Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G157.15 Capsicum annuum HOM05D007631 ORTHO05D009566 6.6e-142 507.3 244 100.0
PGSC0003DMG400029978 Solanum tuberosum HOM05D007631 ORTHO05D009566 1.0e-89 334.0 235 71.1
Nitab4.5_0002392g0040 Nicotiana tabacum HOM05D007631 ORTHO05D009566 3.8e-89 332.0 245 71.8
Solyc02g055440.4 Solanum lycopersicum HOM05D007631 ORTHO05D009566 5.5e-88 328.2 236 70.3
Sopen02g009160 Solanum pennellii HOM05D007631 ORTHO05D009566 2.7e-87 325.9 236 69.9
Cc11_g05090 Coffea canephora HOM05D007631 ORTHO05D009566 9.1e-75 284.3 209 64.6
Gohir.A03G110300 Gossypium hirsutum HOM05D007631 ORTHO05D009566 5.1e-70 268.5 246 56.5
Duzib268G1119 Durio zibethinus HOM05D007631 ORTHO05D009566 8.8e-70 267.7 206 63.6
Potri.005G094700 Populus trichocarpa HOM05D007631 ORTHO05D009566 7.4e-69 264.6 199 64.3
Gohir.D02G134900 Gossypium hirsutum HOM05D007631 ORTHO05D009566 2.8e-68 262.7 246 55.3
CiPaw.09G164100 Carya illinoinensis HOM05D007631 ORTHO05D009566 5.3e-67 258.5 235 56.2
Hma1.2p1_0499F.1_g166830 Hydrangea macrophylla HOM05D007631 ORTHO05D009566 7.0e-67 258.1 246 56.1
TWI53G1419 Tripterygium wilfordii HOM05D007631 ORTHO05D009566 9.1e-67 257.7 239 56.5
Manes.04G066700 Manihot esculenta HOM05D007631 ORTHO05D009566 3.4e-66 255.8 201 62.7
Nn4g24939 Nelumbo nucifera HOM05D007631 ORTHO05D009566 1.3e-65 253.8 236 56.4
AUR62015208 Chenopodium quinoa HOM05D007631 ORTHO05D009566 2.2e-65 253.1 215 56.7
EL10Ac9g22926 Beta vulgaris HOM05D007631 ORTHO05D009566 2.9e-65 252.7 213 57.3
FAN12G2650 Fragaria x ananassa HOM05D007631 ORTHO05D009566 8.0e-63 244.6 248 52.4
Ciclev10032529m.g Citrus clementina HOM05D007631 ORTHO05D009566 1.4e-62 243.8 243 52.3
SalBow6G3201 Salvia bowleyana HOM05D007631 ORTHO05D009566 2.3e-62 243.0 197 59.9
PGR119G1778 Punica granatum HOM05D007631 ORTHO05D009566 1.1e-61 240.7 191 58.1
GSVIVG01010153001 Vitis vinifera HOM05D007631 ORTHO05D009566 1.1e-61 240.7 220 58.2
Eucgr.J00853 Eucalyptus grandis HOM05D007631 ORTHO05D009566 2.0e-61 240.0 189 60.8
Dinv17601 Davidia involucrata HOM05D007631 ORTHO05D009566 9.7e-61 237.7 239 53.1
MD16G1250700 Malus domestica HOM05D007631 ORTHO05D009566 2.2e-60 236.5 215 55.3
ECA246G0740 Erigeron canadensis HOM05D007631 ORTHO05D009566 6.3e-60 235.0 197 58.9
FAN07G2143 Fragaria x ananassa HOM05D007631 ORTHO05D009566 6.3e-60 235.0 257 50.2
Lalb_Chr03g0024841 Lupinus albus HOM05D007631 ORTHO05D009566 1.1e-59 234.2 203 55.7
CsaV3_3G031500 Cucumis sativus L. HOM05D007631 ORTHO05D009566 1.8e-59 233.4 200 59.0
ClCG10G011860 Citrullus lanatus HOM05D007631 ORTHO05D009566 7.0e-59 231.5 192 58.9
Lsat_1_v5_gn_3_33601 Lactuca sativa HOM05D007631 ORTHO05D009566 9.1e-59 231.1 182 61.5
CsaV3_3G032520 Cucumis sativus L. HOM05D007631 ORTHO05D009566 1.6e-58 230.3 200 58.5
