Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G157.17 Capsicum annuum HOM05D005682 ORTHO05D007050 4.6e-160 567.8 275 100.0
Lj6A721G56 Lonicera japonica HOM05D005682 ORTHO05D007050 9.5e-81 304.3 266 60.5
Dinv11711 Davidia involucrata HOM05D005682 ORTHO05D007050 9.9e-78 294.3 253 59.7
Actinidia04079 Actinidia chinensis HOM05D005682 ORTHO05D007050 3.6e-72 275.8 267 55.4
GSVIVG01010197001 Vitis vinifera HOM05D005682 ORTHO05D007050 8.1e-72 274.6 257 54.5
Migut.L00859 Erythranthe guttata HOM05D005682 ORTHO05D007050 4.4e-70 268.9 253 52.2
Sopen02g009170 Solanum pennellii HOM05D005682 ORTHO05D007050 1.3e-69 267.3 170 77.1
Rhsim09G0074000 Rhododendron simsii HOM05D005682 ORTHO05D007050 8.4e-69 264.6 253 53.8
Oeu033538.1 Olea europaea HOM05D005682 ORTHO05D007050 1.4e-68 263.8 252 54.4
MSTRG.433 Avicennia marina HOM05D005682 ORTHO05D007050 4.2e-68 262.3 253 50.2
ECA246G2025 Erigeron canadensis HOM05D005682 ORTHO05D007050 3.0e-66 256.1 252 53.6
TAR622G0093 Trochodendron aralioides HOM05D005682 ORTHO05D007050 8.7e-66 254.6 249 52.2
vmacro10900 Vaccinium macrocarpon HOM05D005682 ORTHO05D007050 1.1e-65 254.2 271 51.7
Cfa008712 Carpinus fangiana HOM05D005682 ORTHO05D007050 4.8e-64 248.8 243 55.1
CiPaw.05G167300 Carya illinoinensis HOM05D005682 ORTHO05D007050 1.8e-63 246.9 234 55.6
Cc11_g04390 Coffea canephora HOM05D005682 ORTHO05D007050 3.1e-63 246.1 261 51.0
HanXRQChr17g0540811 Helianthus annuus HOM05D005682 ORTHO05D007050 1.2e-62 244.2 253 51.8
Haze_11722 Corylus avellana HOM05D005682 ORTHO05D007050 2.6e-62 243.0 245 54.7
TWI74G0147 Tripterygium wilfordii HOM05D005682 ORTHO05D007050 3.4e-62 242.7 248 48.4
Prupe.1G345800 Prunus persica HOM05D005682 ORTHO05D007050 7.6e-62 241.5 249 52.2
RcHm_v2.0_Chr4g0446491 Rosa chinensis HOM05D005682 ORTHO05D007050 1.3e-61 240.7 252 48.4
Potri.007G070400 Populus trichocarpa HOM05D005682 ORTHO05D007050 2.2e-61 240.0 259 48.3
Atru.chr11.1182 Acer truncatum HOM05D005682 ORTHO05D007050 2.9e-61 239.6 241 50.2
Duzib132G1218 Durio zibethinus HOM05D005682 ORTHO05D007050 2.9e-61 239.6 236 49.6
Nitab4.5_0002392g0020 Nicotiana tabacum HOM05D005682 ORTHO05D007050 3.8e-61 239.2 159 77.4
Aqoxy2G03805 Aquilegia oxysepala HOM05D005682 ORTHO05D007050 1.1e-60 237.7 249 49.8
Solyc02g055460.3 Solanum lycopersicum HOM05D005682 ORTHO05D007050 1.1e-60 237.7 131 86.3
PGR044G2237 Punica granatum HOM05D005682 ORTHO05D007050 4.2e-60 235.7 249 49.0
Sabra07G0059100 Salix brachista HOM05D005682 ORTHO05D007050 4.2e-60 235.7 259 47.1
CANSAT64G0530 Cannabis sativa HOM05D005682 ORTHO05D007050 9.3e-60 234.6 245 49.0
Lsat_1_v5_gn_3_33580 Lactuca sativa HOM05D005682 ORTHO05D007050 2.7e-59 233.0 253 52.2
Sabra07G0059000 Salix brachista HOM05D005682 ORTHO05D007050 2.7e-59 233.0 259 46.7
Nn4g24940 Nelumbo nucifera HOM05D005682 ORTHO05D007050 4.6e-59 232.3 249 48.6
Duzib052G0545 Durio zibethinus HOM05D005682 ORTHO05D007050 5.1e-58 228.8 237 47.7
Cc11_g00090 Coffea canephora HOM05D005682 ORTHO05D007050 1.3e-56 224.2 260 46.9
PSO063G1542 Papaver somniferum HOM05D005682 ORTHO05D007050 1.6e-56 223.8 250 47.6
