Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1534.2 Capsicum annuum HOM05D004486 ORTHO05D031952 4.1e-59 231.1 111 100.0
Solyc04g049720.4 Solanum lycopersicum HOM05D004486 ORTHO05D006329 5.4e-35 151.0 83 84.3
Sopen04g019990 Solanum pennellii HOM05D004486 ORTHO05D006329 5.4e-35 151.0 83 84.3
PGSC0003DMG400028998 Solanum tuberosum HOM05D004486 ORTHO05D006329 5.4e-35 151.0 83 84.3
Peaxi162Scf01024g00123 Petunia axillaris HOM05D004486 ORTHO05D006329 1.2e-34 149.8 83 84.3
CAN.G742.18 Capsicum annuum HOM05D004486 ORTHO05D006329 2.1e-34 149.1 83 83.1
MSTRG.361 Avicennia marina HOM05D004486 ORTHO05D006329 6.0e-34 147.5 83 81.9
Nitab4.5_0005262g0010 Nicotiana tabacum HOM05D004486 ORTHO05D006329 1.3e-33 146.4 83 83.1
Migut.F01788 Erythranthe guttata HOM05D004486 ORTHO05D006329 3.9e-33 144.8 83 80.7
Nn2g12957 Nelumbo nucifera HOM05D004486 ORTHO05D006329 6.7e-33 144.1 83 78.3
SalBow3G3918 Salvia bowleyana HOM05D004486 ORTHO05D006329 6.7e-33 144.1 83 79.5
Nitab4.5_0000561g0010 Nicotiana tabacum HOM05D004486 ORTHO05D006329 1.1e-32 143.3 83 80.7
Nitab4.5_0000830g0030 Nicotiana tabacum HOM05D004486 ORTHO05D006329 1.1e-32 143.3 83 80.7
Nitab4.5_0000830g0050 Nicotiana tabacum HOM05D004486 ORTHO05D006329 1.1e-32 143.3 83 81.9
SGA_v2.0_scaffold71G24033 Striga asiatica HOM05D004486 ORTHO05D006329 1.1e-32 143.3 83 80.7
CSS0008191 Camellia sinensis var. sinensis HOM05D004486 ORTHO05D006329 1.9e-32 142.5 83 78.3
CSS0049406 Camellia sinensis var. sinensis HOM05D004486 ORTHO05D006329 1.9e-32 142.5 83 78.3
Lj7A436T61 Lonicera japonica HOM05D004486 ORTHO05D006329 1.9e-32 142.5 83 75.9
Lj8A94T45 Lonicera japonica HOM05D004486 ORTHO05D006329 1.9e-32 142.5 83 75.9
CiPaw.01G277900 Carya illinoinensis HOM05D004486 ORTHO05D006329 3.3e-32 141.7 83 77.1
Cc09_g02360 Coffea canephora HOM05D004486 ORTHO05D006329 3.3e-32 141.7 83 77.1
MSTRG.8160 Avicennia marina HOM05D004486 ORTHO05D006329 4.3e-32 141.4 83 79.5
Peaxi162Scf01024g00121 Petunia axillaris HOM05D004486 ORTHO05D006329 4.3e-32 141.4 83 79.5
Potri.008G045900 Populus trichocarpa HOM05D004486 ORTHO05D006329 4.3e-32 141.4 83 79.5
Sabra08G0032200 Salix brachista HOM05D004486 ORTHO05D006329 4.3e-32 141.4 83 80.7
Sabra10G0166800 Salix brachista HOM05D004486 ORTHO05D006329 4.3e-32 141.4 83 80.7
Eucgr.J01127 Eucalyptus grandis HOM05D004486 ORTHO05D006329 5.6e-32 141.0 83 78.3
Prupe.2G220700 Prunus persica HOM05D004486 ORTHO05D006329 5.6e-32 141.0 83 78.3
CANSAT11G2341 Cannabis sativa HOM05D004486 ORTHO05D006329 7.4e-32 140.6 83 75.9
Dinv11819 Davidia involucrata HOM05D004486 ORTHO05D006329 7.4e-32 140.6 83 75.9
Potri.010G215700 Populus trichocarpa HOM05D004486 ORTHO05D006329 9.6e-32 140.2 83 79.5
MD07G1182000 Malus domestica HOM05D004486 ORTHO05D006329 1.3e-31 139.8 83 77.1
Haze_16953 Corylus avellana HOM05D004486 ORTHO05D006329 1.6e-31 139.4 83 75.9
