Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1557.1 Capsicum annuum HOM05D007397 ORTHO05D009336 5.9e-56 220.7 117 100.0
PGSC0003DMG400011470 Solanum tuberosum HOM05D007397 ORTHO05D009336 3.5e-48 194.9 118 89.8
Sopen04g005370 Solanum pennellii HOM05D007397 ORTHO05D009336 5.5e-46 187.6 120 85.0
Oeu044824.1 Olea europaea HOM05D007397 ORTHO05D009336 2.3e-44 182.2 116 79.3
Solyc04g010190.1 Solanum lycopersicum HOM05D007397 ORTHO05D009336 3.0e-44 181.8 118 84.7
MSTRG.7898 Avicennia marina HOM05D007397 ORTHO05D009336 2.0e-43 179.1 116 79.3
Migut.L01413 Erythranthe guttata HOM05D007397 ORTHO05D009336 2.6e-43 178.7 117 76.9
SGA_v2.0_scaffold165G38243 Striga asiatica HOM05D007397 ORTHO05D009336 2.6e-43 178.7 116 78.4
Glyma.06G097000 Glycine max HOM05D007397 ORTHO05D009336 1.3e-42 176.4 116 77.6
AUR62042666 Chenopodium quinoa HOM05D007397 ORTHO05D009336 6.3e-42 174.1 117 76.1
Haze_16973 Corylus avellana HOM05D007397 ORTHO05D009336 1.4e-41 172.9 115 76.5
MELO3C025487.2 Cucumis melo HOM05D007397 ORTHO05D009336 1.4e-41 172.9 116 75.9
Glyma.04G095200 Glycine max HOM05D007397 ORTHO05D009336 1.8e-41 172.6 116 75.0
EL10Ac2g03499 Beta vulgaris HOM05D007397 ORTHO05D009336 2.4e-41 172.2 119 75.6
Sc06g0001870 Simmondsia chinensis HOM05D007397 ORTHO05D009336 2.4e-41 172.2 115 73.0
FAN03G3257 Fragaria x ananassa HOM05D007397 ORTHO05D009336 3.1e-41 171.8 116 74.1
Cpa.g.sc1.304 Carica papaya HOM05D007397 ORTHO05D009336 4.1e-41 171.4 116 77.6
GSVIVG01032626001 Vitis vinifera HOM05D007397 ORTHO05D009336 5.4e-41 171.0 116 75.0
ClCG09G020320 Citrullus lanatus HOM05D007397 ORTHO05D009336 1.2e-40 169.9 115 75.7
Lj1P929T40 Lonicera japonica HOM05D007397 ORTHO05D009336 1.6e-40 169.5 116 73.3
Lj5g0010768 Lotus japonicus HOM05D007397 ORTHO05D009336 1.6e-40 169.5 115 73.9
Aqoxy5G01687 Aquilegia oxysepala HOM05D007397 ORTHO05D009336 3.5e-40 168.3 116 75.0
CANSAT64G2695 Cannabis sativa HOM05D007397 ORTHO05D009336 4.5e-40 167.9 115 72.2
Carub.0003s1170 Capsella rubella HOM05D007397 ORTHO05D009336 4.5e-40 167.9 116 73.3
DCAR_015250 Daucus carota HOM05D007397 ORTHO05D009336 5.9e-40 167.5 116 69.0
SalBow2G2387 Salvia bowleyana HOM05D007397 ORTHO05D009336 5.9e-40 167.5 117 73.5
CSS0023256 Camellia sinensis var. sinensis HOM05D007397 ORTHO05D009336 1.0e-39 166.8 116 72.4
Cfa001558 Carpinus fangiana HOM05D007397 ORTHO05D009336 1.0e-39 166.8 115 74.8
Medtr1g115740 Medicago truncatula HOM05D007397 ORTHO05D009336 1.3e-39 166.4 116 72.4
CARHR086880 Cardamine hirsuta HOM05D007397 ORTHO05D009336 2.3e-39 165.6 116 73.3
Thhalv10021616m.g Eutrema salsugineum HOM05D007397 ORTHO05D009336 2.3e-39 165.6 116 73.3
TAR320G0002 Trochodendron aralioides HOM05D007397 ORTHO05D009336 2.3e-39 165.6 116 72.4
HanXRQChr14g0460741 Helianthus annuus HOM05D007397 ORTHO05D009336 2.9e-39 165.2 115 73.9
Aa31sc153G60 Aethionema arabicum HOM05D007397 ORTHO05D009336 3.8e-39 164.9 116 74.1
Cc02_g08640 Coffea canephora HOM05D007397 ORTHO05D009336 5.0e-39 164.5 115 72.2
Nn2g12828 Nelumbo nucifera HOM05D007397 ORTHO05D009336 5.0e-39 164.5 116 71.6
