Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G153.18 Capsicum annuum HOM05D002617 ORTHO05D006076 7.1e-306 1053.1 541 100.0
Sopen03g009500 Solanum pennellii HOM05D002617 ORTHO05D000002 1.7e-251 872.5 542 81.7
Solyc03g045060.3 Solanum lycopersicum HOM05D002617 ORTHO05D006076 1.2e-244 849.7 542 80.1
Nitab4.5_0003461g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 5.2e-240 834.3 539 78.8
Nitab4.5_0004487g0050 Nicotiana tabacum HOM05D002617 ORTHO05D006076 4.4e-231 804.7 547 78.2
Peaxi162Scf00479g00121 Petunia axillaris HOM05D002617 ORTHO05D006076 1.9e-229 799.3 544 76.3
Oeu032874.2 Olea europaea HOM05D002617 ORTHO05D006076 4.4e-154 548.9 533 55.5
Dinv34860 Davidia involucrata HOM05D002617 ORTHO05D006076 9.1e-152 541.2 535 54.8
Cfa007960 Carpinus fangiana HOM05D002617 ORTHO05D009035 1.9e-149 533.5 556 53.6
Hma1.2p1_0550F.1_g177160 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 3.2e-149 532.7 545 53.6
CiPaw.03G005500 Carya illinoinensis HOM05D002617 ORTHO05D006076 5.5e-149 531.9 453 60.5
Cc07_g05010 Coffea canephora HOM05D002617 ORTHO05D006076 1.4e-147 527.3 453 61.8
Actinidia10244 Actinidia chinensis HOM05D002617 ORTHO05D006076 3.0e-147 526.2 539 54.2
MSTRG.23826 Avicennia marina HOM05D002617 ORTHO05D006076 8.8e-147 524.6 532 54.1
Lj4A130T19 Lonicera japonica HOM05D002617 ORTHO05D006076 7.0e-144 515.0 557 51.3
TAR629G1560 Trochodendron aralioides HOM05D002617 ORTHO05D006076 2.3e-142 510.0 549 51.2
DCAR_026269 Daucus carota HOM05D002617 ORTHO05D006076 2.5e-141 506.5 446 56.3
Hma1.2p1_0136F.1_g062020 Hydrangea macrophylla HOM05D002617 ORTHO05D006076 3.6e-140 502.7 425 60.5
Haze_14109 Corylus avellana HOM05D002617 ORTHO05D006076 6.1e-140 501.9 531 51.2
QL02p053118 Quercus lobata HOM05D002617 ORTHO05D006076 4.0e-139 499.2 543 51.9
TAR371G0417 Trochodendron aralioides HOM05D002617 ORTHO05D006076 3.5e-135 486.1 548 49.8
Migut.H00535 Erythranthe guttata HOM05D002617 ORTHO05D009035 5.9e-135 485.3 460 57.2
MD17G1073100 Malus domestica HOM05D002617 ORTHO05D006076 1.7e-134 483.8 427 59.5
MD09G1082600 Malus domestica HOM05D002617 ORTHO05D006076 2.5e-133 479.9 427 59.3
TWI74G0354 Tripterygium wilfordii HOM05D002617 ORTHO05D006076 1.2e-132 477.6 547 50.6
Prupe.3G241000 Prunus persica HOM05D002617 ORTHO05D006076 1.4e-131 474.2 441 56.0
COL.COLO4_16207 Corchorus olitorius HOM05D002617 ORTHO05D006076 2.3e-131 473.4 456 55.5
Potri.017G111300 Populus trichocarpa HOM05D002617 ORTHO05D006076 2.3e-131 473.4 441 56.5
Rhsim07G0215800 Rhododendron simsii HOM05D002617 ORTHO05D006076 4.0e-131 472.6 541 50.8
Actinidia19593 Actinidia chinensis HOM05D002617 ORTHO05D006076 9.8e-130 468.0 391 60.6
