Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1572.8 Capsicum annuum HOM05D003570 ORTHO05D004207 0.0e+00 1098.2 639 100.0
Sopen05g008710 Solanum pennellii HOM05D003570 ORTHO05D004207 7.9e-280 966.8 645 87.9
Nitab4.5_0002373g0110 Nicotiana tabacum HOM05D003570 ORTHO05D004207 6.5e-258 894.0 645 78.1
Peaxi162Scf00128g00550 Petunia axillaris HOM05D003570 ORTHO05D004207 8.6e-250 867.1 640 79.4
Nitab4.5_0004117g0010 Nicotiana tabacum HOM05D003570 ORTHO05D004207 5.2e-231 804.7 651 71.7
Nitab4.5_0001978g0070 Nicotiana tabacum HOM05D003570 ORTHO05D004207 7.8e-227 790.8 700 70.4
Actinidia37450 Actinidia chinensis HOM05D003570 ORTHO05D004207 3.7e-168 595.9 649 56.7
Oeu038645.2 Olea europaea HOM05D003570 ORTHO05D004207 8.5e-157 558.1 677 56.6
TAR622G0746 Trochodendron aralioides HOM05D003570 ORTHO05D004207 4.2e-156 555.8 659 56.4
HanXRQChr08g0208421 Helianthus annuus HOM05D003570 ORTHO05D004207 4.0e-154 549.3 653 53.4
Haze_12279 Corylus avellana HOM05D003570 ORTHO05D004207 2.2e-152 543.5 652 54.8
MSTRG.553 Avicennia marina HOM05D003570 ORTHO05D004207 3.7e-152 542.7 635 56.5
Lsat_1_v5_gn_0_32260 Lactuca sativa HOM05D003570 ORTHO05D004207 8.2e-152 541.6 626 55.1
Cc11_g16040 Coffea canephora HOM05D003570 ORTHO05D004207 2.4e-151 540.0 625 56.8
Nn4g22548 Nelumbo nucifera HOM05D003570 ORTHO05D004207 5.0e-149 532.3 664 49.8
Thecc.02G265200 Theobroma cacao HOM05D003570 ORTHO05D004207 1.1e-148 531.2 650 54.0
GSVIVG01000572001 Vitis vinifera HOM05D003570 ORTHO05D004207 2.5e-148 530.0 668 51.2
Duzib248G0757 Durio zibethinus HOM05D003570 ORTHO05D004207 3.2e-148 529.6 643 53.2
COL.COLO4_23499 Corchorus olitorius HOM05D003570 ORTHO05D004207 5.2e-146 522.3 646 51.9
Sc04g0009680 Simmondsia chinensis HOM05D003570 ORTHO05D004207 5.2e-146 522.3 650 49.2
Ciclev10030923m.g Citrus clementina HOM05D003570 ORTHO05D004207 2.0e-145 520.4 656 50.5
Manes.13G020900 Manihot esculenta HOM05D003570 ORTHO05D004207 3.7e-144 516.2 639 51.5
Lj6A815G40 Lonicera japonica HOM05D003570 ORTHO05D004207 2.4e-143 513.5 476 61.3
DCAR_026498 Daucus carota HOM05D003570 ORTHO05D004207 3.1e-143 513.1 652 50.9
Gohir.D04G180400 Gossypium hirsutum HOM05D003570 ORTHO05D004207 7.0e-143 511.9 646 51.4
Gorai.012G173500 Gossypium raimondii HOM05D003570 ORTHO05D004207 3.5e-142 509.6 646 51.5
Migut.K00625 Erythranthe guttata HOM05D003570 ORTHO05D004207 1.7e-141 507.3 634 53.6
Potri.008G183500 Populus trichocarpa HOM05D003570 ORTHO05D004207 6.5e-141 505.4 643 52.9
CiPaw.06G064800 Carya illinoinensis HOM05D003570 ORTHO05D004207 8.5e-141 505.0 645 54.0
Prupe.1G241900 Prunus persica HOM05D003570 ORTHO05D004207 5.5e-140 502.3 635 51.5
