Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1528.1 Capsicum annuum HOM05D005835 ORTHO05D007187 3.7e-97 358.2 182 100.0
Nitab4.5_0005230g0060 Nicotiana tabacum HOM05D005835 ORTHO05D007187 6.7e-83 310.8 182 86.3
Nitab4.5_0005535g0030 Nicotiana tabacum HOM05D005835 ORTHO05D007187 5.7e-82 307.8 182 85.7
PGSC0003DMG400029987 Solanum tuberosum HOM05D005835 ORTHO05D007187 5.7e-82 307.8 182 87.4
Solyc11g065270.2 Solanum lycopersicum HOM05D005835 ORTHO05D007187 2.2e-78 295.8 182 84.1
Sopen11g025020 Solanum pennellii HOM05D005835 ORTHO05D007187 2.9e-78 295.4 182 84.1
Peaxi162Scf00004g03718 Petunia axillaris HOM05D005835 ORTHO05D007187 1.2e-68 263.5 182 75.3
Hma1.2p1_2131F.1_g314730 Hydrangea macrophylla HOM05D005835 ORTHO05D007187 5.6e-61 238.0 182 65.4
Dinv39089 Davidia involucrata HOM05D005835 ORTHO05D007187 2.1e-60 236.1 174 67.8
Dinv21579 Davidia involucrata HOM05D005835 ORTHO05D007187 1.1e-56 223.8 175 63.4
DCAR_000844 Daucus carota HOM05D004805 ORTHO05D007187 5.4e-56 221.5 178 64.0
Rhsim07G0102800 Rhododendron simsii HOM05D005835 ORTHO05D007187 3.5e-55 218.8 170 63.5
MSTRG.12070 Avicennia marina HOM05D005835 ORTHO05D007187 5.9e-55 218.0 177 65.0
Oeu040228.1 Olea europaea HOM05D005835 ORTHO05D007187 1.0e-54 217.2 182 63.2
Nn1g01126 Nelumbo nucifera HOM05D005835 ORTHO05D007187 3.9e-54 215.3 177 62.7
TAR374G0447 Trochodendron aralioides HOM05D005835 ORTHO05D007187 3.9e-54 215.3 178 64.0
Nn1g01130 Nelumbo nucifera HOM05D005835 ORTHO05D007187 1.5e-53 213.4 177 62.1
SalBow6G1585 Salvia bowleyana HOM05D005835 ORTHO05D007187 3.1e-51 205.7 177 59.3
Migut.A00824 Erythranthe guttata HOM05D005835 ORTHO05D007187 8.9e-51 204.1 180 61.1
MBI04_g35668_MAGBIO Magnolia biondii HOM05D005835 ORTHO05D007187 1.2e-50 203.8 179 59.2
Migut.A00868 Erythranthe guttata HOM05D005835 ORTHO05D007187 1.5e-50 203.4 180 61.1
SGA_v2.0_scaffold120G32837 Striga asiatica HOM05D005835 ORTHO05D007187 1.5e-50 203.4 176 60.8
TAR375G0176 Trochodendron aralioides HOM05D005835 ORTHO05D007187 7.5e-50 201.1 171 61.4
Duzib068G0435 Durio zibethinus HOM05D005835 ORTHO05D007187 1.3e-49 200.3 178 58.4
FAN13G2021 Fragaria x ananassa HOM05D005835 ORTHO05D007187 2.2e-49 199.5 179 56.4
Prupe.4G260700 Prunus persica HOM05D005835 ORTHO05D007187 2.9e-49 199.1 178 55.6
SGA_v2.0_scaffold146G36171 Striga asiatica HOM05D005835 ORTHO05D007187 2.9e-49 199.1 180 58.3
Cc08_g13120 Coffea canephora HOM05D005835 ORTHO05D007187 3.2e-48 195.7 180 57.2
Eucgr.E01477 Eucalyptus grandis HOM05D005835 ORTHO05D007187 3.2e-48 195.7 177 58.8
TWI81G0081 Tripterygium wilfordii HOM05D005835 ORTHO05D007187 3.2e-48 195.7 177 57.6
CiPaw.12G105500 Carya illinoinensis HOM05D005835 ORTHO05D007187 4.1e-48 195.3 178 59.0
FAN08G1980 Fragaria x ananassa HOM05D005835 ORTHO05D007187 4.1e-48 195.3 179 55.9
MD04G1080500 Malus domestica HOM05D005835 ORTHO05D007187 9.2e-48 194.1 180 57.8