MELO3C024033.2 Cucumis melo HOM05D007631 ORTHO05D009566 2.9e-57 226.1 190 58.4
Aa31LG8G6570 Aethionema arabicum HOM05D007631 ORTHO05D009566 8.5e-57 224.6 230 52.2
AL3G33250 Arabidopsis lyrata HOM05D007631 ORTHO05D009566 4.7e-55 218.8 234 49.6
Carub.0003s1968 Capsella rubella HOM05D007631 ORTHO05D009566 4.7e-55 218.8 233 50.2
AT3G19800 Arabidopsis thaliana HOM05D007631 ORTHO05D009566 6.1e-55 218.4 236 49.6
HanXRQChr17g0540801 Helianthus annuus HOM05D007631 ORTHO05D009566 8.0e-55 218.0 176 60.8
Sp3g17810 Schrenkiella parvula HOM05D007631 ORTHO05D009566 1.8e-54 216.9 230 49.1
unitig_699.g19551 Utricularia gibba HOM05D007631 ORTHO05D009566 3.0e-54 216.1 185 57.3
C01p44350 Brassica napus HOM05D007631 ORTHO05D009566 4.0e-54 215.7 185 56.8
BolC1t04400H Brassica oleracea HOM05D007631 ORTHO05D009566 4.0e-54 215.7 185 56.8
Thhalv10021444m.g Eutrema salsugineum HOM05D007631 ORTHO05D009566 4.0e-54 215.7 182 56.6
PSO478G5292 Papaver somniferum HOM05D007631 ORTHO05D009566 4.0e-54 215.7 177 59.3
A01p34940 Brassica napus HOM05D007631 ORTHO05D009566 6.7e-54 214.9 183 56.8
BraA01t03577Z Brassica rapa HOM05D007631 ORTHO05D009566 6.7e-54 214.9 183 56.8
Lj3g0001232 Lotus japonicus HOM05D007631 ORTHO05D009566 6.7e-54 214.9 191 58.6
Glyma.11G102300 Glycine max HOM05D007631 ORTHO05D009566 8.8e-54 214.5 191 56.0
VMungo1127G1566 Vigna mungo HOM05D007631 ORTHO05D009566 2.0e-53 213.4 212 50.0
CARHR095310 Cardamine hirsuta HOM05D007631 ORTHO05D009566 5.7e-53 211.8 238 47.9
FAN17G2236 Fragaria x ananassa HOM05D007631 ORTHO05D009566 3.7e-52 209.1 211 52.1
COL.COLO4_27670 Corchorus olitorius HOM05D007631 ORTHO05D009566 9.1e-51 204.5 244 48.4
CANSAT64G0359 Cannabis sativa HOM05D007631 ORTHO05D009566 1.2e-50 204.1 187 55.1
Hund24286 Selenicereus undatus HOM05D007631 ORTHO05D009566 2.0e-50 203.4 193 54.4
Medtr4g074590 Medicago truncatula HOM05D007631 ORTHO05D009566 2.7e-50 203.0 249 43.8
Oeu033537.1 Olea europaea HOM05D007631 ORTHO05D009566 1.7e-49 200.3 145 68.3
PSO017G5087 Papaver somniferum HOM05D007631 ORTHO05D009566 5.5e-48 195.3 158 58.2
Peaxi162Scf00363g00724 Petunia axillaris HOM05D007631 ORTHO05D009566 2.1e-47 193.4 104 86.5
TPR.G32328 Trifolium pratense HOM05D007631 ORTHO05D009566 5.2e-46 188.7 209 45.9
DCAR_030399 Daucus carota HOM05D007631 ORTHO05D009566 1.5e-45 187.2 229 45.9
Ca_03026_v3 Cicer arietinum L. HOM05D007631 ORTHO05D009566 2.6e-45 186.4 191 50.8
arahy.Tifrunner.gnm1.ann1.C4PR70 Arachis hypogaea HOM05D007631 ORTHO05D009566 1.1e-43 181.0 228 46.9
vmacro10901 Vaccinium macrocarpon HOM05D007631 ORTHO05D009566 1.8e-43 180.3 229 42.8
HPP92_025628 Vanilla planifolia HOM05D007631 ORTHO05D009566 1.8e-43 180.3 185 50.3
Nitab4.5_0000139g0130 Nicotiana tabacum HOM05D007631 ORTHO05D009566 7.0e-43 178.3 244 46.3