Gohir.A04G137200 Gossypium hirsutum HOM05D003570 ORTHO05D004207 4.0e-138 496.1 649 49.9
Eucgr.B03244 Eucalyptus grandis HOM05D003570 ORTHO05D004207 8.8e-138 495.0 646 51.7
AUR62024231 Chenopodium quinoa HOM05D003570 ORTHO05D004207 2.6e-137 493.4 657 49.2
TWI36G1196 Tripterygium wilfordii HOM05D003570 ORTHO05D004207 1.3e-136 491.1 635 51.2
MBI04_g13681_MAGBIO Magnolia biondii HOM05D003570 ORTHO05D004207 2.8e-136 490.0 644 49.7
SGA_v2.0_scaffold22G09799 Striga asiatica HOM05D003570 ORTHO05D004207 1.8e-135 487.3 630 50.0
PGR102G1250 Punica granatum HOM05D003570 ORTHO05D004207 9.2e-135 485.0 641 48.0
CANSAT11G1164 Cannabis sativa HOM05D003570 ORTHO05D004207 1.6e-134 484.2 637 46.9
RcHm_v2.0_Chr4g0432651 Rosa chinensis HOM05D003570 ORTHO05D004207 2.0e-134 483.8 627 49.6
PGSC0003DMG400016968 Solanum tuberosum HOM05D003570 ORTHO05D004207 2.0e-134 483.8 277 89.9
Cpa.g.sc13.88 Carica papaya HOM05D003570 ORTHO05D004207 1.9e-132 477.2 658 46.0
ECA233G5166 Erigeron canadensis HOM05D002671 ORTHO05D002985 1.9e-132 477.2 568 52.8
THA.LOC104805269 Tarenaya hassleriana HOM05D003570 ORTHO05D004207 1.9e-132 477.2 647 47.8
VMungo1383G2895 Vigna mungo HOM05D003570 ORTHO05D004207 3.3e-132 476.5 637 49.8
FAN12G2286 Fragaria x ananassa HOM05D003570 ORTHO05D004207 9.5e-132 474.9 632 48.4
FvH4_4g25360 Fragaria vesca HOM05D003570 ORTHO05D004207 1.0e-130 471.5 632 48.4
PSO339G2835 Papaver somniferum HOM05D003570 ORTHO05D004207 1.0e-130 471.5 639 49.6
arahy.Tifrunner.gnm1.ann1.8897EQ Arachis hypogaea HOM05D003570 ORTHO05D004207 1.4e-130 471.1 629 48.8
arahy.Tifrunner.gnm1.ann1.I1BHDP Arachis hypogaea HOM05D003570 ORTHO05D004207 2.6e-129 466.8 630 48.3
Ca_25131_v3 Cicer arietinum L. HOM05D001269 ORTHO05D001083 2.6e-129 466.8 617 48.6
FAN07G1326 Fragaria x ananassa HOM05D003570 ORTHO05D004207 4.4e-129 466.1 644 49.1
Psat5g092360 Pisum sativum HOM05D003570 ORTHO05D004207 5.7e-129 465.7 627 48.0
Phvul.001G256000 Phaseolus vulgaris HOM05D003570 ORTHO05D004207 1.7e-128 464.2 641 49.1
Aqoxy7G03799 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 2.2e-128 463.8 643 50.1
FAN22G0389 Fragaria x ananassa HOM05D003570 ORTHO05D004207 3.7e-128 463.0 632 47.6
PSO063G4933 Papaver somniferum HOM05D003570 ORTHO05D004207 2.0e-126 457.2 644 48.1
Glyma.11G244100 Glycine max HOM05D003570 ORTHO05D004207 7.8e-126 455.3 629 46.9
CsaV3_5G030790 Cucumis sativus L. HOM05D003570 ORTHO05D004207 1.7e-125 454.1 639 47.3
QL03p056574 Quercus lobata HOM05D003570 ORTHO05D004207 5.0e-125 452.6 625 50.9
ClCG05G026050 Citrullus lanatus HOM05D003570 ORTHO05D004207 1.9e-124 450.7 614 49.8
