Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G154.11 Capsicum annuum HOM05D004366 ORTHO05D005058 1.7e-70 269.2 141 100.0
Solyc01g010810.4 Solanum lycopersicum HOM05D004366 ORTHO05D005058 1.8e-30 136.3 130 58.5
Sopen01g006640 Solanum pennellii HOM05D004366 ORTHO05D005058 5.1e-30 134.8 130 57.7
PGSC0003DMG400006558 Solanum tuberosum HOM05D004366 ORTHO05D005058 6.7e-30 134.4 130 57.7
CAN.G473.145 Capsicum annuum HOM05D004366 ORTHO05D005058 1.5e-29 133.3 130 58.5
Nitab4.5_0005950g0010 Nicotiana tabacum HOM05D004366 ORTHO05D005058 2.5e-29 132.5 130 56.9
Peaxi162Scf00026g03112 Petunia axillaris HOM05D004366 ORTHO05D005058 4.8e-28 128.3 130 56.2
Nitab4.5_0000141g0240 Nicotiana tabacum HOM05D004366 ORTHO05D005058 6.3e-28 127.9 130 55.4
Gohir.D13G074000 Gossypium hirsutum HOM05D004366 ORTHO05D005058 9.1e-27 124.0 130 51.5
Gorai.013G084600 Gossypium raimondii HOM05D004366 ORTHO05D005058 1.5e-26 123.2 130 51.5
QL03p064520 Quercus lobata HOM05D004366 ORTHO05D005058 3.4e-26 122.1 130 51.5
Gohir.A13G073900 Gossypium hirsutum HOM05D004366 ORTHO05D005058 1.3e-25 120.2 130 50.8
Aa31LG4G11100 Aethionema arabicum HOM05D004366 ORTHO05D005058 2.9e-25 119.0 131 47.3
CiPaw.06G083500 Carya illinoinensis HOM05D004366 ORTHO05D005058 3.8e-25 118.6 130 50.0
Phvul.002G086500 Phaseolus vulgaris HOM05D004366 ORTHO05D005058 3.8e-25 118.6 131 49.6
CSS0003416 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 5.0e-25 118.2 130 52.3
CSS0021388 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 5.0e-25 118.2 130 52.3
Haze_12025 Corylus avellana HOM05D004366 ORTHO05D005058 5.0e-25 118.2 130 49.2
Thhalv10019150m.g Eutrema salsugineum HOM05D004366 ORTHO05D005058 5.0e-25 118.2 131 48.9
EL10Ac6g13190 Beta vulgaris HOM05D004366 ORTHO05D005058 6.5e-25 117.9 130 50.0
Actinidia31203 Actinidia chinensis HOM05D004366 ORTHO05D005058 1.1e-24 117.1 130 49.2
A07p31430 Brassica napus HOM05D004366 ORTHO05D005058 1.1e-24 117.1 131 48.1
Lalb_Chr04g0256161 Lupinus albus HOM05D004366 ORTHO05D005058 1.1e-24 117.1 131 49.6
Prupe.1G272700 Prunus persica HOM05D004366 ORTHO05D005058 1.1e-24 117.1 130 48.5
BraA07t30778Z Brassica rapa HOM05D004366 ORTHO05D005058 1.4e-24 116.7 131 47.3
A07p36060 Brassica napus HOM05D004366 ORTHO05D005058 1.9e-24 116.3 131 47.3
BraA07t31186Z Brassica rapa HOM05D004366 ORTHO05D005058 1.9e-24 116.3 131 47.3
Atru.chr11.1817 Acer truncatum HOM05D004366 ORTHO05D005058 2.5e-24 115.9 130 47.7
BolC6t38782H Brassica oleracea HOM05D004366 ORTHO05D005058 2.5e-24 115.9 131 47.3
Sc11g0001840 Simmondsia chinensis HOM05D004366 ORTHO05D005058 2.5e-24 115.9 130 49.2
Aa31sc15G10 Aethionema arabicum HOM05D004366 ORTHO05D005058 3.2e-24 115.5 131 46.6
BcaC08g46415 Brassica carinata HOM05D004366 ORTHO05D005058 3.2e-24 115.5 131 47.3
C06p43460 Brassica napus HOM05D004366 ORTHO05D005058 3.2e-24 115.5 131 47.3
BolC6t39421H Brassica oleracea HOM05D004366 ORTHO05D005058 3.2e-24 115.5 131 47.3
Glyma.01G045700 Glycine max HOM05D004366 ORTHO05D005058 3.2e-24 115.5 131 47.3
