Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1520.3 Capsicum annuum HOM05D007012 ORTHO05D008882 2.4e-60 235.3 122 100.0
Nitab4.5_0001225g0050 Nicotiana tabacum HOM05D007012 ORTHO05D008882 8.9e-55 216.9 120 93.3
Nitab4.5_0004615g0020 Nicotiana tabacum HOM05D007012 ORTHO05D008882 2.6e-54 215.3 124 91.9
Solyc02g069820.3 Solanum lycopersicum HOM05D007012 ORTHO05D008882 7.5e-54 213.8 120 92.5
Sopen02g018980 Solanum pennellii HOM05D007012 ORTHO05D008882 9.8e-54 213.4 120 92.5
PGSC0003DMG400021126 Solanum tuberosum HOM05D007012 ORTHO05D008882 9.8e-54 213.4 120 92.5
Peaxi162Scf00100g01517 Petunia axillaris HOM05D007012 ORTHO05D008882 1.9e-52 209.1 120 88.3
Cc09_g08050 Coffea canephora HOM05D007012 ORTHO05D008882 3.3e-49 198.4 120 80.8
Dinv35474 Davidia involucrata HOM05D007012 ORTHO05D008882 2.8e-48 195.3 120 80.0
CSS0014344 Camellia sinensis var. sinensis HOM05D007012 ORTHO05D008882 4.7e-48 194.5 120 80.8
vmacro03442 Vaccinium macrocarpon HOM05D007012 ORTHO05D008882 6.2e-48 194.1 120 80.0
Hma1.2p1_0333F.1_g128270 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 1.1e-47 193.4 120 80.8
Atru.chr10.869 Acer truncatum HOM05D007012 ORTHO05D008882 1.4e-47 193.0 120 81.7
Rhsim05G0222100 Rhododendron simsii HOM05D007012 ORTHO05D008882 2.3e-47 192.2 120 80.0
TWI09G0010 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 5.2e-47 191.0 121 81.0
TWI73G0699 Tripterygium wilfordii HOM05D007012 ORTHO05D008882 8.9e-47 190.3 121 79.3
CiPaw.09G115600 Carya illinoinensis HOM05D007012 ORTHO05D008882 1.2e-46 189.9 120 80.0
TAR629G2694 Trochodendron aralioides HOM05D007012 ORTHO05D008882 2.6e-46 188.7 120 78.3
Ciclev10017190m.g Citrus clementina HOM05D007012 ORTHO05D008882 3.4e-46 188.3 120 79.2
Actinidia03306 Actinidia chinensis HOM05D007012 ORTHO05D008882 7.5e-46 187.2 119 79.0
Gohir.A06G207700 Gossypium hirsutum HOM05D007012 ORTHO05D008882 7.5e-46 187.2 122 79.5
QL05p061226 Quercus lobata HOM05D007012 ORTHO05D008882 7.5e-46 187.2 119 76.5
MSTRG.7536 Avicennia marina HOM05D007012 ORTHO05D008882 9.8e-46 186.8 118 77.1
Gohir.D06G213600 Gossypium hirsutum HOM05D007012 ORTHO05D008882 9.8e-46 186.8 122 78.7
Gorai.010G252500 Gossypium raimondii HOM05D007012 ORTHO05D008882 9.8e-46 186.8 122 78.7
Migut.M01890 Erythranthe guttata HOM05D007012 ORTHO05D008882 1.7e-45 186.0 118 78.0
Manes.14G122800 Manihot esculenta HOM05D007012 ORTHO05D008882 1.7e-45 186.0 119 78.2
GSVIVG01021626001 Vitis vinifera HOM05D007012 ORTHO05D008882 2.9e-45 185.3 120 77.5
Migut.M00621 Erythranthe guttata HOM05D007012 ORTHO05D008882 4.9e-45 184.5 118 77.1
Migut.M01889 Erythranthe guttata HOM05D007012 ORTHO05D008882 8.3e-45 183.7 118 78.0
Potri.011G098200 Populus trichocarpa HOM05D007012 ORTHO05D008882 8.3e-45 183.7 118 78.8
Thecc.06G001300 Theobroma cacao HOM05D007012 ORTHO05D008882 1.4e-44 183.0 120 75.8
MD10G1253600 Malus domestica HOM05D007012 ORTHO05D008882 2.4e-44 182.2 118 78.0
SGA_v2.0_scaffold1G00245 Striga asiatica HOM05D007012 ORTHO05D008882 5.4e-44 181.0 120 74.2
CiPaw.10G085800 Carya illinoinensis HOM05D007012 ORTHO05D008882 9.2e-44 180.3 120 76.7
Sed0027179 Sechium edule HOM05D007012 ORTHO05D008882 1.2e-43 179.9 118 75.4
Lsat_1_v5_gn_1_117760 Lactuca sativa HOM05D007012 ORTHO05D008882 2.1e-43 179.1 120 74.2
