Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1576.4 Capsicum annuum HOM05D002965 ORTHO05D010183 2.7e-152 542.0 278 100.0
CAN.G1439.3 Capsicum annuum HOM05D002965 ORTHO05D010183 3.1e-111 405.6 328 71.0
CAN.G309.4 Capsicum annuum HOM05D002965 ORTHO05D010183 9.1e-39 164.9 100 88.0
Hma1.2p1_1338F.1_g276549 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 1.3e-37 161.0 100 87.0
Hma1.2p1_1338F.1_g276560 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 1.3e-37 161.0 100 87.0
Sp3g25630 Schrenkiella parvula HOM05D002965 ORTHO05D010183 3.8e-37 159.5 101 84.2
SalBow1G8555 Salvia bowleyana HOM05D002965 ORTHO05D010183 2.5e-36 156.8 97 85.6
HanXRQChr08g0212281 Helianthus annuus HOM05D002965 ORTHO05D010183 4.2e-36 156.0 91 89.0
HanXRQMTg0579441 Helianthus annuus HOM05D002965 ORTHO05D010183 4.2e-36 156.0 91 89.0
Actinidia10888 Actinidia chinensis HOM05D002965 ORTHO05D010183 4.7e-35 152.5 92 87.0
Cpa.g.sc263.23 Carica papaya HOM05D002965 ORTHO05D010183 1.0e-34 151.4 101 82.2
Dinv06704 Davidia involucrata HOM05D002965 ORTHO05D010183 8.8e-34 148.3 92 87.0
Lsat_1_v5_gn_4_66041 Lactuca sativa HOM05D002965 ORTHO05D010183 1.2e-33 147.9 91 85.7
Sopen05g012840 Solanum pennellii HOM05D002965 ORTHO05D010183 1.2e-33 147.9 104 78.8
QL05p039661 Quercus lobata HOM05D002965 ORTHO05D010183 2.6e-33 146.7 92 83.7
Medtr0082s0280 Medicago truncatula HOM05D002965 ORTHO05D010183 4.4e-33 146.0 92 84.8
Nitab4.5_0005831g0070 Nicotiana tabacum HOM05D002965 ORTHO05D010183 4.4e-33 146.0 103 78.6
TPR.G40481 Trifolium pratense HOM05D002965 ORTHO05D010183 4.4e-33 146.0 93 83.9
CsaV3_UNG209220 Cucumis sativus L. HOM05D002965 ORTHO05D010183 5.7e-33 145.6 96 81.2
Potri.007G061981 Populus trichocarpa HOM05D002965 ORTHO05D010183 1.7e-32 144.1 95 81.1
Psat3g040160 Pisum sativum HOM05D004537 ORTHO05D005492 2.2e-32 143.7 89 86.5
arahy.Tifrunner.gnm1.ann1.CG3D8R Arachis hypogaea HOM05D002965 ORTHO05D010183 2.8e-32 143.3 92 83.7
arahy.Tifrunner.gnm1.ann1.EP7E6M Arachis hypogaea HOM05D002965 ORTHO05D010183 2.8e-32 143.3 92 83.7
arahy.Tifrunner.gnm1.ann1.I1QAK6 Arachis hypogaea HOM05D002965 ORTHO05D010183 2.8e-32 143.3 92 83.7
LjContig00315g0010995 Lotus japonicus HOM05D002965 ORTHO05D010183 2.8e-32 143.3 89 85.4
Ah.10g028480 Amaranthus hybridus HOM05D002965 ORTHO05D010183 6.3e-32 142.1 91 82.4
Nitab4.5_0005613g0040 Nicotiana tabacum HOM05D002965 ORTHO05D010183 1.1e-31 141.4 88 84.1
Aqoxy1G02687 Aquilegia oxysepala HOM05D002965 ORTHO05D010183 1.4e-31 141.0 91 84.6
Ca_28103_v3 Cicer arietinum L. HOM05D003430 ORTHO05D004809 3.1e-31 139.8 127 63.0
Sed0028066 Sechium edule HOM05D002965 ORTHO05D010183 3.1e-31 139.8 90 82.2
unitig_87.g27935 Utricularia gibba HOM05D002965 ORTHO05D010183 3.1e-31 139.8 147 57.1
Medtr5g040110 Medicago truncatula HOM05D002965 ORTHO05D010183 5.4e-31 139.0 83 89.2
Hma1.2p1_0204F.1_g086870 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 2.0e-30 137.1 92 79.3
RcHm_v2.0_MTg0499241 Rosa chinensis HOM05D002965 ORTHO05D010183 2.0e-30 137.1 83 88.0
SHI48910 Sapria himalayana HOM05D002965 ORTHO05D010183 1.0e-29 134.8 78 89.7
MELO3C031425.2 Cucumis melo HOM05D002965 ORTHO05D010183 2.5e-28 130.2 96 70.8
Hma1.2p1_0713F.1_g207720 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 9.5e-28 128.3 97 76.3
SGA_v2.0_scaffold479G52282 Striga asiatica HOM05D002965 ORTHO05D010183 1.2e-27 127.9 74 87.8