Cpa.g.sc29.103 Carica papaya HOM05D005835 ORTHO05D007187 1.2e-47 193.7 180 53.9
Haze_08597 Corylus avellana HOM05D005835 ORTHO05D007187 1.6e-47 193.4 179 57.0
FvH4_5g00490 Fragaria vesca HOM05D005835 ORTHO05D007187 2.0e-47 193.0 179 55.3
FAN18G1180 Fragaria x ananassa HOM05D005835 ORTHO05D007187 2.0e-47 193.0 179 55.3
Duzib205G1381 Durio zibethinus HOM05D005835 ORTHO05D007187 4.6e-47 191.8 176 55.7
ClCG10G003070 Citrullus lanatus HOM05D005835 ORTHO05D007187 6.0e-47 191.4 179 56.4
MELO3C013977.2 Cucumis melo HOM05D005835 ORTHO05D007187 1.7e-46 189.9 179 55.3
CsaV3_3G003110 Cucumis sativus L. HOM05D005835 ORTHO05D007187 2.3e-46 189.5 179 55.3
Atru.chr9.1404 Acer truncatum HOM05D005835 ORTHO05D007187 3.0e-46 189.1 173 56.6
Sed0018910 Sechium edule HOM05D005835 ORTHO05D007187 8.6e-46 187.6 179 55.9
FAN04G1493 Fragaria x ananassa HOM05D005835 ORTHO05D007187 1.5e-45 186.8 179 54.2
Sc16g0006190 Simmondsia chinensis HOM05D005835 ORTHO05D007187 7.3e-45 184.5 177 53.1
Thecc.03G259800 Theobroma cacao HOM05D005835 ORTHO05D007187 7.3e-45 184.5 178 53.9
ECA233G2089 Erigeron canadensis HOM05D005835 ORTHO05D007187 9.5e-45 184.1 178 56.2
Duzib084G0572 Durio zibethinus HOM05D005835 ORTHO05D007187 1.6e-44 183.3 176 55.7
Sc02g0009280 Simmondsia chinensis HOM05D005835 ORTHO05D007187 1.6e-44 183.3 177 52.0
Aqoxy7G00679 Aquilegia oxysepala HOM05D005835 ORTHO05D007187 3.6e-44 182.2 175 56.6
RcHm_v2.0_Chr7g0202021 Rosa chinensis HOM05D005835 ORTHO05D007187 4.7e-44 181.8 179 53.6
Cfa012808 Carpinus fangiana HOM05D005835 ORTHO05D007187 8.1e-44 181.0 174 56.3
Manes.01G074300 Manihot esculenta HOM05D005835 ORTHO05D007187 8.1e-44 181.0 178 53.4
COL.COLO4_23892 Corchorus olitorius HOM05D005835 ORTHO05D007187 1.4e-43 180.3 177 54.8
PGR031G1343 Punica granatum HOM05D005835 ORTHO05D007187 4.0e-43 178.7 178 56.2
CANSAT21G1576 Cannabis sativa HOM05D005835 ORTHO05D007187 5.2e-43 178.3 174 55.2
Gohir.D03G159700 Gossypium hirsutum HOM05D005835 ORTHO05D007187 1.2e-42 177.2 178 51.1
CiPaw.11G149200 Carya illinoinensis HOM05D005835 ORTHO05D007187 2.6e-42 176.0 173 56.6
Potri.003G114200 Populus trichocarpa HOM05D005835 ORTHO05D007187 2.6e-42 176.0 178 51.7
Sabra03G0079300 Salix brachista HOM05D005835 ORTHO05D007187 4.4e-42 175.3 178 51.1
arahy.Tifrunner.gnm1.ann1.7G3HX4 Arachis hypogaea HOM05D005835 ORTHO05D007187 9.8e-42 174.1 167 56.3
Ciclev10022502m.g Citrus clementina HOM05D005835 ORTHO05D007187 1.3e-41 173.7 178 52.8
HanXRQChr13g0394681 Helianthus annuus HOM05D005835 ORTHO05D007187 1.7e-41 173.3 178 54.5
HanXRQChr02g0049681 Helianthus annuus HOM05D005835 ORTHO05D007187 2.2e-41 172.9 188 52.7
Gohir.D12G222800 Gossypium hirsutum HOM05D005835 ORTHO05D007187 4.9e-41 171.8 179 53.1
Gorai.008G238900 Gossypium raimondii HOM05D005835 ORTHO05D007187 4.9e-41 171.8 179 53.1
