Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1565.3 Capsicum annuum HOM05D005513 ORTHO05D006848 3.2e-107 391.7 192 100.0
CAN.G2075.11 Capsicum annuum HOM05D005513 ORTHO05D006848 5.4e-83 311.2 285 60.4
CAN.G575.118 Capsicum annuum HOM05D005513 ORTHO05D006848 5.4e-83 311.2 317 56.5
CAN.G2177.12 Capsicum annuum HOM05D005513 ORTHO05D006848 2.3e-81 305.8 317 55.8
CAN.G1579.15 Capsicum annuum HOM05D005513 ORTHO05D006848 5.1e-81 304.7 317 55.5
CAN.G575.103 Capsicum annuum HOM05D005513 ORTHO05D006848 6.2e-79 297.7 312 55.4
Nitab4.5_0001936g0090 Nicotiana tabacum HOM05D005513 ORTHO05D006848 5.8e-77 291.2 317 52.7
PGSC0003DMG400004444 Solanum tuberosum HOM05D005513 ORTHO05D006848 4.9e-76 288.1 317 52.7
Nitab4.5_0008882g0020 Nicotiana tabacum HOM05D005513 ORTHO05D006848 1.9e-75 286.2 317 51.7
Sopen12g019010 Solanum pennellii HOM05D005513 ORTHO05D006848 3.2e-75 285.4 318 51.9
Peaxi162Scf00544g00118 Petunia axillaris HOM05D005513 ORTHO05D006848 2.5e-72 275.8 317 51.4
Peaxi162Scf00544g00117 Petunia axillaris HOM05D005513 ORTHO05D006848 2.5e-67 259.2 315 48.9
Migut.F01838 Erythranthe guttata HOM05D005513 ORTHO05D006848 9.7e-64 247.3 319 46.1
SalBow3G2273 Salvia bowleyana HOM05D005513 ORTHO05D006848 6.3e-63 244.6 319 45.8
MSTRG.8188 Avicennia marina HOM05D005513 ORTHO05D006848 5.9e-61 238.0 319 45.5
Actinidia11441 Actinidia chinensis HOM05D005513 ORTHO05D006848 1.7e-60 236.5 329 45.6
Cc09_g04220 Coffea canephora HOM05D005513 ORTHO05D006848 2.9e-60 235.7 306 45.4
CSS0036954 Camellia sinensis var. sinensis HOM05D005513 ORTHO05D006848 1.1e-59 233.8 317 44.8
Nn7g37504 Nelumbo nucifera HOM05D005513 ORTHO05D006848 1.1e-59 233.8 318 45.3
Gohir.D10G121000 Gossypium hirsutum HOM05D005513 ORTHO05D006848 1.4e-59 233.4 317 44.8
Gorai.011G132900 Gossypium raimondii HOM05D005513 ORTHO05D006848 1.4e-59 233.4 317 44.8
Gohir.A10G146000 Gossypium hirsutum HOM05D005513 ORTHO05D006848 4.2e-59 231.9 317 44.5
CAN.G2107.3 Capsicum annuum HOM05D005513 ORTHO05D006848 9.4e-59 230.7 147 81.6
CAN.G575.78 Capsicum annuum HOM05D005513 ORTHO05D006848 9.4e-59 230.7 147 79.6
GSVIVG01038190001 Vitis vinifera HOM05D005513 ORTHO05D006848 1.2e-58 230.3 317 44.8
TWI38G0850 Tripterygium wilfordii HOM05D005513 ORTHO05D006848 1.6e-58 229.9 319 44.2
Manes.05G132000 Manihot esculenta HOM05D005513 ORTHO05D006848 2.7e-58 229.2 300 45.3
Oeu057533.3 Olea europaea HOM05D005513 ORTHO05D006848 2.7e-58 229.2 346 41.3
Potri.019G099100 Populus trichocarpa HOM05D005513 ORTHO05D006848 3.6e-58 228.8 300 45.7
Sabra19G0110200 Salix brachista HOM05D005513 ORTHO05D006848 7.9e-58 227.6 300 45.3
Ciclev10021262m.g Citrus clementina HOM05D005513 ORTHO05D006848 1.0e-57 227.3 317 43.8
Duzib151G0764 Durio zibethinus HOM05D005513 ORTHO05D006848 1.0e-57 227.3 309 45.3
Eucgr.G01603 Eucalyptus grandis HOM05D005513 ORTHO05D006848 1.4e-57 226.9 311 45.0