Sp5g24810 Schrenkiella parvula HOM05D004366 ORTHO05D005058 3.2e-24 115.5 131 47.3
TWI12G0004 Tripterygium wilfordii HOM05D004366 ORTHO05D005058 4.2e-24 115.2 128 49.2
CARHR062670 Cardamine hirsuta HOM05D004366 ORTHO05D005058 5.5e-24 114.8 131 46.6
MD16G1074700 Malus domestica HOM05D004366 ORTHO05D005058 5.5e-24 114.8 130 49.2
Rhsim12G0062000 Rhododendron simsii HOM05D004366 ORTHO05D005058 5.5e-24 114.8 130 49.2
C06p36720 Brassica napus HOM05D004366 ORTHO05D005058 7.2e-24 114.4 131 46.6
CANSAT25G1390 Cannabis sativa HOM05D004366 ORTHO05D005058 7.2e-24 114.4 130 50.8
Manes.01G186800 Manihot esculenta HOM05D004366 ORTHO05D005058 7.2e-24 114.4 130 49.2
Oeu028302.2 Olea europaea HOM05D004366 ORTHO05D005058 7.2e-24 114.4 130 48.5
BcaB03g14744 Brassica carinata HOM05D004366 ORTHO05D005058 9.4e-24 114.0 131 46.6
CANSAT54G1616 Cannabis sativa HOM05D004366 ORTHO05D005058 9.4e-24 114.0 130 50.8
PGR102G1003 Punica granatum HOM05D004366 ORTHO05D005058 9.4e-24 114.0 127 49.6
Hund05888 Selenicereus undatus HOM05D004366 ORTHO05D005058 9.4e-24 114.0 130 46.9
VMungo1215G0984 Vigna mungo HOM05D004366 ORTHO05D005058 9.4e-24 114.0 130 49.2
AUR62034912 Chenopodium quinoa HOM05D004366 ORTHO05D005058 1.6e-23 113.2 130 50.0
ClCG05G024360 Citrullus lanatus HOM05D004366 ORTHO05D005058 1.6e-23 113.2 130 47.7
Glyma.02G106000 Glycine max HOM05D004366 ORTHO05D005058 1.6e-23 113.2 131 46.6
TWI53G1314 Tripterygium wilfordii HOM05D004366 ORTHO05D005058 1.6e-23 113.2 128 50.0
AL2G28850 Arabidopsis lyrata HOM05D004366 ORTHO05D005058 2.7e-23 112.5 131 45.0
AUR62028793 Chenopodium quinoa HOM05D004366 ORTHO05D005058 2.7e-23 112.5 130 49.2
Lj3C1038T15 Lonicera japonica HOM05D004366 ORTHO05D005058 2.7e-23 112.5 130 49.2
RcHm_v2.0_Chr4g0440001 Rosa chinensis HOM05D004366 ORTHO05D005058 2.7e-23 112.5 130 49.2
AUR62005764 Chenopodium quinoa HOM05D004366 ORTHO05D005058 4.6e-23 111.7 128 49.2
ECA233G4070 Erigeron canadensis HOM05D004366 ORTHO05D005058 4.6e-23 111.7 130 50.0
Lj2g0005379 Lotus japonicus HOM05D004366 ORTHO05D005058 4.6e-23 111.7 131 46.6
Medtr8g463620 Medicago truncatula HOM05D004366 ORTHO05D005058 4.6e-23 111.7 131 45.8
Aqoxy3G03355 Aquilegia oxysepala HOM05D004366 ORTHO05D005058 6.1e-23 111.3 130 47.7
Medtr5g039690 Medicago truncatula HOM05D004366 ORTHO05D005058 6.1e-23 111.3 131 45.8
Sed0027317 Sechium edule HOM05D004366 ORTHO05D005058 6.1e-23 111.3 130 49.2
Carub.0002s1634 Capsella rubella HOM05D004366 ORTHO05D005058 7.9e-23 110.9 131 46.6
Ca_04775_v3 Cicer arietinum L. HOM05D004366 ORTHO05D005058 7.9e-23 110.9 131 45.8
Psat0s2341g0040 Pisum sativum HOM05D004366 ORTHO05D005058 7.9e-23 110.9 131 46.6
BcaC08g45875 Brassica carinata HOM05D004366 ORTHO05D005058 1.0e-22 110.5 125 47.2
Cpa.g.sc128.8 Carica papaya HOM05D004366 ORTHO05D005058 1.0e-22 110.5 130 47.7
COL.COLO4_22987 Corchorus olitorius HOM05D004366 ORTHO05D005058 1.0e-22 110.5 130 48.5
MELO3C012087.2 Cucumis melo HOM05D004366 ORTHO05D005058 1.0e-22 110.5 130 47.7