DCAR_002567 Daucus carota HOM05D005682 ORTHO05D007050 2.1e-56 223.4 247 46.6
Peaxi162Scf00363g00730 Petunia axillaris HOM05D005682 ORTHO05D007050 2.8e-56 223.0 126 83.3
MD13G1007100 Malus domestica HOM05D005682 ORTHO05D007050 1.1e-55 221.1 249 47.4
SalBow2G1379 Salvia bowleyana HOM05D005682 ORTHO05D007050 1.1e-55 221.1 260 45.0
MELO3C023602.2 Cucumis melo HOM05D005682 ORTHO05D007050 3.1e-55 219.5 252 47.2
Sc06g0007890 Simmondsia chinensis HOM05D005682 ORTHO05D007050 3.1e-55 219.5 250 46.0
CsaV3_7G030540 Cucumis sativus L. HOM05D005682 ORTHO05D007050 5.3e-55 218.8 252 47.2
FAN17G1521 Fragaria x ananassa HOM05D005682 ORTHO05D007050 9.0e-55 218.0 256 44.1
PSO782G3049 Papaver somniferum HOM05D005682 ORTHO05D007050 1.2e-54 217.6 250 46.4
FvH4_4g36771 Fragaria vesca HOM05D005682 ORTHO05D007050 1.5e-54 217.2 243 46.5
ClCG09G004600 Citrullus lanatus HOM05D005682 ORTHO05D007050 4.5e-54 215.7 251 45.4
Eucgr.J00855 Eucalyptus grandis HOM05D005682 ORTHO05D007050 4.9e-53 212.2 260 43.8
EL10Ac9g20684 Beta vulgaris HOM05D005682 ORTHO05D007050 8.4e-53 211.5 246 43.1
Gohir.A13G059600 Gossypium hirsutum HOM05D005682 ORTHO05D007050 1.4e-52 210.7 235 44.7
Gorai.013G070900 Gossypium raimondii HOM05D005682 ORTHO05D007050 3.2e-52 209.5 235 44.7
Sed0007950 Sechium edule HOM05D005682 ORTHO05D007050 7.1e-52 208.4 253 44.3
Gohir.D13G062400 Gossypium hirsutum HOM05D005682 ORTHO05D007050 4.6e-51 205.7 235 44.3
Glyma.11G102200 Glycine max HOM05D005682 ORTHO05D007050 3.0e-50 203.0 249 43.4
FAN07G1253 Fragaria x ananassa HOM05D005682 ORTHO05D007050 8.7e-50 201.4 250 42.8
QL03p043857 Quercus lobata HOM05D005682 ORTHO05D007050 8.7e-50 201.4 271 43.9
Lj3g0015709 Lotus japonicus HOM05D005682 ORTHO05D007050 1.5e-49 200.7 240 44.2
Lalb_Chr01g0001491 Lupinus albus HOM05D005682 ORTHO05D007050 1.9e-49 200.3 256 43.4
arahy.Tifrunner.gnm1.ann1.H4B4B0 Arachis hypogaea HOM05D005682 ORTHO05D007050 5.6e-49 198.7 259 41.7
Hund13152 Selenicereus undatus HOM05D005682 ORTHO05D007050 5.6e-49 198.7 251 43.0
unitig_699.g19973 Utricularia gibba HOM05D005682 ORTHO05D007050 5.6e-49 198.7 252 42.5
AUR62038663 Chenopodium quinoa HOM05D005682 ORTHO05D007050 7.4e-49 198.4 256 41.0
AL3G33230 Arabidopsis lyrata HOM05D005682 ORTHO05D007050 9.6e-49 198.0 252 40.1
VMungo1127G0377 Vigna mungo HOM05D005682 ORTHO05D007050 1.3e-48 197.6 260 42.3
Peaxi162Scf00363g00073 Petunia axillaris HOM05D005682 ORTHO05D007050 1.6e-48 197.2 114 85.1
Phvul.011G031200 Phaseolus vulgaris HOM05D005682 ORTHO05D007050 2.8e-48 196.4 260 41.9
ATR0618G435 Amborella trichopoda HOM05D005682 ORTHO05D000625 6.9e-47 191.8 286 39.5
Thhalv10019965m.g Eutrema salsugineum HOM05D005682 ORTHO05D007050 6.9e-47 191.8 249 39.4
Carub.0003s1966 Capsella rubella HOM05D005682 ORTHO05D007050 2.0e-46 190.3 250 39.6
THA.LOC104826522 Tarenaya hassleriana HOM05D005682 ORTHO05D007050 2.0e-46 190.3 250 41.2
Ah.14g085910 Amaranthus hybridus HOM05D005682 ORTHO05D007050 2.6e-46 189.9 251 39.8
Psat7g173480 Pisum sativum HOM05D005682 ORTHO05D007050 2.6e-46 189.9 247 40.1
AT3G19780 Arabidopsis thaliana HOM05D005682 ORTHO05D007050 1.7e-45 187.2 242 40.9
