Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G156.6 Capsicum annuum HOM05D004473 ORTHO05D005652 6.3e-82 307.4 154 100.0
CAN.G939.10 Capsicum annuum HOM05D004473 ORTHO05D005652 5.6e-38 161.4 121 69.4
PGSC0003DMG400041047 Solanum tuberosum HOM05D004473 ORTHO05D005652 9.5e-38 160.6 121 68.6
Solyc00g500048.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 2.1e-37 159.5 122 68.0
Solyc00g500131.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 2.1e-37 159.5 122 68.0
Solyc00g500201.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 2.1e-37 159.5 122 68.0
Solyc00g500295.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 2.1e-37 159.5 122 68.0
Solyc00g500330.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 2.1e-37 159.5 122 68.0
Sopen01g008040 Solanum pennellii HOM05D004473 ORTHO05D005652 2.1e-37 159.5 121 68.6
Nitab4.5_0011099g0050 Nicotiana tabacum HOM05D004473 ORTHO05D005652 5.8e-35 151.4 117 68.4
CAN.G85.6 Capsicum annuum HOM05D004473 ORTHO05D005652 3.7e-34 148.7 106 73.6
Peaxi162Scf00211g00223 Petunia axillaris HOM05D004473 ORTHO05D005652 6.4e-34 147.9 106 72.6
CAN.G100.39 Capsicum annuum HOM05D004473 ORTHO05D005652 8.4e-34 147.5 106 71.7
Hma1.2p1_4210F.1_g338470 Hydrangea macrophylla HOM05D004473 ORTHO05D005652 2.4e-33 146.0 128 59.4
DCAR_032465 Daucus carota HOM05D004473 ORTHO05D005652 9.2e-33 144.1 121 62.8
Hund29400 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.1e-32 142.9 122 59.0
Hund29926 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.1e-32 142.9 128 56.2
Hund30056 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.1e-32 142.9 122 59.0
EL10As2g23210 Beta vulgaris HOM05D004473 ORTHO05D005652 3.5e-32 142.1 121 57.9
Hund29000 Selenicereus undatus HOM05D004473 ORTHO05D005652 6.0e-32 141.4 121 57.9
Hund29659 Selenicereus undatus HOM05D004473 ORTHO05D005652 6.0e-32 141.4 121 57.9
Hund30352 Selenicereus undatus HOM05D004473 ORTHO05D005652 6.0e-32 141.4 121 57.9
Hund25918 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.3e-31 139.4 121 57.0
Hund28272 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.3e-31 139.4 121 57.0
CAN.G575.33 Capsicum annuum HOM05D004473 ORTHO05D000001 1.5e-30 136.7 107 68.2
HanXRQChr00c0368g0574161 Helianthus annuus HOM05D004473 ORTHO05D005652 1.5e-30 136.7 121 56.2
HanXRQCPg0579741 Helianthus annuus HOM05D004473 ORTHO05D005652 1.5e-30 136.7 121 56.2
Hund27810 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.9e-30 136.3 114 58.8
SalBow1G8010 Salvia bowleyana HOM05D004473 ORTHO05D005652 3.3e-30 135.6 132 53.8
Lsat_1_v5_gn_7_76981 Lactuca sativa HOM05D004473 ORTHO05D005652 7.3e-30 134.4 121 55.4
Lalb_Chr07g0191541 Lupinus albus HOM05D004473 ORTHO05D005652 1.2e-29 133.7 121 54.5
ScUNg0001290 Simmondsia chinensis HOM05D004473 ORTHO05D005652 1.6e-29 133.3 121 55.4
Lj2P1238T61 Lonicera japonica HOM05D004473 ORTHO05D005652 8.1e-29 131.0 121 57.0