Atru.chr11.2174 Acer truncatum HOM05D003570 ORTHO05D004207 7.3e-124 448.7 649 47.3
Lj4g0018208 Lotus japonicus HOM05D003570 ORTHO05D004207 7.3e-124 448.7 629 50.4
FAN17G0862 Fragaria x ananassa HOM05D003570 ORTHO05D004207 3.4e-121 439.9 632 43.8
Lj6g0027950 Lotus japonicus HOM05D003570 ORTHO05D004207 3.4e-121 439.9 636 50.6
MD13G1104500 Malus domestica HOM05D003570 ORTHO05D004207 3.4e-121 439.9 572 51.6
TPR.G35967 Trifolium pratense HOM05D003570 ORTHO05D004207 1.3e-120 438.0 632 46.5
Lj3A151T25 Lonicera japonica HOM05D003570 ORTHO05D004207 1.7e-120 437.6 348 63.2
Medtr3g086460 Medicago truncatula HOM05D003570 ORTHO05D004207 6.4e-120 435.6 611 46.3
MELO3C011924.2 Cucumis melo HOM05D003570 ORTHO05D004207 1.6e-118 431.0 662 45.6
Lalb_Chr08g0230861 Lupinus albus HOM05D003570 ORTHO05D004207 3.9e-117 426.4 557 50.4
Sed0006332 Sechium edule HOM05D003570 ORTHO05D004207 4.3e-116 422.9 611 50.2
AUR62005511 Chenopodium quinoa HOM05D003570 ORTHO05D004207 1.3e-112 411.4 660 42.6
COL.COLO4_27904 Corchorus olitorius HOM05D003570 ORTHO05D004207 7.8e-110 402.1 671 39.2
ATR0824G009 Amborella trichopoda HOM05D003570 ORTHO05D004207 1.0e-109 401.7 626 45.7
QL03p056953 Quercus lobata HOM05D003570 ORTHO05D004207 4.3e-108 396.4 614 45.8
AL1G24790 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 4.6e-102 376.3 621 42.4
Dinv11043 Davidia involucrata HOM05D003570 ORTHO05D004207 2.3e-101 374.0 453 55.0
EL10As2g23162 Beta vulgaris HOM05D003570 ORTHO05D004207 3.9e-101 373.2 491 51.3
Thhalv10007079m.g Eutrema salsugineum HOM05D003570 ORTHO05D004207 1.5e-97 361.3 638 44.5
SEGI_05718 Sequoiadendron giganteum HOM05D003570 ORTHO05D004207 4.4e-97 359.8 642 41.6
Oeu038646.1 Olea europaea HOM05D003570 ORTHO05D004207 1.3e-96 358.2 454 49.1
BolC8t52217H Brassica oleracea HOM05D003570 ORTHO05D004207 3.8e-96 356.7 634 41.0
BcaC07g41664 Brassica carinata HOM05D003570 ORTHO05D004207 4.9e-96 356.3 647 42.8
BraA09t41684Z Brassica rapa HOM05D003570 ORTHO05D004207 6.4e-96 355.9 645 40.0
CARHR013490 Cardamine hirsuta HOM05D003570 ORTHO05D004207 6.4e-96 355.9 624 42.0
C08p46780 Brassica napus HOM05D003570 ORTHO05D004207 8.4e-96 355.5 661 39.9
Carub.0001s1286 Capsella rubella HOM05D003570 ORTHO05D004207 4.2e-95 353.2 650 39.8
A09p63350 Brassica napus HOM05D003570 ORTHO05D004207 7.1e-95 352.4 647 42.8
AT1G13120 Arabidopsis thaliana HOM05D003570 ORTHO05D004207 9.3e-95 352.1 624 42.0
Nitab4.5_0000229g0040 Nicotiana tabacum HOM05D003570 ORTHO05D004207 2.5e-92 344.0 260 72.3
Nitab4.5_0000229g0020 Nicotiana tabacum HOM05D003570 ORTHO05D004207 3.6e-91 340.1 340 65.3