Eucgr.J01128 Eucalyptus grandis HOM05D004486 ORTHO05D006329 1.6e-31 139.4 83 77.1
Sed0016157 Sechium edule HOM05D004486 ORTHO05D006329 1.6e-31 139.4 83 77.1
Hund19290 Selenicereus undatus HOM05D004486 ORTHO05D006329 1.6e-31 139.4 83 75.9
TWI38G2347 Tripterygium wilfordii HOM05D004486 ORTHO05D006329 1.6e-31 139.4 83 78.3
Duzib128G1554 Durio zibethinus HOM05D004486 ORTHO05D006329 2.8e-31 138.7 83 78.3
PGR044G2316 Punica granatum HOM05D004486 ORTHO05D006329 2.8e-31 138.7 83 77.1
vmacro07094 Vaccinium macrocarpon HOM05D004486 ORTHO05D006329 2.8e-31 138.7 83 75.9
Manes.18G142200 Manihot esculenta HOM05D004486 ORTHO05D006329 3.7e-31 138.3 83 75.9
Rhsim12G0129400 Rhododendron simsii HOM05D004486 ORTHO05D006329 3.7e-31 138.3 83 75.9
Ciclev10030974m.g Citrus clementina HOM05D004486 ORTHO05D006329 4.8e-31 137.9 83 74.7
FvH4_7g20511 Fragaria vesca HOM05D004486 ORTHO05D006329 4.8e-31 137.9 83 77.1
TAR369G0956 Trochodendron aralioides HOM05D004486 ORTHO05D006329 4.8e-31 137.9 83 75.9
FAN10G3892 Fragaria x ananassa HOM05D004486 ORTHO05D006329 6.2e-31 137.5 83 75.9
Lsat_1_v5_gn_8_21161 Lactuca sativa HOM05D004486 ORTHO05D006329 8.1e-31 137.1 83 73.5
CSS0021534 Camellia sinensis var. sinensis HOM05D004486 ORTHO05D006329 1.1e-30 136.7 83 74.7
Hma1.2p1_2685F.1_g326910 Hydrangea macrophylla HOM05D004486 ORTHO05D006329 1.1e-30 136.7 83 73.5
MD01G1114100 Malus domestica HOM05D004486 ORTHO05D006329 1.1e-30 136.7 83 75.9
Manes.18G141033 Manihot esculenta HOM05D004486 ORTHO05D006329 1.1e-30 136.7 83 74.7
Manes.18G141037 Manihot esculenta HOM05D004486 ORTHO05D006329 1.1e-30 136.7 83 74.7
EL10Ac2g03540 Beta vulgaris HOM05D004486 ORTHO05D006329 1.4e-30 136.3 83 73.5
Cfa001575 Carpinus fangiana HOM05D004486 ORTHO05D006329 1.4e-30 136.3 83 74.7
Duzib106G0308 Durio zibethinus HOM05D004486 ORTHO05D006329 1.4e-30 136.3 83 77.1
Gohir.A13G021200 Gossypium hirsutum HOM05D004486 ORTHO05D006329 1.4e-30 136.3 83 77.1
Gohir.D13G021700 Gossypium hirsutum HOM05D004486 ORTHO05D006329 1.4e-30 136.3 83 77.1
Gorai.013G024500 Gossypium raimondii HOM05D004486 ORTHO05D006329 1.4e-30 136.3 83 77.1
RcHm_v2.0_Chr1g0364401 Rosa chinensis HOM05D004486 ORTHO05D006329 1.8e-30 136.0 83 75.9
Thecc.10G065100 Theobroma cacao HOM05D004486 ORTHO05D006329 1.8e-30 136.0 83 75.9
Lalb_Chr21g0307511 Lupinus albus HOM05D004486 ORTHO05D006329 2.4e-30 135.6 83 74.7
unitig_60.g25720 Utricularia gibba HOM05D004486 ORTHO05D006329 2.4e-30 135.6 83 74.7
DCAR_006479 Daucus carota HOM05D004486 ORTHO05D006329 4.0e-30 134.8 83 72.3
FAN06G4941 Fragaria x ananassa HOM05D004486 ORTHO05D006329 4.0e-30 134.8 83 75.9
PSO339G6713 Papaver somniferum HOM05D004486 ORTHO05D006329 4.0e-30 134.8 83 77.1
PSO384G2310 Papaver somniferum HOM05D004486 ORTHO05D006329 4.0e-30 134.8 83 77.1
AUR62036016 Chenopodium quinoa HOM05D004486 ORTHO05D006329 5.3e-30 134.4 83 72.3
Atru.chr12.611 Acer truncatum HOM05D004486 ORTHO05D006329 6.9e-30 134.0 83 73.5
