 270 67.8
Mapoly0101s0012 Marchantia polymorpha HOM05D004930 ORTHO05D006531 1.1e-98 364.0 258 68.6
Pp3c11_20720 Physcomitrium patens HOM05D004930 ORTHO05D006531 3.1e-96 355.9 268 67.2
HanXRQChr02g0058791 Helianthus annuus HOM05D004930 ORTHO05D006531 1.8e-88 330.1 196 79.1
vmacro19901 Vaccinium macrocarpon HOM05D004930 ORTHO05D006531 5.2e-88 328.6 513 42.5
HPP92_002187 Vanilla planifolia HOM05D004930 ORTHO05D006531 3.8e-86 322.4 200 77.5
AUR62003501 Chenopodium quinoa HOM05D004930 ORTHO05D006531 6.4e-86 321.6 214 73.8
SMO139G0053 Selaginella moellendorffii HOM05D004930 ORTHO05D006531 1.7e-83 313.5 217 71.0
CSS0024235 Camellia sinensis var. sinensis HOM05D004930 ORTHO05D006531 2.3e-83 313.2 302 60.3
AagrBONN_evm.TU.Sc2ySwM_344.3947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.8e-80 303.5 265 58.1
Manes.07G014400 Manihot esculenta HOM05D004930 ORTHO05D006531 8.9e-80 301.2 174 84.5
Sed0026856 Sechium edule HOM05D004930 ORTHO05D006531 3.8e-78 295.8 172 85.5
Prupe.1G566300 Prunus persica HOM05D004930 ORTHO05D006531 4.6e-76 288.9 172 82.6
CBR_g22336 Chara braunii HOM05D004930 ORTHO05D006531 1.9e-74 283.5 232 60.8
Haze_01635 Corylus avellana HOM05D004930 ORTHO05D006531 7.6e-55 218.4 136 80.1
Cre12.g530950 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D006531 5.5e-45 185.7 254 42.1
Cre03.g195500 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D006531 4.3e-42 176.0 259 36.7
MCO11G494 Micromonas commoda HOM05D004930 ORTHO05D006531 1.7e-30 137.5 286 32.9
PRCOL_00005484 Prasinoderma coloniale HOM05D007321 ORTHO05D009244 1.1e-26 124.8 247 35.2
CARHR054090 Cardamine hirsuta HOM05D004930 ORTHO05D006531 3.5e-23 113.2 88 67.0
Migut.N01037 Erythranthe guttata HOM05D004930 ORTHO05D006531 2.9e-22 110.2 65 83.1
AUR62003500 Chenopodium quinoa HOM05D004930 ORTHO05D006531 1.6e-20 104.4 64 79.7
FAN06G5097 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.3e-17 94.7 64 71.9
FAN11G3733 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.3e-17 94.7 64 70.3
FAN25G1134 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.3e-17 94.7 64 71.9
FvH4_3g29702 Fragaria vesca HOM05D004930 ORTHO05D011275 1.7e-17 94.4 64 70.3
FvH4_3g12743 Fragaria vesca HOM05D004930 ORTHO05D006531 2.2e-17 94.0 64 71.9
Cre09.g400219 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D006531 2.4e-16 90.5 166 34.9
FAN01G0209 Fragaria x ananassa HOM05D004930 ORTHO05D006531 4.1e-16 89.7 64 65.6
FAN12G1704 Fragaria x ananassa HOM05D004930 ORTHO05D006531 4.1e-16 89.7 64 65.6
FAN17G1951 Fragaria x ananassa HOM05D004930 ORTHO05D006531 4.1e-16 89.7 64 65.6
FAN17G0369 Fragaria x ananassa HOM05D004930 ORTHO05D011275 1.2e-15 88.2 64 64.1
FAN17G1425 Fragaria x ananassa HOM05D004930 ORTHO05D006531 1.6e-15 87.8 64 64.1
FvH4_4g16550 Fragaria vesca HOM05D004930 ORTHO05D011275 2.7e-15 87.0 64 62.5
MCO09G146 Micromonas commoda HOM05D004930 ORTHO05D270306 2.9e-14 83.6 254 27.2
PRCOL_00003693 Prasinoderma coloniale HOM05D004930 ORTHO05D006531 2.9e-14 83.6 156 37.8
MCO01G237 Micromonas commoda HOM05D004930 ORTHO05D006531 6.5e-14 82.4 192 31.8
Ca_20167_v3 Cicer arietinum L. HOM05D004930 ORTHO05D000002 3.2e-13 80.1 49 81.6
Cre10.g431350 Chlamydomonas reinhardtii HOM05D039848 ORTHO05D028745 4.7e-12 76.3 168 30.4
CBR_g45217 Chara braunii HOM05D004930 ORTHO05D028745 5.2e-11 72.8 170 30.0
Cre26.g756847 Chlamydomonas reinhardtii HOM05D004930 ORTHO05D028745 2.8e-09 67.0 185 33.0


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