PSO063G3251 Papaver somniferum HOM05D003570 ORTHO05D004207 9.0e-90 335.5 668 35.9
PSO063G1535 Papaver somniferum HOM05D003570 ORTHO05D004207 1.2e-89 335.1 323 52.3
PSO754G0035 Papaver somniferum HOM05D003570 ORTHO05D004207 3.8e-88 330.1 317 53.0
Sp1g11650 Schrenkiella parvula HOM05D003570 ORTHO05D004207 6.4e-88 329.3 671 37.6
CiPaw.02G032100 Carya illinoinensis HOM05D003570 ORTHO05D004207 4.2e-87 326.6 623 42.5
Os02g0596100 Oryza sativa ssp. japonica HOM05D003570 ORTHO05D004207 2.1e-86 324.3 628 41.6
vmacro17618 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 3.5e-86 323.6 542 43.7
Hma1.2p1_1533F.1_g289360 Hydrangea macrophylla HOM05D003570 ORTHO05D004207 7.9e-86 322.4 276 60.9
Dinv15203 Davidia involucrata HOM05D003570 ORTHO05D004207 3.7e-83 313.5 230 67.4
SHI04269 Sapria himalayana HOM05D003570 ORTHO05D004207 6.2e-83 312.8 550 38.0
Aa31LG1G1680 Aethionema arabicum HOM05D003570 ORTHO05D004207 1.4e-82 311.6 645 38.4
Zm00001eb212370 Zea mays HOM05D003570 ORTHO05D004207 2.6e-81 307.4 544 41.5
Sabra08G0139700 Salix brachista HOM05D003570 ORTHO05D004207 5.8e-81 306.2 329 49.8
Zm00001eb062020 Zea mays HOM05D003570 ORTHO05D004207 5.8e-81 306.2 552 39.9
Rhsim12G0108000 Rhododendron simsii HOM05D003570 ORTHO05D004207 3.8e-80 303.5 252 61.1
Aqoxy5G03688 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 2.8e-75 287.3 231 58.9
Pp3c9_21420 Physcomitrium patens HOM05D003570 ORTHO05D004207 1.7e-72 278.1 619 36.3
vmacro16171 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 1.6e-70 271.6 251 56.6
Rhsim12G0107900 Rhododendron simsii HOM05D003570 ORTHO05D004207 1.1e-68 265.4 364 56.6
AL6G47680 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 1.9e-68 264.6 566 35.9
Aqoxy1G03220 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 1.6e-67 261.5 305 47.9
Mapoly0004s0250 Marchantia polymorpha HOM05D003570 ORTHO05D004207 3.1e-66 257.3 610 37.7
vmacro16170 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 2.1e-62 244.6 390 49.2
vmacro16173 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 1.1e-58 232.3 243 52.3
SMO367G0645 Selaginella moellendorffii HOM05D003570 ORTHO05D004207 4.7e-54 216.9 629 31.5
CSS0045431 Camellia sinensis var. sinensis HOM05D003570 ORTHO05D004207 2.8e-51 207.6 158 66.5
CBR_g38118 Chara braunii HOM05D003570 ORTHO05D004207 2.8e-51 207.6 707 33.7
vmacro16172 Vaccinium macrocarpon HOM05D003570 ORTHO05D004207 4.8e-51 206.8 436 43.6
Sopen04g013730 Solanum pennellii HOM05D003570 ORTHO05D004207 5.3e-50 203.4 122 80.3
FAN08G0154 Fragaria x ananassa HOM05D003570 ORTHO05D004207 1.0e-48 199.1 470 38.1