AL3G23990 Arabidopsis lyrata HOM05D007397 ORTHO05D009336 8.6e-39 163.7 116 74.1
Rhsim09G0155900 Rhododendron simsii HOM05D007397 ORTHO05D009336 8.6e-39 163.7 115 70.4
Actinidia38224 Actinidia chinensis HOM05D007397 ORTHO05D009336 1.9e-38 162.5 110 74.5
CiPaw.01G279900 Carya illinoinensis HOM05D007397 ORTHO05D009336 2.5e-38 162.2 115 72.2
Ca_11323_v3 Cicer arietinum L. HOM05D007397 ORTHO05D009336 2.5e-38 162.2 115 74.8
Phvul.009G036400 Phaseolus vulgaris HOM05D007397 ORTHO05D009336 2.5e-38 162.2 116 72.4
TWI38G1005 Tripterygium wilfordii HOM05D007397 ORTHO05D009336 2.5e-38 162.2 116 73.3
FAN01G1406 Fragaria x ananassa HOM05D007397 ORTHO05D009336 3.3e-38 161.8 116 70.7
FAN01G1537 Fragaria x ananassa HOM05D007397 ORTHO05D009336 3.3e-38 161.8 116 70.7
Gohir.D10G218000 Gossypium hirsutum HOM05D007397 ORTHO05D009336 3.3e-38 161.8 114 70.2
Thecc.10G062300 Theobroma cacao HOM05D007397 ORTHO05D009336 4.2e-38 161.4 118 72.0
Atru.chr12.591 Acer truncatum HOM05D007397 ORTHO05D009336 5.5e-38 161.0 118 70.3
AT3G12345 Arabidopsis thaliana HOM05D007397 ORTHO05D009336 7.2e-38 160.6 116 72.4
PGR142G1402 Punica granatum HOM05D007397 ORTHO05D009336 9.5e-38 160.2 118 69.5
Sabra08G0033900 Salix brachista HOM05D007397 ORTHO05D009336 1.6e-37 159.5 116 69.8
Sp3g10540 Schrenkiella parvula HOM05D007397 ORTHO05D009336 2.8e-37 158.7 116 69.0
VMungo1309G1572 Vigna mungo HOM05D007397 ORTHO05D009336 2.8e-37 158.7 116 71.6
Gorai.011G244600 Gossypium raimondii HOM05D007397 ORTHO05D009336 3.6e-37 158.3 115 69.6
MD07G1184800 Malus domestica HOM05D007397 ORTHO05D009336 3.6e-37 158.3 116 69.0
PSO384G5114 Papaver somniferum HOM05D007397 ORTHO05D009336 3.6e-37 158.3 118 68.6
Psat6g239080 Pisum sativum HOM05D007397 ORTHO05D009336 4.7e-37 157.9 115 68.7
Lalb_Chr06g0164111 Lupinus albus HOM05D007397 ORTHO05D009336 8.0e-37 157.1 114 72.8
Nitab4.5_0007221g0040 Nicotiana tabacum HOM05D007397 ORTHO05D009336 8.0e-37 157.1 90 87.8
Peaxi162Scf00135g00025 Petunia axillaris HOM05D007397 ORTHO05D009336 8.0e-37 157.1 89 87.6
MBI05_g32638_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 1.0e-36 156.8 115 69.6
Potri.008G047800 Populus trichocarpa HOM05D007397 ORTHO05D009336 1.4e-36 156.4 116 71.6
Gohir.A10G209700 Gossypium hirsutum HOM05D007397 ORTHO05D009336 1.8e-36 156.0 115 68.7
THA.LOC104827311 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 1.8e-36 156.0 116 70.7
RcHm_v2.0_Chr1g0365021 Rosa chinensis HOM05D007397 ORTHO05D009336 3.0e-36 155.2 116 68.1
BraA05t22502Z Brassica rapa HOM05D007397 ORTHO05D009336 4.0e-36 154.8 117 66.7
Hma1.2p1_0348F.1_g131665 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 4.0e-36 154.8 118 67.8
Hma1.2p1_0348F.1_g131670 Hydrangea macrophylla HOM05D007397 ORTHO05D009336 4.0e-36 154.8 118 67.8
CsaV3_5G026110 Cucumis sativus L. HOM05D007397 ORTHO05D009336 5.2e-36 154.5 110 74.5
THA.LOC104809886 Tarenaya hassleriana HOM05D007397 ORTHO05D009336 5.2e-36 154.5 115 70.4
TPR.G10388 Trifolium pratense HOM05D007397 ORTHO05D009336 5.2e-36 154.5 113 69.9