arahy.Tifrunner.gnm1.ann1.4SJ6CH Arachis hypogaea HOM05D005835 ORTHO05D007187 8.3e-41 171.0 168 54.8
PSO782G1790 Papaver somniferum HOM05D005835 ORTHO05D007187 8.3e-41 171.0 187 56.1
Potri.001G118700 Populus trichocarpa HOM05D005835 ORTHO05D007187 8.3e-41 171.0 178 51.1
Gohir.A03G013800 Gossypium hirsutum HOM05D005835 ORTHO05D007187 1.1e-40 170.6 177 49.7
AUR62029858 Chenopodium quinoa HOM05D005835 ORTHO05D007187 1.4e-40 170.2 168 51.8
AUR62025857 Chenopodium quinoa HOM05D005835 ORTHO05D007187 1.9e-40 169.9 168 51.8
Gorai.003G168000 Gossypium raimondii HOM05D005835 ORTHO05D007187 1.9e-40 169.9 178 49.4
Gohir.A12G220500 Gossypium hirsutum HOM05D005835 ORTHO05D007187 9.2e-40 167.5 179 52.5
EL10Ac4g07900 Beta vulgaris HOM05D005835 ORTHO05D007187 1.2e-39 167.2 171 51.5
CDE02G0720 Ceratophyllum demersum HOM05D005835 ORTHO05D007187 6.0e-39 164.9 180 48.3
Manes.02G034200 Manihot esculenta HOM05D005835 ORTHO05D007187 6.0e-39 164.9 176 48.9
PSO478G0096 Papaver somniferum HOM05D005835 ORTHO05D007187 6.0e-39 164.9 181 55.2
HPP92_005292 Vanilla planifolia HOM05D005835 ORTHO05D007187 6.0e-39 164.9 176 48.9
Ah.01g013950 Amaranthus hybridus HOM05D005835 ORTHO05D007187 1.0e-38 164.1 168 51.2
Aa31LG9G10270 Aethionema arabicum HOM05D005835 ORTHO05D007187 1.7e-38 163.3 180 51.1
Hund02098 Selenicereus undatus HOM05D005835 ORTHO05D007187 1.7e-38 163.3 172 49.4
Ca_12275_v3 Cicer arietinum L. HOM05D005835 ORTHO05D007187 6.6e-38 161.4 168 56.0
QL03p017823 Quercus lobata HOM05D005835 ORTHO05D007187 6.6e-38 161.4 174 51.1
QL93p2009_0035 Quercus lobata HOM05D005835 ORTHO05D007187 6.6e-38 161.4 174 51.1
Psat0s1988g0040 Pisum sativum HOM05D005835 ORTHO05D007187 8.6e-38 161.0 168 54.8
CSS0008349 Camellia sinensis var. sinensis HOM05D005835 ORTHO05D007187 3.3e-37 159.1 171 51.5
Lalb_Chr16g0389651 Lupinus albus HOM05D005835 ORTHO05D007187 5.6e-37 158.3 167 52.1
TPR.G37587 Trifolium pratense HOM05D005835 ORTHO05D007187 9.5e-37 157.5 169 54.4
CSS0045584 Camellia sinensis var. sinensis HOM05D005835 ORTHO05D007187 1.6e-36 156.8 154 51.3
CDE04G3390 Ceratophyllum demersum HOM05D005835 ORTHO05D007187 1.6e-36 156.8 179 46.9
Lalb_Chr05g0225471 Lupinus albus HOM05D005835 ORTHO05D007187 2.1e-36 156.4 167 52.7
VMungo1215G0693 Vigna mungo HOM05D005835 ORTHO05D007187 2.1e-36 156.4 167 52.1
Phvul.003G214325 Phaseolus vulgaris HOM05D005835 ORTHO05D007187 6.2e-36 154.8 167 50.9
Sabra01G0091600 Salix brachista HOM05D005835 ORTHO05D007187 8.1e-36 154.5 178 48.3
TWI15G0429 Tripterygium wilfordii HOM05D005835 ORTHO05D007187 1.4e-35 153.7 117 64.1
Glyma.05G051800 Glycine max HOM05D005835 ORTHO05D007187 3.1e-35 152.5 167 53.9
GSVIVG01004287001 Vitis vinifera HOM05D005835 ORTHO05D007187 3.1e-35 152.5 177 49.7
GSVIVG01007420001 Vitis vinifera HOM05D005835 ORTHO05D007187 8.9e-35 151.0 176 49.4
Medtr4g102330 Medicago truncatula HOM05D005835 ORTHO05D007187 2.6e-34 149.4 168 50.6