SalBow2G0488 Salvia bowleyana HOM05D004366 ORTHO05D005058 1.0e-22 110.5 131 46.6
Sp3g28750 Schrenkiella parvula HOM05D004366 ORTHO05D005058 1.0e-22 110.5 131 44.3
AT1G69680 Arabidopsis thaliana HOM05D004366 ORTHO05D005058 1.4e-22 110.2 131 46.6
Eucgr.B03429 Eucalyptus grandis HOM05D004366 ORTHO05D005058 1.4e-22 110.2 130 46.9
MD13G1073400 Malus domestica HOM05D004366 ORTHO05D005058 1.4e-22 110.2 130 46.2
AL7G43580 Arabidopsis lyrata HOM05D004366 ORTHO05D005058 2.3e-22 109.4 130 45.4
FvH4_4g31510 Fragaria vesca HOM05D004366 ORTHO05D005058 2.3e-22 109.4 130 49.2
FAN12G0862 Fragaria x ananassa HOM05D004366 ORTHO05D005058 2.3e-22 109.4 130 49.2
BcaB03g15490 Brassica carinata HOM05D004366 ORTHO05D005058 3.9e-22 108.6 131 45.0
CsaV3_5G032600 Cucumis sativus L. HOM05D004366 ORTHO05D005058 3.9e-22 108.6 130 47.7
AUR62026617 Chenopodium quinoa HOM05D004366 ORTHO05D005058 5.1e-22 108.2 130 48.5
THA.LOC104822115 Tarenaya hassleriana HOM05D004366 ORTHO05D005058 5.1e-22 108.2 130 44.6
Ciclev10032771m.g Citrus clementina HOM05D004366 ORTHO05D005058 6.7e-22 107.8 130 46.2
Cc11_g13140 Coffea canephora HOM05D004366 ORTHO05D005058 6.7e-22 107.8 131 47.3
arahy.Tifrunner.gnm1.ann1.QXP3RB Arachis hypogaea HOM05D004366 ORTHO05D005058 8.8e-22 107.5 131 41.2
CSS0022805 Camellia sinensis var. sinensis HOM05D004366 ORTHO05D005058 1.1e-21 107.1 130 48.5
FAN15G0746 Fragaria x ananassa HOM05D004366 ORTHO05D005058 1.1e-21 107.1 130 49.2
HanXRQChr08g0210471 Helianthus annuus HOM05D004366 ORTHO05D005058 1.1e-21 107.1 130 48.5
arahy.Tifrunner.gnm1.ann1.4LW61L Arachis hypogaea HOM05D004366 ORTHO05D005058 2.0e-21 106.3 131 40.5
HanXRQChr12g0362541 Helianthus annuus HOM05D004366 ORTHO05D005058 2.0e-21 106.3 130 47.7
Migut.L01306 Erythranthe guttata HOM05D004366 ORTHO05D005058 2.6e-21 105.9 130 46.2
FAN17G2550 Fragaria x ananassa HOM05D004366 ORTHO05D005058 2.6e-21 105.9 130 47.7
Nn4g23131 Nelumbo nucifera HOM05D004366 ORTHO05D005058 4.4e-21 105.1 130 46.2
Lsat_1_v5_gn_8_52741 Lactuca sativa HOM05D004366 ORTHO05D005058 5.7e-21 104.8 130 47.7
arahy.Tifrunner.gnm1.ann1.5V6A51 Arachis hypogaea HOM05D004366 ORTHO05D005058 7.4e-21 104.4 131 42.0
SalBow2G3183 Salvia bowleyana HOM05D004366 ORTHO05D005058 7.4e-21 104.4 136 44.9
FAN27G2895 Fragaria x ananassa HOM05D004366 ORTHO05D005058 9.7e-21 104.0 131 49.6
SGA_v2.0_scaffold20G09275 Striga asiatica HOM05D004366 ORTHO05D005058 9.7e-21 104.0 130 45.4
Thecc.02G350500 Theobroma cacao HOM05D004366 ORTHO05D005058 9.7e-21 104.0 83 62.7
unitig_22.g6909 Utricularia gibba HOM05D004366 ORTHO05D005058 2.8e-20 102.4 130 43.8
FAN24G0452 Fragaria x ananassa HOM05D004366 ORTHO05D005058 3.7e-20 102.1 130 47.7
PSO339G1196 Papaver somniferum HOM05D004366 ORTHO05D005058 3.7e-20 102.1 130 46.2
PSO384G0235 Papaver somniferum HOM05D004366 ORTHO05D005058 3.7e-20 102.1 130 46.2
FvH4_2g13310 Fragaria vesca HOM05D004366 ORTHO05D005058 3.1e-19 99.0 130 46.9
GSVIVG01020010001 Vitis vinifera HOM05D004366 ORTHO05D005058 4.1e-19 98.6 130 45.4
MBI02_g23682_MAGBIO Magnolia biondii HOM05D004366 ORTHO05D005058 6.9e-19 97.8 130 43.8