FAN23G0174 Fragaria x ananassa HOM05D005513 ORTHO05D006848 1.4e-57 226.9 317 44.2
Lalb_Chr16g0384361 Lupinus albus HOM05D005513 ORTHO05D006848 1.8e-57 226.5 317 42.6
Thecc.04G162400 Theobroma cacao HOM05D005513 ORTHO05D006848 1.8e-57 226.5 317 44.5
Ca_18624_v3 Cicer arietinum L. HOM05D005513 ORTHO05D006848 2.3e-57 226.1 317 43.2
TAR362G0948 Trochodendron aralioides HOM05D005513 ORTHO05D006848 3.0e-57 225.7 317 42.9
Prupe.7G267200 Prunus persica HOM05D005513 ORTHO05D006848 5.1e-57 224.9 317 44.2
Medtr4g087590 Medicago truncatula HOM05D005513 ORTHO05D006848 6.7e-57 224.6 317 43.2
Atru.chr4.1482 Acer truncatum HOM05D005513 ORTHO05D006848 8.8e-57 224.2 310 43.9
vmacro15699 Vaccinium macrocarpon HOM05D005513 ORTHO05D006848 8.8e-57 224.2 328 43.6
CANSAT56G3287 Cannabis sativa HOM05D005513 ORTHO05D006848 1.1e-56 223.8 310 44.2
CsaV3_6G032350 Cucumis sativus L. HOM05D005513 ORTHO05D006848 1.1e-56 223.8 295 45.1
QL10p057731 Quercus lobata HOM05D005513 ORTHO05D006848 1.1e-56 223.8 299 45.2
Eucgr.L00024 Eucalyptus grandis HOM05D005513 ORTHO05D006848 1.5e-56 223.4 317 43.8
Solyc12g038820.1 Solanum lycopersicum HOM05D005513 ORTHO05D006848 1.9e-56 223.0 148 77.0
FAN26G1480 Fragaria x ananassa HOM05D005513 ORTHO05D006848 2.5e-56 222.6 317 43.5
FvH4_1g00490 Fragaria vesca HOM05D005513 ORTHO05D006848 3.3e-56 222.2 317 43.2
Sed0010820 Sechium edule HOM05D005513 ORTHO05D006848 3.3e-56 222.2 306 44.1
Cpa.g.sc343.3 Carica papaya HOM05D005513 ORTHO05D006848 7.4e-56 221.1 300 44.3
RcHm_v2.0_Chr2g0085091 Rosa chinensis HOM05D005513 ORTHO05D006848 7.4e-56 221.1 317 44.2
Lj4g0013603 Lotus japonicus HOM05D005513 ORTHO05D006848 9.7e-56 220.7 317 42.6
Glyma.07G206300 Glycine max HOM05D005513 ORTHO05D006848 1.3e-55 220.3 316 42.7
Cfa015273 Carpinus fangiana HOM05D005513 ORTHO05D006848 1.7e-55 219.9 317 43.5
CAN.G181.20 Capsicum annuum HOM05D005513 ORTHO05D006848 2.8e-55 219.2 145 78.6
Sed0015185 Sechium edule HOM05D005513 ORTHO05D006848 2.8e-55 219.2 306 43.8
CiPaw.01G170000 Carya illinoinensis HOM05D005513 ORTHO05D006848 1.8e-54 216.5 307 43.3
PGR042G2305 Punica granatum HOM05D005513 ORTHO05D006848 4.1e-54 215.3 318 42.1
Glyma.02G138700 Glycine max HOM05D005513 ORTHO05D006848 9.1e-54 214.2 311 41.5
Dinv33223 Davidia involucrata HOM05D005513 ORTHO05D006848 4.5e-53 211.8 122 84.4
SGA_v2.0_scaffold122G33215 Striga asiatica HOM05D005513 ORTHO05D006848 5.9e-53 211.5 139 75.5
HanXRQChr10g0285921 Helianthus annuus HOM05D005513 ORTHO05D006848 7.7e-53 211.1 316 41.8
FAN28G1408 Fragaria x ananassa HOM05D005513 ORTHO05D006848 1.0e-52 210.7 337 40.7
PSO675G7310 Papaver somniferum HOM05D005513 ORTHO05D006848 1.0e-52 210.7 320 41.9
RhsimUnG0015400 Rhododendron simsii HOM05D005513 ORTHO05D006848 3.8e-52 208.8 351 40.7
Os08g0542600 Oryza sativa ssp. japonica HOM05D005513 ORTHO05D006848 5.0e-52 208.4 308 40.3