BcaC04g19110 Brassica carinata HOM05D004486 ORTHO05D006329 9.0e-30 133.7 84 76.2
A10p24750 Brassica napus HOM05D004486 ORTHO05D006329 9.0e-30 133.7 84 76.2
C09p63580 Brassica napus HOM05D004486 ORTHO05D006329 9.0e-30 133.7 84 76.2
BraA10t44538Z Brassica rapa HOM05D004486 ORTHO05D006329 9.0e-30 133.7 84 76.2
Phvul.007G005900 Phaseolus vulgaris HOM05D004486 ORTHO05D006329 9.0e-30 133.7 83 74.7
Sp6g30500 Schrenkiella parvula HOM05D004486 ORTHO05D006329 9.0e-30 133.7 84 76.2
VMungo0720G3071 Vigna mungo HOM05D004486 ORTHO05D006329 9.0e-30 133.7 83 74.7
FAN06G4255 Fragaria x ananassa HOM05D004486 ORTHO05D006329 1.2e-29 133.3 83 74.7
MBI05_g24466_MAGBIO Magnolia biondii HOM05D004486 ORTHO05D006329 1.2e-29 133.3 83 74.7
Aa31sc127G20 Aethionema arabicum HOM05D004486 ORTHO05D006329 1.5e-29 132.9 84 76.2
Ah.10g033110 Amaranthus hybridus HOM05D004486 ORTHO05D006329 1.5e-29 132.9 83 72.3
CsaV3_5G026050 Cucumis sativus L. HOM05D004486 ORTHO05D006329 1.5e-29 132.9 83 72.3
BcaNung01890 Brassica carinata HOM05D004486 ORTHO05D006329 2.0e-29 132.5 84 75.0
BolC9t59201H Brassica oleracea HOM05D004486 ORTHO05D006329 2.0e-29 132.5 84 75.0
THA.LOC104827314 Tarenaya hassleriana HOM05D004486 ORTHO05D006329 2.0e-29 132.5 84 76.2
TWI38G1612 Tripterygium wilfordii HOM05D004486 ORTHO05D006329 2.0e-29 132.5 83 74.7
Lj5g0008233 Lotus japonicus HOM05D004486 ORTHO05D006329 3.4e-29 131.7 83 72.3
QL08p057259 Quercus lobata HOM05D004486 ORTHO05D006329 3.4e-29 131.7 83 74.7
Actinidia03014 Actinidia chinensis HOM05D004486 ORTHO05D006329 4.5e-29 131.3 83 74.7
ClCG09G020360 Citrullus lanatus HOM05D004486 ORTHO05D006329 4.5e-29 131.3 83 72.3
CARHR199920 Cardamine hirsuta HOM05D004486 ORTHO05D006329 5.8e-29 131.0 84 75.0
AUR62027896 Chenopodium quinoa HOM05D004486 ORTHO05D006329 5.8e-29 131.0 83 71.1
MELO3C025494.2 Cucumis melo HOM05D004486 ORTHO05D006329 5.8e-29 131.0 83 72.3
AL6G24140 Arabidopsis lyrata HOM05D004486 ORTHO05D006329 9.9e-29 130.2 84 75.0
AT5G13520 Arabidopsis thaliana HOM05D004486 ORTHO05D006329 1.3e-28 129.8 84 75.0
HanXRQChr12g0367761 Helianthus annuus HOM05D004486 ORTHO05D006329 1.3e-28 129.8 83 69.9
Carub.0006s1168 Capsella rubella HOM05D004486 ORTHO05D006329 2.2e-28 129.0 84 75.0
Glyma.20G244100 Glycine max HOM05D004486 ORTHO05D006329 2.2e-28 129.0 83 71.1
Os03g0819100 Oryza sativa ssp. japonica HOM05D004486 ORTHO05D006329 2.2e-28 129.0 83 69.9
Aqoxy4G03158 Aquilegia oxysepala HOM05D004486 ORTHO05D006329 6.4e-28 127.5 83 71.1
TPR.G10423 Trifolium pratense HOM05D004486 ORTHO05D006329 8.4e-28 127.1 83 71.1
CDE04G1784 Ceratophyllum demersum HOM05D004486 ORTHO05D006329 1.1e-27 126.7 83 68.7
MELO3C027138.2 Cucumis melo HOM05D004486 ORTHO05D006329 1.1e-27 126.7 84 69.0
ECA233G4916 Erigeron canadensis HOM05D004486 ORTHO05D006329 1.1e-27 126.7 83 68.7
Thhalv10012982m.g Eutrema salsugineum HOM05D004486 ORTHO05D006329 1.1e-27 126.7 84 73.8