BcaC07g37109 Brassica carinata HOM05D004366 ORTHO05D005058 2.0e-18 96.3 99 52.5
C08p04780 Brassica napus HOM05D004366 ORTHO05D005058 4.5e-18 95.1 72 61.1
DCAR_027406 Daucus carota HOM05D002775 ORTHO05D005058 4.5e-18 95.1 71 70.4
BolC8t47277H Brassica oleracea HOM05D004366 ORTHO05D005058 8.5e-17 90.9 77 58.4
ATR0564G205 Amborella trichopoda HOM05D004366 ORTHO05D005058 1.1e-16 90.5 129 42.6
HPP92_006020 Vanilla planifolia HOM05D004366 ORTHO05D005058 1.9e-16 89.7 130 39.2
Zm00001eb080830 Zea mays HOM05D004366 ORTHO05D005058 1.9e-16 89.7 130 43.1
Os04g0459600 Oryza sativa ssp. japonica HOM05D004366 ORTHO05D005058 2.5e-16 89.4 130 42.3
Potri.013G049900 Populus trichocarpa HOM05D004366 ORTHO05D005058 2.5e-16 89.4 130 41.5
PSO675G4203 Papaver somniferum HOM05D004366 ORTHO05D005058 3.2e-16 89.0 130 42.3
TPR.G39101 Trifolium pratense HOM05D004366 ORTHO05D005058 4.2e-16 88.6 134 39.6
Sabra13G0046200 Salix brachista HOM05D004366 ORTHO05D005058 2.7e-15 85.9 130 40.0
FAN22G2022 Fragaria x ananassa HOM05D004366 ORTHO05D005058 6.7e-14 81.3 109 45.0
Hma1.2p1_0598F.1_g186660 Hydrangea macrophylla HOM05D004366 ORTHO05D005058 1.5e-13 80.1 115 42.6
Ah.03g135200 Amaranthus hybridus HOM05D004366 ORTHO05D005058 3.3e-13 79.0 130 39.2
vmacro01242 Vaccinium macrocarpon HOM05D004366 ORTHO05D005058 3.3e-13 79.0 130 41.5
vmacro01244 Vaccinium macrocarpon HOM05D004366 ORTHO05D005058 3.3e-13 79.0 130 41.5
SEGI_03925 Sequoiadendron giganteum HOM05D004366 ORTHO05D005058 9.7e-13 77.4 110 42.7
Duzib248G1524 Durio zibethinus HOM05D004366 ORTHO05D005058 1.3e-12 77.0 104 43.3
Oeu013622.3 Olea europaea HOM05D004366 ORTHO05D005058 1.8e-11 73.2 132 38.6
Lj6A789T49 Lonicera japonica HOM05D004366 ORTHO05D005058 4.1e-11 72.0 99 42.4
SGA_v2.0_scaffold53G19387 Striga asiatica HOM05D004366 ORTHO05D005058 5.9e-10 68.2 107 39.3
Aa31LG9G5650 Aethionema arabicum HOM05D004366 ORTHO05D005058 3.8e-09 65.5 151 29.8
Pp3c9_14930 Physcomitrium patens HOM05D004366 ORTHO05D005058 3.8e-09 65.5 108 37.0
AagrBONN_evm.TU.Sc2ySwM_362.1786 Anthoceros agrestis HOM05D004366 ORTHO05D005058 1.1e-08 63.9 52 59.6
AagrBONN_evm.TU.Sc2ySwM_344.5131 Anthoceros agrestis HOM05D004366 ORTHO05D005058 1.5e-08 63.5 52 59.6
arahy.Tifrunner.gnm1.ann1.D4KK35 Arachis hypogaea HOM05D004366 ORTHO05D005058 1.9e-08 63.2 140 32.9
Pp3c15_14240 Physcomitrium patens HOM05D004366 ORTHO05D005058 2.7e-07 59.3 49 61.2
SMO147G0050 Selaginella moellendorffii HOM05D004366 ORTHO05D005058 2.7e-07 59.3 109 33.9
PGSC0003DMG400015729 Solanum tuberosum HOM05D004366 ORTHO05D005058 3.6e-07 58.9 113 38.9
A08p04480 Brassica napus HOM05D004366 ORTHO05D005058 1.0e-06 57.4 72 40.3
PSO339G3282 Papaver somniferum HOM05D000073 ORTHO05D000033 1.0e-06 57.4 77 41.6
Atru.chr9.1643 Acer truncatum HOM05D004366 ORTHO05D005058 1.4e-06 57.0 43 60.5
Cfa008996 Carpinus fangiana HOM05D004366 ORTHO05D005058 2.3e-06 56.2 136 31.6


User provided reference genes

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