Sp6g05250 Schrenkiella parvula HOM05D005835 ORTHO05D007187 4.4e-34 148.7 173 45.7
Carub.0006s3148 Capsella rubella HOM05D005835 ORTHO05D007187 9.9e-34 147.5 178 46.1
CARHR253910 Cardamine hirsuta HOM05D005835 ORTHO05D007187 2.9e-33 146.0 173 46.2
Os05g0103500 Oryza sativa ssp. japonica HOM05D005835 ORTHO05D007187 6.4e-33 144.8 174 47.1
Zm00001eb356210 Zea mays HOM05D005835 ORTHO05D007187 6.4e-33 144.8 169 48.5
AL6G47200 Arabidopsis lyrata HOM05D005835 ORTHO05D007187 2.4e-32 142.9 178 44.4
QL12p014300 Quercus lobata HOM05D005835 ORTHO05D007187 2.4e-32 142.9 169 46.7
C02p40850 Brassica napus HOM05D005835 ORTHO05D007187 2.7e-31 139.4 173 43.4
AT4G12340 Arabidopsis thaliana HOM05D005835 ORTHO05D007187 3.5e-31 139.0 178 43.3
BcaC03g16290 Brassica carinata HOM05D005835 ORTHO05D007187 4.6e-31 138.7 173 43.4
BolC2t10102H Brassica oleracea HOM05D005835 ORTHO05D007187 4.6e-31 138.7 173 43.4
Lsat_1_v5_gn_6_4381 Lactuca sativa HOM05D005835 ORTHO05D007187 2.3e-30 136.3 176 46.0
Thhalv10029018m.g Eutrema salsugineum HOM05D005835 ORTHO05D007187 3.9e-30 135.6 175 41.7
THA.LOC104806344 Tarenaya hassleriana HOM05D005835 ORTHO05D007187 2.5e-29 132.9 188 43.6
BraA02t07561Z Brassica rapa HOM05D005835 ORTHO05D007187 3.3e-29 132.5 172 41.3
A02p25690 Brassica napus HOM05D005835 ORTHO05D007187 7.3e-29 131.3 173 42.2
A09p26960 Brassica napus HOM05D005835 ORTHO05D007187 7.3e-29 131.3 179 42.5
BraA09t38266Z Brassica rapa HOM05D005835 ORTHO05D007187 7.3e-29 131.3 179 42.5
THA.LOC104813805 Tarenaya hassleriana HOM05D005835 ORTHO05D007187 1.2e-28 130.6 177 45.8
C09p34190 Brassica napus HOM05D005835 ORTHO05D007187 4.7e-28 128.6 178 43.3
BolC9t56264H Brassica oleracea HOM05D005835 ORTHO05D007187 4.7e-28 128.6 178 43.3
ATR0115G012 Amborella trichopoda HOM05D005835 ORTHO05D007187 6.2e-28 128.3 183 44.8
BcaB05g23754 Brassica carinata HOM05D005835 ORTHO05D007187 1.4e-27 127.1 173 41.0
BcaB01g01732 Brassica carinata HOM05D005835 ORTHO05D007187 3.1e-27 125.9 177 40.1
SHI20590 Sapria himalayana HOM05D005835 ORTHO05D007187 4.0e-27 125.6 178 43.8
BcaC04g21221 Brassica carinata HOM05D005835 ORTHO05D007187 8.9e-27 124.4 171 42.7
Actinidia05173 Actinidia chinensis HOM05D005835 ORTHO05D000538 3.4e-26 122.5 114 57.9
CARHR253930 Cardamine hirsuta HOM05D005835 ORTHO05D007187 2.2e-25 119.8 111 54.1
SEGI_03973 Sequoiadendron giganteum HOM05D005835 ORTHO05D007187 2.5e-21 106.3 178 39.9
Mapoly0001s0295 Marchantia polymorpha HOM05D005835 ORTHO05D007187 3.0e-14 82.8 189 31.2
Pp3c15_5650 Physcomitrium patens HOM05D005835 ORTHO05D007187 2.8e-12 76.3 184 31.5
CBR_g50926 Chara braunii HOM05D005835 ORTHO05D007187 3.6e-12 75.9 93 44.1
Pp3c8_11610 Physcomitrium patens HOM05D005835 ORTHO05D007187 4.9e-09 65.5 179 29.6


User provided reference genes

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