Potri.004G104400 Populus trichocarpa HOM05D002617 ORTHO05D006076 1.3e-129 467.6 446 56.1
Cpa.g.sc179.38 Carica papaya HOM05D002617 ORTHO05D006076 1.7e-129 467.2 393 59.5
Manes.02G066000 Manihot esculenta HOM05D002617 ORTHO05D006076 2.2e-129 466.8 444 56.3
Sabra04G0077200 Salix brachista HOM05D002617 ORTHO05D006076 2.2e-129 466.8 411 58.2
Atru.chr8.797 Acer truncatum HOM05D002617 ORTHO05D006076 1.8e-128 463.8 523 49.3
Duzib177G0627 Durio zibethinus HOM05D002617 ORTHO05D006076 9.2e-128 461.5 551 49.5
GSVIVG01036455001 Vitis vinifera HOM05D002617 ORTHO05D009035 2.7e-127 459.9 555 47.9
RcHm_v2.0_Chr2g0163421 Rosa chinensis HOM05D002617 ORTHO05D006076 3.5e-127 459.5 436 57.3
Ciclev10013582m.g Citrus clementina HOM05D002617 ORTHO05D009035 4.6e-127 459.1 446 54.7
Thecc.04G140400 Theobroma cacao HOM05D002617 ORTHO05D006076 6.6e-126 455.3 448 54.5
arahy.Tifrunner.gnm1.ann1.B4TVCG Arachis hypogaea HOM05D002617 ORTHO05D006076 2.5e-125 453.4 532 49.8
Gohir.D13G172300 Gossypium hirsutum HOM05D002617 ORTHO05D006076 4.3e-125 452.6 455 54.7
Gorai.013G188400 Gossypium raimondii HOM05D002617 ORTHO05D006076 4.3e-125 452.6 455 54.7
Glyma.13G047700 Glycine max HOM05D002617 ORTHO05D006076 7.3e-125 451.8 458 55.0
Haze_14111 Corylus avellana HOM05D002617 ORTHO05D006076 1.2e-124 451.1 608 43.6
arahy.Tifrunner.gnm1.ann1.LH188B Arachis hypogaea HOM05D002617 ORTHO05D006076 4.7e-124 449.1 530 49.6
Sabra17G0092600 Salix brachista HOM05D002617 ORTHO05D006076 6.2e-124 448.7 435 54.0
ECA232G1923 Erigeron canadensis HOM05D002617 ORTHO05D006076 1.1e-123 448.0 554 48.9
HanXRQChr14g0439661 Helianthus annuus HOM05D002617 ORTHO05D006076 3.1e-123 446.4 445 55.5
FAN14G4630 Fragaria x ananassa HOM05D002617 ORTHO05D006076 4.0e-123 446.0 395 58.5
Gohir.A13G161700 Gossypium hirsutum HOM05D002617 ORTHO05D006076 1.5e-122 444.1 455 54.1
Duzib235G0774 Durio zibethinus HOM05D002617 ORTHO05D006076 3.4e-122 443.0 556 48.2
ClCG11G005280 Citrullus lanatus HOM05D002617 ORTHO05D006076 5.8e-122 442.2 448 54.0
Eucgr.J01460 Eucalyptus grandis HOM05D002617 ORTHO05D006076 2.2e-121 440.3 540 48.3
FvH4_6g45480 Fragaria vesca HOM05D002617 ORTHO05D006076 1.4e-120 437.6 533 48.6
FAN02G4200 Fragaria x ananassa HOM05D002617 ORTHO05D006076 3.2e-120 436.4 551 47.4
VMungo0540G1549 Vigna mungo HOM05D002617 ORTHO05D006076 3.9e-118 429.5 451 53.7
MELO3C022066.2 Cucumis melo HOM05D002617 ORTHO05D006076 5.0e-118 429.1 444 53.8
Oeu043861.1 Olea europaea HOM05D002617 ORTHO05D006076 7.3e-117 425.2 649 42.7
HanXRQChr15g0489371 Helianthus annuus HOM05D002617 ORTHO05D006076 9.5e-117 424.9 382 58.9