Haze_11814 Corylus avellana HOM05D001314 ORTHO05D001165 1.7e-48 198.4 199 54.8
Thhalv10001133m.g Eutrema salsugineum HOM05D003570 ORTHO05D004207 8.5e-48 196.1 603 28.7
CDE06G1553 Ceratophyllum demersum HOM05D003570 ORTHO05D004207 1.4e-47 195.3 177 50.8
Haze_20779 Corylus avellana HOM05D003570 ORTHO05D004207 1.9e-47 194.9 278 43.5
unitig_22.g6426 Utricularia gibba HOM05D003570 ORTHO05D004207 6.7e-45 186.4 166 53.0
CSS0031984 Camellia sinensis var. sinensis HOM05D003570 ORTHO05D004207 1.2e-41 175.6 228 44.7
AagrBONN_evm.TU.Sc2ySwM_362.2178 Anthoceros agrestis HOM05D003570 ORTHO05D004207 4.4e-36 157.1 169 45.0
Aqoxy5G03687 Aquilegia oxysepala HOM05D003570 ORTHO05D004207 3.7e-35 154.1 247 40.5
Hma1.2p1_1533F.1_g289350 Hydrangea macrophylla HOM05D003570 ORTHO05D004207 5.3e-34 150.2 149 53.0
FAN13G1935 Fragaria x ananassa HOM05D003570 ORTHO05D004207 1.0e-32 146.0 394 40.4
EL10Ac8g19584 Beta vulgaris HOM05D003570 ORTHO05D004207 9.4e-31 139.4 119 54.6
MCO05G059 Micromonas commoda HOM05D003570 ORTHO05D004207 3.6e-30 137.5 327 27.2
Lj3A151T24 Lonicera japonica HOM05D003570 ORTHO05D004207 6.8e-29 133.3 160 50.0
Hma1.2p1_0054F.1_g030990 Hydrangea macrophylla HOM05D003570 ORTHO05D004207 1.8e-26 125.2 89 62.9
Cre06.g300900 Chlamydomonas reinhardtii HOM05D003570 ORTHO05D004207 4.1e-26 124.0 298 29.9
TAR374G0522 Trochodendron aralioides HOM05D003570 ORTHO05D004207 4.1e-26 124.0 102 61.8
BolC4t26878H Brassica oleracea HOM05D003570 ORTHO05D004207 7.0e-26 123.2 197 40.1
AL2G22720 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 3.5e-25 120.9 140 50.0
AT4G05523 Arabidopsis thaliana HOM05D003570 ORTHO05D004207 5.9e-25 120.2 204 39.7
Medtr7g034350 Medicago truncatula HOM05D003570 ORTHO05D004207 5.9e-25 120.2 178 40.4
FAN08G3485 Fragaria x ananassa HOM05D003570 ORTHO05D004207 1.3e-24 119.0 118 50.0
A07p19900 Brassica napus HOM05D003570 ORTHO05D004207 1.7e-24 118.6 197 37.1
CAN.G149.33 Capsicum annuum HOM05D001546 ORTHO05D015824 8.6e-24 116.3 67 89.6
C04p53310 Brassica napus HOM05D003570 ORTHO05D004207 1.9e-23 115.2 200 39.0
A07p18160 Brassica napus HOM05D003570 ORTHO05D004207 3.3e-23 114.4 196 36.2
BraA01t00580Z Brassica rapa HOM05D003570 ORTHO05D004207 3.3e-23 114.4 196 36.2
CDE06G0651 Ceratophyllum demersum HOM05D003570 ORTHO05D004207 6.1e-22 110.2 270 39.3
BcaC02g08536 Brassica carinata HOM05D003570 ORTHO05D004207 1.0e-21 109.4 164 40.2
PRCOL_00001147 Prasinoderma coloniale HOM05D003570 ORTHO05D004207 1.8e-21 108.6 288 28.8
AagrBONN_evm.TU.Sc2ySwM_344.4464 Anthoceros agrestis HOM05D003570 ORTHO05D004207 8.9e-21 106.3 470 32.3
BcaC06g34341 Brassica carinata HOM05D003570 ORTHO05D004207 4.4e-20 104.0 192 33.3