Medtr4g074610 Medicago truncatula HOM05D005682 ORTHO05D007050 3.8e-45 186.0 245 40.0
BcaC05g28416 Brassica carinata HOM05D005682 ORTHO05D007050 6.5e-45 185.3 258 38.0
BraA05t21829Z Brassica rapa HOM05D005682 ORTHO05D007050 8.4e-45 184.9 257 38.5
BcaB06g26047 Brassica carinata HOM05D005682 ORTHO05D007050 1.1e-44 184.5 257 38.1
AUR62018178 Chenopodium quinoa HOM05D005682 ORTHO05D007050 1.9e-44 183.7 292 36.6
BcaC05g28407 Brassica carinata HOM05D005682 ORTHO05D007050 3.2e-44 183.0 257 37.7
Ca_03025_v3 Cicer arietinum L. HOM05D005682 ORTHO05D007050 4.2e-44 182.6 238 39.1
Solyc02g055470.2 Solanum lycopersicum HOM05D005682 ORTHO05D007050 7.1e-44 181.8 97 91.8
Aa31LG8G6560 Aethionema arabicum HOM05D005682 ORTHO05D007050 9.3e-44 181.4 246 39.0
TPR.G32358 Trifolium pratense HOM05D005682 ORTHO05D007050 1.2e-43 181.0 234 38.9
BolC5t33225H Brassica oleracea HOM05D005682 ORTHO05D007050 2.7e-43 179.9 261 38.3
Sopen02g009200 Solanum pennellii HOM05D005682 ORTHO05D007050 2.7e-43 179.9 96 91.7
Zm00001eb221340 Zea mays HOM05D005682 ORTHO05D007050 7.9e-43 178.3 248 39.5
Nitab4.5_0000139g0150 Nicotiana tabacum HOM05D005682 ORTHO05D007050 1.3e-42 177.6 97 87.6
CARHR095290 Cardamine hirsuta HOM05D005682 ORTHO05D007050 3.9e-42 176.0 254 38.6
SHI13894 Sapria himalayana HOM05D005682 ORTHO05D007050 6.7e-42 175.3 257 37.0
HPP92_008562 Vanilla planifolia HOM05D005682 ORTHO05D007050 6.7e-42 175.3 258 38.0
Sp3g17800 Schrenkiella parvula HOM05D005682 ORTHO05D007050 2.6e-38 163.3 240 34.6
CDE04G1313 Ceratophyllum demersum HOM05D005682 ORTHO05D007050 1.0e-34 151.4 193 42.0
CSS0001307 Camellia sinensis var. sinensis HOM05D005682 ORTHO05D007050 7.4e-33 145.2 133 54.9
Thecc.02G161600 Theobroma cacao HOM05D005682 ORTHO05D007050 5.3e-31 139.0 121 50.4
Manes.11G108701 Manihot esculenta HOM05D005682 ORTHO05D007050 2.6e-30 136.7 144 50.7
Ciclev10030666m.g Citrus clementina HOM05D005682 ORTHO05D007050 8.5e-29 131.7 126 47.6
COL.COLO4_08119 Corchorus olitorius HOM05D005682 ORTHO05D007050 2.0e-22 110.5 105 52.4
arahy.Tifrunner.gnm1.ann1.3I7IYH Arachis hypogaea HOM05D005682 ORTHO05D007050 4.5e-22 109.4 172 37.2
C05p45010 Brassica napus HOM05D005682 ORTHO05D007050 8.5e-21 105.1 128 36.7
BraA05t21816Z Brassica rapa HOM05D005682 ORTHO05D007050 2.5e-20 103.6 125 36.8
A05p29780 Brassica napus HOM05D005682 ORTHO05D007050 7.2e-20 102.1 128 35.9
C05p44920 Brassica napus HOM05D005682 ORTHO05D007050 6.1e-19 99.0 117 35.9
SEGI_38899 Sequoiadendron giganteum HOM05D005682 ORTHO05D007050 1.0e-18 98.2 309 24.3
A05p29790 Brassica napus HOM05D005682 ORTHO05D007050 3.9e-18 96.3 93 52.7
CSS0026201 Camellia sinensis var. sinensis HOM05D005682 ORTHO05D007050 2.0e-17 94.0 93 52.7
Aqoxy2G03797 Aquilegia oxysepala HOM05D005682 ORTHO05D007050 1.2e-11 74.7 70 52.9
AagrBONN_evm.TU.Sc2ySwM_340.174 Anthoceros agrestis HOM05D005682 ORTHO05D007050 8.2e-08 62.0 85 31.8
FvH4_4g15932 Fragaria vesca HOM05D005682 ORTHO05D007050 1.1e-07 61.6 57 50.9


User provided reference genes

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