RcHm_v2.0_Chr4g0399891 Rosa chinensis HOM05D007631 ORTHO05D009566 9.1e-43 177.9 178 52.2
Sc10g0006760 Simmondsia chinensis HOM05D007631 ORTHO05D009566 9.1e-43 177.9 187 48.7
FvH4_4g07430 Fragaria vesca HOM05D007631 ORTHO05D009566 5.9e-42 175.3 176 50.6
Phvul.011G031300 Phaseolus vulgaris HOM05D007631 ORTHO05D009566 7.7e-42 174.9 214 43.0
SGA_v2.0_scaffold88G27232 Striga asiatica HOM05D007631 ORTHO05D009566 3.3e-40 169.5 131 60.3
Haze_20362 Corylus avellana HOM05D007631 ORTHO05D009566 1.2e-39 167.5 261 41.8
Gorai.005G150800 Gossypium raimondii HOM05D007631 ORTHO05D009566 2.8e-39 166.4 180 49.4
Sed0008358 Sechium edule HOM05D007631 ORTHO05D009566 6.1e-39 165.2 237 43.5
QL03p043760 Quercus lobata HOM05D007631 ORTHO05D009566 8.0e-39 164.9 113 66.4
Thecc.02G311600 Theobroma cacao HOM05D007631 ORTHO05D009566 8.0e-39 164.9 141 56.7
Cpa.g.sc63.2 Carica papaya HOM05D007631 ORTHO05D009566 2.3e-38 163.3 113 66.4
Prupe.1G077300 Prunus persica HOM05D007631 ORTHO05D009566 2.3e-38 163.3 148 54.1
ATR0618G124 Amborella trichopoda HOM05D007631 ORTHO05D009566 2.6e-37 159.8 132 60.6
Os04g0525000 Oryza sativa ssp. japonica HOM05D007631 ORTHO05D009566 4.4e-37 159.1 223 39.9
MBI06_g36505_MAGBIO Magnolia biondii HOM05D007631 ORTHO05D009566 7.0e-35 151.8 149 53.7
Zm00001eb076870 Zea mays HOM05D007631 ORTHO05D009566 7.0e-35 151.8 204 41.2
Psat7g173560 Pisum sativum HOM05D007631 ORTHO05D009566 4.5e-34 149.1 189 46.0
CDE05G3190 Ceratophyllum demersum HOM05D005588 ORTHO05D006615 2.3e-33 146.7 162 48.8
Atru.chr11.1322 Acer truncatum HOM05D007631 ORTHO05D009566 3.6e-31 139.4 113 55.8
FAN22G0357 Fragaria x ananassa HOM05D007631 ORTHO05D009566 4.7e-31 139.0 143 47.6
Migut.E00703 Erythranthe guttata HOM05D007631 ORTHO05D009566 1.3e-25 120.9 104 55.8
Aqoxy7G02010 Aquilegia oxysepala HOM05D007631 ORTHO05D009566 1.7e-25 120.6 124 50.0
Migut.E00614 Erythranthe guttata HOM05D007631 ORTHO05D009566 1.7e-25 120.6 104 55.8
Atru.BG.289.p Acer truncatum HOM05D007631 ORTHO05D009566 1.2e-23 114.4 96 52.1
TAR622G1133 Trochodendron aralioides HOM05D007631 ORTHO05D009566 1.1e-22 111.3 91 56.0
Pp3c1_30620 Physcomitrium patens HOM05D007631 ORTHO05D009566 1.8e-22 110.5 226 31.0
Cfa019889 Carpinus fangiana HOM05D007631 ORTHO05D009566 2.1e-18 97.1 69 63.8
AagrBONN_evm.TU.Sc2ySwM_228.2165 Anthoceros agrestis HOM05D007631 ORTHO05D009566 5.1e-17 92.4 210 31.0
CSS0013150 Camellia sinensis var. sinensis HOM05D007631 ORTHO05D009566 1.5e-13 80.9 57 71.9
SGA_v2.0_scaffold88G27234 Striga asiatica HOM05D007631 ORTHO05D009566 5.6e-08 62.4 72 43.1
arahy.Tifrunner.gnm1.ann1.GZ47R7 Arachis hypogaea HOM05D007631 ORTHO05D009566 1.1e-06 58.2 77 45.5


User provided reference genes

Program Settings