Lalb_Chr21g0317971 Lupinus albus HOM05D002617 ORTHO05D006076 9.5e-117 424.9 438 53.7
CsaV3_5G039050 Cucumis sativus L. HOM05D002617 ORTHO05D006076 2.1e-116 423.7 444 53.2
SGA_v2.0_scaffold204G41654 Striga asiatica HOM05D002617 ORTHO05D006076 2.1e-116 423.7 449 52.6
Lalb_Chr02g0158361 Lupinus albus HOM05D002617 ORTHO05D006076 1.1e-115 421.4 540 47.2
Lj2g0025982 Lotus japonicus HOM05D002617 ORTHO05D006076 5.2e-115 419.1 467 51.6
Sc12g0007600 Simmondsia chinensis HOM05D002617 ORTHO05D006076 5.2e-115 419.1 442 51.1
Sed0011770 Sechium edule HOM05D002617 ORTHO05D006076 6.8e-115 418.7 433 53.8
Phvul.L003037 Phaseolus vulgaris HOM05D002617 ORTHO05D006076 1.7e-113 414.1 464 52.4
CANSAT64G0391 Cannabis sativa HOM05D002617 ORTHO05D006076 2.9e-113 413.3 539 45.8
Aqoxy3G00424 Aquilegia oxysepala HOM05D002617 ORTHO05D006076 5.4e-112 409.1 534 45.3
Ca_26958_v3 Cicer arietinum L. HOM05D002617 ORTHO05D006076 3.5e-111 406.4 453 53.0
Glyma.19G040800 Glycine max HOM05D002617 ORTHO05D006076 1.3e-110 404.4 458 51.7
Psat0s1160g0440 Pisum sativum HOM05D002617 ORTHO05D006076 2.3e-110 403.7 404 55.7
TPR.G9686 Trifolium pratense HOM05D002617 ORTHO05D006076 5.6e-109 399.1 347 59.7
EL10Ac5g11460 Beta vulgaris HOM05D002617 ORTHO05D006076 2.8e-108 396.7 400 52.2
unitig_736.g22255 Utricularia gibba HOM05D002617 ORTHO05D006076 4.7e-108 396.0 430 50.2
Medtr6g016990 Medicago truncatula HOM05D002617 ORTHO05D006076 3.1e-107 393.3 457 51.2
AUR62029876 Chenopodium quinoa HOM05D002617 ORTHO05D006076 2.6e-106 390.2 395 51.6
Lsat_1_v5_gn_4_175880 Lactuca sativa HOM05D002617 ORTHO05D006076 5.8e-106 389.0 410 54.1
PGR042G0381 Punica granatum HOM05D002617 ORTHO05D006076 3.8e-105 386.3 424 53.1
GSVIVG01011977001 Vitis vinifera HOM05D002617 ORTHO05D006076 4.9e-105 386.0 349 57.3
AUR62025837 Chenopodium quinoa HOM05D002617 ORTHO05D006076 9.2e-104 381.7 406 50.2
Aa31LG9G16990 Aethionema arabicum HOM05D002617 ORTHO05D006076 1.0e-102 378.3 394 51.3
Carub.0007s3725 Capsella rubella HOM05D002617 ORTHO05D006076 8.7e-102 375.2 420 51.0
ATR0598G067 Amborella trichopoda HOM05D002617 ORTHO05D006076 1.1e-101 374.8 456 48.2
THA.LOC104805556 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 3.3e-101 373.2 527 43.8
Thhalv10027714m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 4.3e-101 372.9 404 50.7
THA.LOC104822697 Tarenaya hassleriana HOM05D002617 ORTHO05D006076 7.3e-101 372.1 539 42.3
PSO017G2525 Papaver somniferum HOM05D002617 ORTHO05D006076 4.7e-100 369.4 485 44.1
AT5G38600 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 5.2e-99 365.9 541 42.7
PSO478G3319 Papaver somniferum HOM05D002617 ORTHO05D006076 5.2e-99 365.9 481 43.9