PSO541G5416 Papaver somniferum HOM05D005513 ORTHO05D006848 1.1e-51 207.2 320 41.6
Atru.chr4.1511 Acer truncatum HOM05D005587 ORTHO05D007287 2.5e-51 206.1 301 42.5
Lsat_1_v5_gn_2_40261 Lactuca sativa HOM05D005513 ORTHO05D006848 1.2e-50 203.8 339 39.5
COL.COLO4_08197 Corchorus olitorius HOM05D005513 ORTHO05D006848 2.1e-50 203.0 147 72.1
Hund12358 Selenicereus undatus HOM05D005513 ORTHO05D006848 7.9e-50 201.1 300 41.0
TPR.G23516 Trifolium pratense HOM05D005513 ORTHO05D006848 7.9e-50 201.1 145 71.7
HPP92_011686 Vanilla planifolia HOM05D005513 ORTHO05D006848 7.9e-50 201.1 300 41.3
HPP92_011691 Vanilla planifolia HOM05D005513 ORTHO05D006848 7.9e-50 201.1 300 41.3
ATR0743G005 Amborella trichopoda HOM05D005513 ORTHO05D006848 1.0e-49 200.7 300 40.3
Rhsim02G0085900 Rhododendron simsii HOM05D005513 ORTHO05D006848 1.0e-49 200.7 369 38.8
Ca_18630_v3 Cicer arietinum L. HOM05D005513 ORTHO05D006848 1.8e-49 199.9 141 73.0
CSS0028849 Camellia sinensis var. sinensis HOM05D005513 ORTHO05D006848 2.3e-49 199.5 148 68.9
Lj6A199G41 Lonicera japonica HOM05D005513 ORTHO05D006848 3.9e-49 198.7 286 45.5
Phvul.003G059600 Phaseolus vulgaris HOM05D005513 ORTHO05D006848 3.9e-49 198.7 137 73.7
QL10p057421 Quercus lobata HOM05D005513 ORTHO05D006848 8.8e-49 197.6 146 71.2
Atru.BG.100.p Acer truncatum HOM05D005513 ORTHO05D006848 3.3e-48 195.7 146 67.8
VMungo0251G3259 Vigna mungo HOM05D005513 ORTHO05D006848 3.3e-48 195.7 122 77.9
THA.LOC104801693 Tarenaya hassleriana HOM05D005513 ORTHO05D006848 5.7e-48 194.9 300 39.0
Haze_01354 Corylus avellana HOM05D005513 ORTHO05D006848 9.7e-48 194.1 233 49.4
Aqoxy2G04162 Aquilegia oxysepala HOM05D005513 ORTHO05D006848 2.2e-47 193.0 147 66.7
arahy.Tifrunner.gnm1.ann1.GWB5D5 Arachis hypogaea HOM05D005513 ORTHO05D006848 2.2e-47 193.0 137 71.5
arahy.Tifrunner.gnm1.ann1.GC3WT6 Arachis hypogaea HOM05D005513 ORTHO05D006848 2.8e-47 192.6 137 71.5
CAN.G2075.13 Capsicum annuum HOM05D005513 ORTHO05D006848 2.8e-47 192.6 123 82.1
Psat7g119320 Pisum sativum HOM05D005513 ORTHO05D006848 3.7e-47 192.2 145 68.3
Sc19g0006410 Simmondsia chinensis HOM05D005513 ORTHO05D006848 1.2e-45 187.2 154 63.6
AUR62021707 Chenopodium quinoa HOM05D005513 ORTHO05D006848 3.4e-45 185.7 147 64.6
Zm00001eb037350 Zea mays HOM05D005513 ORTHO05D006848 4.5e-45 185.3 146 60.3
Aa31LG3G16700 Aethionema arabicum HOM05D005513 ORTHO05D006848 5.9e-45 184.9 299 36.5
EL10Ac3g06111 Beta vulgaris HOM05D005513 ORTHO05D006848 5.9e-45 184.9 147 63.9
AUR62002417 Chenopodium quinoa HOM05D005513 ORTHO05D006848 1.0e-44 184.1 147 63.9
MD15G1148400 Malus domestica HOM05D005513 ORTHO05D006848 1.0e-44 184.1 147 66.0
Nitab4.5_0002604g0050 Nicotiana tabacum HOM05D005513 ORTHO05D006848 2.9e-44 182.6 141 70.2
ECA238G0802 Erigeron canadensis HOM05D005513 ORTHO05D006848 8.5e-44 181.0 283 40.6
AUR62023772 Chenopodium quinoa HOM05D005513 ORTHO05D006848 2.5e-43 179.5 147 63.3