BNapus_Darmor_BZH_scaffold_234p00020 Brassica napus HOM05D002965 ORTHO05D010183 4.0e-26 122.9 78 84.6
BolSC28t60382H Brassica oleracea HOM05D002965 ORTHO05D010183 4.0e-26 122.9 78 84.6
BolSC28t60415H Brassica oleracea HOM05D002965 ORTHO05D010183 4.0e-26 122.9 78 84.6
BraSC177t45752Z Brassica rapa HOM05D002965 ORTHO05D010183 4.0e-26 122.9 78 84.6
Nitab4.5_0000172g1470 Nicotiana tabacum HOM05D002965 ORTHO05D010183 7.5e-25 118.6 88 75.0
Peaxi162Scf00197g00037 Petunia axillaris HOM05D002965 ORTHO05D010183 2.2e-24 117.1 91 72.5
RhsimMtG0001000 Rhododendron simsii HOM05D000743 ORTHO05D000580 1.1e-23 114.8 70 87.1
CAN.G285.11 Capsicum annuum HOM05D002965 ORTHO05D010183 5.4e-23 112.5 64 92.2
CDE02G3239 Ceratophyllum demersum HOM05D002965 ORTHO05D010183 5.4e-23 112.5 67 86.6
Solyc00g118690.1 Solanum lycopersicum HOM05D002965 ORTHO05D010183 1.3e-21 107.8 78 78.2
CAN.G1061.19 Capsicum annuum HOM05D002965 ORTHO05D010183 1.1e-20 104.8 60 91.7
CAN.G390.19 Capsicum annuum HOM05D002965 ORTHO05D010183 1.1e-20 104.8 71 80.3
Nitab4.5_0002558g0140 Nicotiana tabacum HOM05D002965 ORTHO05D010183 1.5e-20 104.4 92 66.3
BraSC48t46251Z Brassica rapa HOM05D002965 ORTHO05D010183 1.9e-20 104.0 68 83.8
ECA039G0012 Erigeron canadensis HOM05D002965 ORTHO05D010183 5.6e-20 102.4 139 51.8
ATMG01120 Arabidopsis thaliana HOM05D002965 ORTHO05D010183 1.6e-19 100.9 73 72.6
VMungo0647G1384 Vigna mungo HOM05D002965 ORTHO05D010183 2.1e-19 100.5 63 84.1
Lalb_Chr00c21g0405781 Lupinus albus HOM05D002965 ORTHO05D010183 2.8e-19 100.1 56 91.1
Nitab4.5_0001796g0410 Nicotiana tabacum HOM05D002965 ORTHO05D010183 1.0e-18 98.2 58 86.2
SabraMtG0001800 Salix brachista HOM05D001325 ORTHO05D001540 1.2e-17 94.7 85 61.2
Hma1.2p1_0000F.1_g000060 Hydrangea macrophylla HOM05D002965 ORTHO05D010183 7.5e-17 92.0 59 79.7
Cfa022987 Carpinus fangiana HOM05D002965 ORTHO05D010183 1.3e-16 91.3 53 88.7
Nitab4.5_0001761g0080 Nicotiana tabacum HOM05D002965 ORTHO05D010183 8.3e-16 88.6 55 83.6
Psat6g191080 Pisum sativum HOM05D002965 ORTHO05D010183 6.0e-14 82.4 57 73.7
Mapoly0013s0013 Marchantia polymorpha HOM05D002965 ORTHO05D010183 2.3e-13 80.5 59 67.8
CSS0026545 Camellia sinensis var. sinensis HOM05D002965 ORTHO05D010183 1.1e-12 78.2 63 68.3
Nitab4.5_0001152g0280 Nicotiana tabacum HOM05D008204 ORTHO05D016167 2.5e-12 77.0 72 62.5
Nitab4.5_0000416g0020 Nicotiana tabacum HOM05D000452 ORTHO05D000647 1.2e-11 74.7 63 66.7
Sopen05g007970 Solanum pennellii HOM05D002965 ORTHO05D010183 2.1e-11 73.9 45 82.2
Nitab4.5_0000172g1750 Nicotiana tabacum HOM05D008204 ORTHO05D016167 4.7e-11 72.8 68 63.2
SMO053G0011 Selaginella moellendorffii HOM05D002965 ORTHO05D010183 1.1e-10 71.6 61 59.0
Solyc10g018950.1 Solanum lycopersicum HOM05D002965 ORTHO05D010183 1.5e-09 67.8 49 69.4
Nitab4.5_0010333g0030 Nicotiana tabacum HOM05D008204 ORTHO05D010378 3.4e-09 66.6 63 61.9
CDE02G2102 Ceratophyllum demersum HOM05D002965 ORTHO05D010183 7.5e-09 65.5 39 82.1
Nitab4.5_0012599g0060 Nicotiana tabacum HOM05D008204 ORTHO05D010378 1.3e-08 64.7 77 51.9
Dinv34203 Davidia involucrata HOM05D002965 ORTHO05D010183 1.7e-08 64.3 40 82.5
BolC7t41501H Brassica oleracea HOM05D002965 ORTHO05D010183 2.9e-08 63.5 36 86.1
SHI41349 Sapria himalayana HOM05D037518 ORTHO05D010183 1.2e-06 58.2 36 80.6
QL02p008127 Quercus lobata HOM05D003783 ORTHO05D004568 2.1e-06 57.4 56 57.1


User provided reference genes

Program Settings