EL10As2g23164 Beta vulgaris HOM05D003570 ORTHO05D004207 2.8e-19 101.3 156 40.4
BcaC05g25085 Brassica carinata HOM05D003570 ORTHO05D004207 2.8e-19 101.3 214 35.5
BolC5t29767H Brassica oleracea HOM05D003570 ORTHO05D004207 6.3e-19 100.1 190 32.6
C04p53220 Brassica napus HOM05D003570 ORTHO05D004207 4.1e-18 97.4 146 41.8
BcaC05g25084 Brassica carinata HOM05D003570 ORTHO05D004207 3.5e-17 94.4 183 33.3
Glyma.18G013000 Glycine max HOM05D003570 ORTHO05D004207 4.5e-17 94.0 81 50.6
Solyc04g026000.2 Solanum lycopersicum HOM05D003570 ORTHO05D004207 7.8e-17 93.2 133 48.1
Actinidia15112 Actinidia chinensis HOM05D003570 ORTHO05D004207 1.3e-16 92.4 85 52.9
unitig_22.g6425 Utricularia gibba HOM05D003570 ORTHO05D004207 1.7e-16 92.0 176 37.5
TAR374G0931 Trochodendron aralioides HOM05D003570 ORTHO05D004207 8.6e-16 89.7 93 50.5
Actinidia15111 Actinidia chinensis HOM05D003570 ORTHO05D004207 1.5e-15 89.0 71 62.0
CAN.G189.38 Capsicum annuum HOM05D003570 ORTHO05D004207 1.5e-15 89.0 118 50.0
AL2G22730 Arabidopsis lyrata HOM05D003570 ORTHO05D004207 1.9e-15 88.6 108 45.4
Sp2g10400 Schrenkiella parvula HOM05D003570 ORTHO05D004207 3.6e-14 84.3 108 44.4
FvH4_5g15750 Fragaria vesca HOM05D003570 ORTHO05D004207 1.4e-13 82.4 72 58.3
CAN.G294.19 Capsicum annuum HOM05D003570 ORTHO05D004207 2.0e-12 78.6 196 35.7
C05p10220 Brassica napus HOM05D003570 ORTHO05D004207 2.6e-12 78.2 121 33.9
EL10Ac1g01653 Beta vulgaris HOM05D003570 ORTHO05D004207 1.3e-11 75.9 58 60.3
MD05G1151500 Malus domestica HOM05D003570 ORTHO05D004207 2.9e-11 74.7 49 69.4
Hund04894 Selenicereus undatus HOM05D003570 ORTHO05D004207 1.2e-09 69.3 68 51.5
FvH4_5g15741 Fragaria vesca HOM05D003570 ORTHO05D004207 1.6e-09 68.9 147 36.1
FAN18G0384 Fragaria x ananassa HOM05D003570 ORTHO05D004207 1.6e-09 68.9 147 36.1
C03p39130 Brassica napus HOM05D003570 ORTHO05D004207 7.8e-09 66.6 102 38.2
HanXRQChr13g0391121 Helianthus annuus HOM05D000321 ORTHO05D000204 2.3e-08 65.1 66 48.5
CARHR253470 Cardamine hirsuta HOM05D003570 ORTHO05D004207 3.0e-08 64.7 153 32.7
C07p30170 Brassica napus HOM05D003570 ORTHO05D004207 5.0e-08 63.9 70 45.7
QL93p0107_0801 Quercus lobata HOM05D003570 ORTHO05D004207 6.6e-08 63.5 135 37.8
CDE06G1606 Ceratophyllum demersum HOM05D003570 ORTHO05D004207 1.1e-07 62.8 81 42.0
C07p30160 Brassica napus HOM05D003570 ORTHO05D004207 2.5e-07 61.6 72 41.7
BcaC02g12092 Brassica carinata HOM05D003570 ORTHO05D004207 4.3e-07 60.8 46 52.2
PSO063G3896 Papaver somniferum HOM05D003570 ORTHO05D004207 1.2e-06 59.3 238 28.2


User provided reference genes

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