Lj2P1239T154 Lonicera japonica HOM05D004473 ORTHO05D005652 8.1e-29 131.0 121 57.0
Medtr3g035685 Medicago truncatula HOM05D004473 ORTHO05D005652 3.1e-28 129.0 121 55.4
RcHm_v2.0_CPg0502521 Rosa chinensis HOM05D004473 ORTHO05D005652 5.2e-28 128.3 128 53.1
Sed0024057 Sechium edule HOM05D004473 ORTHO05D005652 5.2e-28 128.3 121 55.4
Medtr7g021760 Medicago truncatula HOM05D004473 ORTHO05D005652 1.2e-27 127.1 118 55.9
Potri.013G138201 Populus trichocarpa HOM05D004473 ORTHO05D005652 2.0e-27 126.3 123 52.0
Sed0017792 Sechium edule HOM05D004473 ORTHO05D005652 2.0e-27 126.3 121 54.5
Gohir.A04G039120 Gossypium hirsutum HOM05D004473 ORTHO05D005652 2.6e-27 125.9 121 53.7
Medtr0002s0390 Medicago truncatula HOM05D004473 ORTHO05D005652 3.4e-27 125.6 119 54.6
GSVIVG01022885001 Vitis vinifera HOM05D004473 ORTHO05D005652 5.8e-27 124.8 110 58.2
PSO548G0076 Papaver somniferum HOM05D004473 ORTHO05D005652 7.6e-27 124.4 124 53.2
Migut.D01408 Erythranthe guttata HOM05D004473 ORTHO05D005652 1.3e-26 123.6 133 51.9
PGR111G0117 Punica granatum HOM05D004473 ORTHO05D005652 3.8e-26 122.1 132 47.7
CAN.G1738.12 Capsicum annuum HOM05D004473 ORTHO05D005652 4.9e-26 121.7 92 68.5
CAN.G219.14 Capsicum annuum HOM05D004473 ORTHO05D005652 8.4e-26 120.9 85 74.1
ATCG00040 Arabidopsis thaliana HOM05D004473 ORTHO05D005652 2.4e-25 119.4 121 52.1
TWI34G1450 Tripterygium wilfordii HOM05D004473 ORTHO05D005652 3.2e-25 119.0 121 52.1
Atru.chr6.757 Acer truncatum HOM05D004473 ORTHO05D005652 7.1e-25 117.9 121 52.1
Gohir.A08G095662 Gossypium hirsutum HOM05D004473 ORTHO05D005652 1.2e-24 117.1 117 53.0
BraSC25t45889Z Brassica rapa HOM05D004473 ORTHO05D005652 2.7e-24 115.9 145 46.2
C06p21390 Brassica napus HOM05D004473 ORTHO05D005652 4.6e-24 115.2 121 50.4
BolC2t10578H Brassica oleracea HOM05D004473 ORTHO05D005652 4.6e-24 115.2 121 50.4
BolSC37t60777H Brassica oleracea HOM05D004473 ORTHO05D005652 4.6e-24 115.2 121 50.4
BolSC45t60885H Brassica oleracea HOM05D004473 ORTHO05D005652 4.6e-24 115.2 121 50.4
BolSC45t60929H Brassica oleracea HOM05D004473 ORTHO05D005652 4.6e-24 115.2 121 50.4
BolSC46t60978H Brassica oleracea HOM05D004473 ORTHO05D005652 4.6e-24 115.2 121 50.4
BraSC143t45676Z Brassica rapa HOM05D004473 ORTHO05D005652 4.6e-24 115.2 121 50.4
BcaC05g28805 Brassica carinata HOM05D004473 ORTHO05D005652 6.0e-24 114.8 121 50.4
Hund10684 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.7e-23 113.2 105 58.1
Eucgr.D00924 Eucalyptus grandis HOM05D004473 ORTHO05D005652 3.9e-23 112.1 147 43.5
BolSC49t61206H Brassica oleracea HOM05D004473 ORTHO05D005652 3.3e-22 109.0 125 48.0
HanXRQChr00c0126g0571831 Helianthus annuus HOM05D004473 ORTHO05D005652 9.6e-22 107.5 93 54.8
HanXRQChr00c0125g0571751 Helianthus annuus HOM05D004473 ORTHO05D005652 3.6e-21 105.5 121 47.1
Medtr4g051280 Medicago truncatula HOM05D004473 ORTHO05D005652 3.6e-21 105.5 121 49.6
LjContig00489g0020099 Lotus japonicus HOM05D004473 ORTHO05D005652 4.8e-21 105.1 90 60.0