Potri.010G213600 Populus trichocarpa HOM05D007397 ORTHO05D009336 6.8e-36 154.1 116 69.8
A05p37050 Brassica napus HOM05D007397 ORTHO05D009336 1.2e-35 153.3 116 67.2
Sed0011140 Sechium edule HOM05D007397 ORTHO05D009336 1.2e-35 153.3 116 69.0
C05p55480 Brassica napus HOM05D007397 ORTHO05D009336 1.5e-35 152.9 116 66.4
BolC5t34214H Brassica oleracea HOM05D007397 ORTHO05D009336 1.5e-35 152.9 116 66.4
BcaC05g29269 Brassica carinata HOM05D007397 ORTHO05D009336 2.6e-35 152.1 116 65.5
PSO339G5749 Papaver somniferum HOM05D007397 ORTHO05D009336 2.6e-35 152.1 118 66.9
Prupe.2G224700 Prunus persica HOM05D007397 ORTHO05D009336 1.7e-34 149.4 116 67.2
QL08p057549 Quercus lobata HOM05D007397 ORTHO05D009336 2.8e-34 148.7 116 66.4
Manes.10G039600 Manihot esculenta HOM05D007397 ORTHO05D009336 3.7e-34 148.3 88 80.7
BcaB04g21083 Brassica carinata HOM05D007397 ORTHO05D009336 6.3e-34 147.5 122 63.1
BcaB04g21085 Brassica carinata HOM05D007397 ORTHO05D009336 6.3e-34 147.5 122 63.1
unitig_22.g6935 Utricularia gibba HOM05D007397 ORTHO05D009336 6.3e-34 147.5 116 68.1
Ciclev10034008m.g Citrus clementina HOM05D007397 ORTHO05D009336 1.4e-33 146.4 88 77.3
Duzib106G0993 Durio zibethinus HOM05D007397 ORTHO05D009336 2.4e-33 145.6 109 68.8
Dinv25942 Davidia involucrata HOM05D007397 ORTHO05D009336 4.1e-33 144.8 103 73.8
MBI05_g30757_MAGBIO Magnolia biondii HOM05D007397 ORTHO05D009336 5.4e-33 144.4 110 68.2
CDE02G3908 Ceratophyllum demersum HOM05D001333 ORTHO05D001208 4.5e-32 141.4 116 57.8
Lsat_1_v5_gn_2_115220 Lactuca sativa HOM05D005234 ORTHO05D006583 4.5e-32 141.4 111 66.7
COL.COLO4_37769 Corchorus olitorius HOM05D007397 ORTHO05D009336 5.9e-32 141.0 115 64.3
ATR0681G332 Amborella trichopoda HOM05D007397 ORTHO05D009336 1.3e-31 139.8 116 57.8
AUR62025539 Chenopodium quinoa HOM05D007397 ORTHO05D009336 3.8e-31 138.3 116 66.4
SEGI_38306 Sequoiadendron giganteum HOM05D007397 ORTHO05D009336 9.5e-30 133.7 117 58.1
FAN10G1155 Fragaria x ananassa HOM05D007397 ORTHO05D009336 1.6e-29 132.9 111 64.0
Mapoly0043s0078 Marchantia polymorpha HOM05D007397 ORTHO05D009336 6.8e-28 127.5 118 55.1
HPP92_025097 Vanilla planifolia HOM05D007397 ORTHO05D009336 1.5e-27 126.3 117 53.8
Os06g0484500 Oryza sativa ssp. japonica HOM05D007397 ORTHO05D009336 3.5e-24 115.2 90 60.0
SMO229G0021 Selaginella moellendorffii HOM05D007397 ORTHO05D009336 4.6e-24 114.8 133 48.9
Zm00001eb397310 Zea mays HOM05D007397 ORTHO05D009336 2.5e-22 109.0 110 51.8
ECA238G2043 Erigeron canadensis HOM05D005234 ORTHO05D006583 5.2e-20 101.3 83 65.1
AagrBONN_evm.TU.Sc2ySwM_368.51 Anthoceros agrestis HOM05D007397 ORTHO05D009336 9.8e-19 97.1 113 48.7
Nitab4.5_0006737g0020 Nicotiana tabacum HOM05D007397 ORTHO05D009336 9.8e-19 97.1 82 68.3
C03p57580 Brassica napus HOM05D007397 ORTHO05D009336 8.1e-13 77.4 113 42.5
Duzib114G0919 Durio zibethinus HOM05D007397 ORTHO05D009336 6.8e-12 74.3 66 60.6
BcaC03g17725 Brassica carinata HOM05D007397 ORTHO05D009336 1.2e-11 73.6 109 43.1
Cfa009156 Carpinus fangiana HOM05D007397 ORTHO05D009336 3.4e-11 72.0 62 62.9


User provided reference genes

Program Settings