AL7G51930 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 1.2e-98 364.8 419 48.7
HPP92_011591 Vanilla planifolia HOM05D002617 ORTHO05D006076 1.5e-98 364.4 398 51.3
BcaB02g08001 Brassica carinata HOM05D002617 ORTHO05D006076 2.9e-97 360.1 437 46.0
BolC6t37041H Brassica oleracea HOM05D002617 ORTHO05D006076 1.9e-96 357.5 390 50.0
Sp7g03340 Schrenkiella parvula HOM05D002617 ORTHO05D006076 4.2e-96 356.3 401 48.4
BcaC08g44397 Brassica carinata HOM05D002617 ORTHO05D006076 7.1e-96 355.5 437 45.8
C06p18260 Brassica napus HOM05D000054 ORTHO05D006076 1.7e-94 350.9 519 42.4
A07p19790 Brassica napus HOM05D002617 ORTHO05D006076 3.0e-94 350.1 389 48.6
BraA07t29680Z Brassica rapa HOM05D002617 ORTHO05D006076 3.0e-94 350.1 389 48.6
Carub.0002s1348 Capsella rubella HOM05D002617 ORTHO05D006076 2.5e-93 347.1 408 48.8
vmacro04611 Vaccinium macrocarpon HOM05D002617 ORTHO05D006076 4.3e-93 346.3 541 42.1
AT1G67210 Arabidopsis thaliana HOM05D002617 ORTHO05D006076 2.8e-92 343.6 316 54.7
CARHR214050 Cardamine hirsuta HOM05D002617 ORTHO05D006076 2.8e-92 343.6 442 45.7
AL2G25720 Arabidopsis lyrata HOM05D002617 ORTHO05D006076 3.1e-91 340.1 366 51.1
Os06g0495700 Oryza sativa ssp. japonica HOM05D002617 ORTHO05D006076 2.0e-90 337.4 410 47.6
Sc11g0002970 Simmondsia chinensis HOM05D002617 ORTHO05D006076 3.4e-90 336.7 403 47.4
Aa31LG2G3590 Aethionema arabicum HOM05D002617 ORTHO05D006076 7.6e-90 335.5 453 43.3
CARHR059670 Cardamine hirsuta HOM05D002617 ORTHO05D006076 1.3e-89 334.7 415 46.3
A02p14070 Brassica napus HOM05D002617 ORTHO05D006076 3.0e-86 323.6 374 49.2
Zm00001eb182330 Zea mays HOM05D002617 ORTHO05D006076 5.1e-86 322.8 387 48.1
Sp5g22140 Schrenkiella parvula HOM05D002617 ORTHO05D006076 6.7e-86 322.4 366 47.5
BraA02t06470Z Brassica rapa HOM05D002617 ORTHO05D006076 1.9e-85 320.9 379 48.5
EL10Ac6g14526 Beta vulgaris HOM05D002617 ORTHO05D006076 5.6e-85 319.3 415 44.6
CSS0005448 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 1.3e-84 318.2 270 61.9
BcaC03g14816 Brassica carinata HOM05D002617 ORTHO05D006076 6.2e-84 315.8 377 48.0
C02p22680 Brassica napus HOM05D002617 ORTHO05D006076 6.2e-84 315.8 378 47.6
BolC2t08421H Brassica oleracea HOM05D002617 ORTHO05D006076 6.2e-84 315.8 377 48.0
DCAR_026709 Daucus carota HOM05D002617 ORTHO05D006076 6.2e-84 315.8 410 46.3
BcaB05g24247 Brassica carinata HOM05D002617 ORTHO05D006076 1.4e-83 314.7 388 47.4
Thhalv10018682m.g Eutrema salsugineum HOM05D002617 ORTHO05D006076 2.4e-83 313.9 365 48.5
Actinidia29638 Actinidia chinensis HOM05D002617 ORTHO05D006076 4.0e-83 313.2 358 49.2