Cc00_g04390 Coffea canephora HOM05D005513 ORTHO05D006848 5.5e-43 178.3 117 70.9
Nitab4.5_0000241g0250 Nicotiana tabacum HOM05D005513 ORTHO05D006848 7.2e-43 177.9 118 78.8
Lj6A58T48 Lonicera japonica HOM05D005513 ORTHO05D006848 6.7e-41 171.4 112 77.7
Thhalv10014198m.g Eutrema salsugineum HOM05D005513 ORTHO05D006848 4.4e-40 168.7 176 51.7
CARHR202830 Cardamine hirsuta HOM05D005513 ORTHO05D006848 2.2e-39 166.4 300 34.7
MELO3C011447.2 Cucumis melo HOM05D005513 ORTHO05D006848 2.2e-39 166.4 106 77.4
BcaB05g21485 Brassica carinata HOM05D005513 ORTHO05D006848 4.8e-39 165.2 196 46.9
A02p00500 Brassica napus HOM05D005513 ORTHO05D006848 4.8e-39 165.2 177 51.4
C02p04480 Brassica napus HOM05D005513 ORTHO05D006848 4.8e-39 165.2 196 46.9
CAN.G1703.15 Capsicum annuum HOM05D005513 ORTHO05D006848 4.8e-39 165.2 91 89.0
AL6G20970 Arabidopsis lyrata HOM05D005513 ORTHO05D006848 1.1e-38 164.1 137 59.9
BraA02t05034Z Brassica rapa HOM05D005513 ORTHO05D006848 1.1e-38 164.1 177 50.3
BolC2t06408H Brassica oleracea HOM05D005513 ORTHO05D006848 1.4e-38 163.7 196 46.4
Sp6g32980 Schrenkiella parvula HOM05D005513 ORTHO05D006848 1.4e-38 163.7 145 56.6
SEGI_26385 Sequoiadendron giganteum HOM05D005513 ORTHO05D006848 3.1e-38 162.5 122 59.8
Carub.0006s0894 Capsella rubella HOM05D005513 ORTHO05D006848 7.0e-38 161.4 151 57.0
AT5G10460 Arabidopsis thaliana HOM05D005513 ORTHO05D006848 1.0e-36 157.5 137 58.4
Medtr4g087600 Medicago truncatula HOM05D005513 ORTHO05D006848 4.7e-34 148.7 102 70.6
SMO119G0305 Selaginella moellendorffii HOM05D005513 ORTHO05D006848 6.1e-34 148.3 302 31.5
CAN.G12630.1 Capsicum annuum HOM05D005513 ORTHO05D006848 8.0e-34 147.9 79 91.1
BcaC03g13313 Brassica carinata HOM05D005513 ORTHO05D006848 1.0e-33 147.5 151 54.3
ClCG08G010170 Citrullus lanatus HOM05D005513 ORTHO05D006848 8.2e-31 137.9 307 33.6
SHI25989 Sapria himalayana HOM05D000105 ORTHO05D000023 2.7e-26 122.9 143 50.3
Lj6C203G2 Lonicera japonica HOM05D005513 ORTHO05D006848 2.7e-21 106.3 77 72.7
MCO04G248 Micromonas commoda HOM05D005513 ORTHO05D006848 5.5e-19 98.6 138 43.5
RcHm_v2.0_Chr2g0085051 Rosa chinensis HOM05D005513 ORTHO05D343180 2.1e-18 96.7 85 60.0
Cre14.g609300 Chlamydomonas reinhardtii HOM05D005513 ORTHO05D006848 2.8e-15 86.3 87 48.3
DCAR_005450 Daucus carota HOM05D005513 ORTHO05D006848 6.3e-15 85.1 209 31.1
Lj6A58T47 Lonicera japonica HOM05D005513 ORTHO05D006848 1.1e-14 84.3 79 59.5
Gorai.004G148900 Gossypium raimondii HOM05D005513 ORTHO05D006848 1.2e-13 80.9 68 61.8
PRCOL_00005454 Prasinoderma coloniale HOM05D005513 ORTHO05D006848 1.6e-13 80.5 126 43.7
EL10Ac7g16782 Beta vulgaris HOM05D005513 ORTHO05D006848 6.6e-12 75.1 65 61.5
SHI25987 Sapria himalayana HOM05D005513 ORTHO05D006848 1.7e-07 60.5 39 64.1


User provided reference genes

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