arahy.Tifrunner.gnm1.ann1.40BINF Arachis hypogaea HOM05D004473 ORTHO05D005652 6.2e-21 104.8 95 53.7
Peaxi162Scf00219g00048 Petunia axillaris HOM05D004473 ORTHO05D001250 1.1e-20 104.0 122 52.5
LjContig00318g0021272 Lotus japonicus HOM05D004473 ORTHO05D005652 1.5e-19 100.1 118 46.6
Gohir.1Z050066 Gossypium hirsutum HOM05D004473 ORTHO05D005652 2.0e-19 99.8 114 48.2
CAN.G130.4 Capsicum annuum HOM05D004473 ORTHO05D005652 2.6e-19 99.4 74 66.2
arahy.Tifrunner.gnm1.ann1.3DS1LI Arachis hypogaea HOM05D004473 ORTHO05D005652 3.4e-19 99.0 95 53.7
arahy.Tifrunner.gnm1.ann1.SGP77C Arachis hypogaea HOM05D004473 ORTHO05D005652 3.4e-19 99.0 95 53.7
Eucgr.D01147 Eucalyptus grandis HOM05D004473 ORTHO05D005652 4.4e-19 98.6 87 57.5
MELO3C027413.2 Cucumis melo HOM05D004473 ORTHO05D005652 7.6e-19 97.8 106 52.8
HanXRQChr11g0326581 Helianthus annuus HOM05D004473 ORTHO05D005652 7.6e-19 97.8 89 51.7
arahy.Tifrunner.gnm1.ann1.85ZYV6 Arachis hypogaea HOM05D004473 ORTHO05D005652 3.8e-18 95.5 149 38.9
Gohir.1Z049403 Gossypium hirsutum HOM05D004473 ORTHO05D005652 3.8e-18 95.5 92 51.1
TPR.G10220 Trifolium pratense HOM05D004473 ORTHO05D005652 3.8e-18 95.5 87 52.9
Gohir.A04G039150 Gossypium hirsutum HOM05D004473 ORTHO05D005652 1.9e-17 93.2 90 52.2
Hund10282 Selenicereus undatus HOM05D004473 ORTHO05D005652 9.3e-17 90.9 72 58.3
Hund29405 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.5e-14 82.8 124 42.7
Lsat_1_v5_gn_2_89740 Lactuca sativa HOM05D004473 ORTHO05D005652 3.3e-14 82.4 73 52.1
HanXRQChr16g0503951 Helianthus annuus HOM05D004473 ORTHO05D005652 8.1e-13 77.8 111 41.4
Duzib147G0859 Durio zibethinus HOM05D004473 ORTHO05D005696 3.1e-12 75.9 89 42.7
Gorai.002G165800 Gossypium raimondii HOM05D001387 ORTHO05D001250 3.1e-12 75.9 89 44.9
SGA_v2.0_scaffold479G52250 Striga asiatica HOM05D004473 ORTHO05D005652 1.2e-11 73.9 58 62.1
Thhalv10028154m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 2.0e-11 73.2 67 55.2
Gorai.003G179600 Gossypium raimondii HOM05D004473 ORTHO05D005652 4.5e-11 72.0 76 48.7
HanXRQChr00c0572g0575931 Helianthus annuus HOM05D004473 ORTHO05D005652 7.6e-11 71.2 93 44.1
GSVIVG01022429001 Vitis vinifera HOM05D004473 ORTHO05D005652 2.2e-10 69.7 44 70.5
TPR.G40775 Trifolium pratense HOM05D004473 ORTHO05D005652 4.9e-10 68.6 60 53.3
Gorai.005G171000 Gossypium raimondii HOM05D004473 ORTHO05D005652 1.9e-09 66.6 67 49.3
Hund04106 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.6e-08 63.5 146 34.2
Thhalv10001851m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 2.7e-08 62.8 72 45.8
GSVIVG01020677001 Vitis vinifera HOM05D004473 ORTHO05D005652 7.9e-08 61.2 47 59.6
AUR62037881 Chenopodium quinoa HOM05D001387 ORTHO05D001250 2.3e-07 59.7 45 60.0
Nn2g10392 Nelumbo nucifera HOM05D004473 ORTHO05D005652 4.3e-06 55.5 54 51.9
BraSC151t45687Z Brassica rapa HOM05D004473 ORTHO05D005652 5.6e-06 55.1 57 49.1


User provided reference genes

Program Settings