Hund05776 Selenicereus undatus HOM05D002617 ORTHO05D006076 4.5e-82 309.7 395 45.8
PGSC0003DMG400003361 Solanum tuberosum HOM05D002617 ORTHO05D006076 4.5e-82 309.7 176 85.8
Ah.03g138020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 5.5e-80 302.8 389 45.2
Actinidia13004 Actinidia chinensis HOM05D002617 ORTHO05D006076 2.7e-79 300.4 352 48.9
AUR62007748 Chenopodium quinoa HOM05D002617 ORTHO05D006076 3.5e-79 300.1 418 44.0
AUR62002941 Chenopodium quinoa HOM05D002617 ORTHO05D006076 1.0e-78 298.5 414 44.4
FAN05G1346 Fragaria x ananassa HOM05D002617 ORTHO05D006076 6.7e-78 295.8 325 49.2
CSS0031641 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 2.5e-77 293.9 233 63.1
CDE03G0434 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 2.7e-71 273.9 274 55.8
Lsat_1_v5_gn_8_37540 Lactuca sativa HOM05D002617 ORTHO05D006076 6.3e-68 262.7 383 42.6
Dinv33921 Davidia involucrata HOM05D002617 ORTHO05D009035 1.8e-67 261.2 284 50.4
FAN09G0965 Fragaria x ananassa HOM05D002617 ORTHO05D006076 7.6e-66 255.8 355 43.7
Mapoly0126s0021 Marchantia polymorpha HOM05D002617 ORTHO05D006076 2.3e-62 244.2 382 39.5
SMO005G0008 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 9.7e-61 238.8 275 46.2
Dinv33922 Davidia involucrata HOM05D002617 ORTHO05D006076 3.3e-53 213.8 185 60.5
Lj3A1022T61 Lonicera japonica HOM05D002617 ORTHO05D006076 3.4e-50 203.8 256 47.3
SMO197G0066 Selaginella moellendorffii HOM05D002617 ORTHO05D006076 1.7e-49 201.4 275 41.5
SGA_v2.0_scaffold150G36614 Striga asiatica HOM05D002617 ORTHO05D006076 1.3e-44 185.3 595 29.4
Ah.02g115020 Amaranthus hybridus HOM05D002617 ORTHO05D006076 1.2e-42 178.7 406 32.0
CBR_g21963 Chara braunii HOM05D002617 ORTHO05D006076 7.2e-40 169.5 404 32.2
Nn8g40574 Nelumbo nucifera HOM05D002617 ORTHO05D006076 6.1e-39 166.4 171 49.1
Glyma.19G043901 Glycine max HOM05D002617 ORTHO05D006076 3.8e-33 147.1 203 47.3
AagrBONN_evm.TU.Sc2ySwM_344.4970 Anthoceros agrestis HOM05D002617 ORTHO05D006076 1.1e-27 129.0 204 37.3
SalBow1G4795 Salvia bowleyana HOM05D002617 ORTHO05D006076 3.1e-27 127.5 223 36.8
Pp3c8_12390 Physcomitrium patens HOM05D002617 ORTHO05D006076 7.7e-26 122.9 373 29.8
CDE04G2372 Ceratophyllum demersum HOM05D002617 ORTHO05D006076 3.6e-23 114.0 239 33.5
CSS0013506 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D006076 2.9e-17 94.4 222 32.4
Lsat_1_v5_gn_8_136421 Lactuca sativa HOM05D002617 ORTHO05D048373 1.4e-11 75.5 54 64.8
Actinidia19277 Actinidia chinensis HOM05D002617 ORTHO05D006076 2.7e-10 71.2 102 45.1
SEGI_27964 Sequoiadendron giganteum HOM05D002617 ORTHO05D006076 1.6e-07 62.0 50 56.0


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