A02p02010 Brassica napus HOM05D004486 ORTHO05D006329 1.4e-27 126.3 84 72.6
FAN01G2088 Fragaria x ananassa HOM05D004486 ORTHO05D006329 1.4e-27 126.3 83 73.5
arahy.Tifrunner.gnm1.ann1.GKFC1I Arachis hypogaea HOM05D004486 ORTHO05D006329 1.9e-27 125.9 83 69.9
arahy.Tifrunner.gnm1.ann1.Q6727A Arachis hypogaea HOM05D004486 ORTHO05D006329 1.9e-27 125.9 83 69.9
BcaNung01146 Brassica carinata HOM05D004486 ORTHO05D006329 1.9e-27 125.9 84 71.4
BraA02t05173Z Brassica rapa HOM05D004486 ORTHO05D006329 1.9e-27 125.9 84 71.4
Zm00001eb062480 Zea mays HOM05D004486 ORTHO05D006329 3.2e-27 125.2 83 67.5
Psat6g239960 Pisum sativum HOM05D004486 ORTHO05D006329 5.5e-27 124.4 83 68.7
Medtr1g116230 Medicago truncatula HOM05D004486 ORTHO05D006329 7.1e-27 124.0 83 71.1
HPP92_015409 Vanilla planifolia HOM05D004486 ORTHO05D006329 7.1e-27 124.0 83 68.7
HPP92_026987 Vanilla planifolia HOM05D004486 ORTHO05D006329 7.1e-27 124.0 83 68.7
Ca_11379_v3 Cicer arietinum L. HOM05D004486 ORTHO05D006329 3.5e-26 121.7 83 69.9
VMungo0720G1168 Vigna mungo HOM05D004486 ORTHO05D006329 7.9e-26 120.6 83 67.5
Mapoly0007s0135 Marchantia polymorpha HOM05D004486 ORTHO05D006329 1.9e-24 115.9 83 66.3
SEGI_27690 Sequoiadendron giganteum HOM05D004486 ORTHO05D006329 1.9e-24 115.9 83 63.9
SEGI_01278 Sequoiadendron giganteum HOM05D004486 ORTHO05D006329 9.6e-24 113.6 83 66.3
AagrBONN_evm.TU.Sc2ySwM_362.2493 Anthoceros agrestis HOM05D004486 ORTHO05D006329 4.8e-23 111.3 83 60.2
SMO356G0749 Selaginella moellendorffii HOM05D004486 ORTHO05D006329 6.2e-23 110.9 83 61.4
ATR0594G057 Amborella trichopoda HOM05D004486 ORTHO05D006329 1.4e-22 109.8 84 60.7
CBR_g45218 Chara braunii HOM05D004486 ORTHO05D006329 4.2e-19 98.2 83 54.2
MCO01G623 Micromonas commoda HOM05D004486 ORTHO05D006329 3.9e-17 91.7 80 51.2
PRCOL_00006050 Prasinoderma coloniale HOM05D004486 ORTHO05D006329 4.3e-16 88.2 80 53.8
Cre13.g585900 Chlamydomonas reinhardtii HOM05D004486 ORTHO05D006329 1.8e-14 82.8 80 50.0
CAN.G1534.3 Capsicum annuum HOM05D004486 ORTHO05D031952 9.0e-14 80.5 51 72.5
MD01G1113900 Malus domestica HOM05D004486 ORTHO05D006329 9.0e-14 80.5 83 51.8
BcaNung06329 Brassica carinata HOM05D004486 ORTHO05D031952 1.2e-13 80.1 53 73.6
Oeu016149.1 Olea europaea HOM05D004486 ORTHO05D006329 3.6e-10 68.6 83 47.0
Cfa024826 Carpinus fangiana HOM05D004486 ORTHO05D006329 1.8e-09 66.2 82 40.2
GSVIVG01032649001 Vitis vinifera HOM05D004486 ORTHO05D006329 1.1e-08 63.5 83 45.8
AL6G23300 Arabidopsis lyrata HOM05D004486 ORTHO05D006329 2.8e-07 58.9 29 86.2
AL6G23330 Arabidopsis lyrata HOM05D004486 ORTHO05D006329 2.8e-07 58.9 29 86.2
C02p06220 Brassica napus HOM05D004486 ORTHO05D006329 3.7e-07 58.5 29 82.8
Actinidia38236 Actinidia chinensis HOM05D004486 ORTHO05D006329 4.8e-07 58.2 51 54.9


User provided reference genes

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