RcHm_v2.0_Chr5g0015911 Rosa chinensis HOM05D007012 ORTHO05D008882 2.1e-43 179.1 118 76.3
CANSAT11G0200 Cannabis sativa HOM05D007012 ORTHO05D008882 3.5e-43 178.3 122 74.6
Sabra11G0090900 Salix brachista HOM05D007012 ORTHO05D008882 6.0e-43 177.6 118 77.1
unitig_748.g7806 Utricularia gibba HOM05D007012 ORTHO05D008882 1.0e-42 176.8 121 72.7
FAN25G0029 Fragaria x ananassa HOM05D007012 ORTHO05D008882 1.3e-42 176.4 118 74.6
HanXRQChr15g0468791 Helianthus annuus HOM05D007012 ORTHO05D008882 1.7e-42 176.0 122 74.6
Sabra11G0084700 Salix brachista HOM05D007012 ORTHO05D008882 1.7e-42 176.0 118 76.3
Prupe.4G090000 Prunus persica HOM05D007012 ORTHO05D008882 3.0e-42 175.3 119 72.3
PGR031G1292 Punica granatum HOM05D007012 ORTHO05D008882 3.0e-42 175.3 120 72.5
MELO3C023274.2 Cucumis melo HOM05D007012 ORTHO05D008882 3.9e-42 174.9 118 73.7
BcaC06g30880 Brassica carinata HOM05D007012 ORTHO05D008882 5.1e-42 174.5 119 70.6
FvH4_3g10060 Fragaria vesca HOM05D007012 ORTHO05D008882 5.1e-42 174.5 118 73.7
Sp2g17760 Schrenkiella parvula HOM05D007012 ORTHO05D008882 5.1e-42 174.5 119 70.6
ClCG02G000770 Citrullus lanatus HOM05D007012 ORTHO05D008882 6.6e-42 174.1 118 72.9
HPP92_000966 Vanilla planifolia HOM05D007012 ORTHO05D008882 8.6e-42 173.7 118 71.2
AL5G19030 Arabidopsis lyrata HOM05D007012 ORTHO05D008882 1.1e-41 173.3 119 70.6
Thhalv10005148m.g Eutrema salsugineum HOM05D007012 ORTHO05D008882 1.1e-41 173.3 119 70.6
FAN21G1693 Fragaria x ananassa HOM05D007012 ORTHO05D008882 1.1e-41 173.3 118 72.9
Eucgr.K01942 Eucalyptus grandis HOM05D007012 ORTHO05D008882 3.3e-41 171.8 120 71.7
arahy.Tifrunner.gnm1.ann1.HAVC5G Arachis hypogaea HOM05D007012 ORTHO05D008882 4.3e-41 171.4 124 67.7
BcaC06g33671 Brassica carinata HOM05D007012 ORTHO05D008882 4.3e-41 171.4 119 69.7
C07p38010 Brassica napus HOM05D007012 ORTHO05D008882 4.3e-41 171.4 119 69.7
BolC7t44322H Brassica oleracea HOM05D007012 ORTHO05D008882 4.3e-41 171.4 119 69.7
CARHR152280 Cardamine hirsuta HOM05D007012 ORTHO05D008882 4.3e-41 171.4 119 70.6
SalBow8G4607 Salvia bowleyana HOM05D007012 ORTHO05D008882 4.3e-41 171.4 136 65.4
arahy.Tifrunner.gnm1.ann1.80D497 Arachis hypogaea HOM05D007012 ORTHO05D008882 7.3e-41 170.6 126 66.7
ECA248G1541 Erigeron canadensis HOM05D007012 ORTHO05D008882 7.3e-41 170.6 121 73.6
PSO675G5463 Papaver somniferum HOM05D007012 ORTHO05D008882 7.3e-41 170.6 120 70.0
Carub.0005s0786 Capsella rubella HOM05D007012 ORTHO05D008882 9.5e-41 170.2 119 67.2
MD05G1273800 Malus domestica HOM05D007012 ORTHO05D008882 1.2e-40 169.9 118 73.7
PSO541G1654 Papaver somniferum HOM05D007012 ORTHO05D008882 1.6e-40 169.5 120 68.3
QL05p061674 Quercus lobata HOM05D007012 ORTHO05D008882 2.1e-40 169.1 151 59.6
A06p40130 Brassica napus HOM05D007012 ORTHO05D008882 2.8e-40 168.7 119 68.9
Aa31LG2G4090 Aethionema arabicum HOM05D007012 ORTHO05D008882 3.6e-40 168.3 119 67.2
Glyma.05G166500 Glycine max HOM05D007012 ORTHO05D008882 8.1e-40 167.2 122 68.0
THA.LOC104805486 Tarenaya hassleriana HOM05D007012 ORTHO05D008882 5.2e-39 164.5 119 68.1
AUR62005835 Chenopodium quinoa HOM05D007012 ORTHO05D008882 8.9e-39 163.7 122 68.9
AUR62032828 Chenopodium quinoa HOM05D007012 ORTHO05D008882 8.9e-39 163.7 122 68.9
Lalb_Chr12g0204651 Lupinus albus HOM05D007012 ORTHO05D008882 8.9e-39 163.7 122 65.6
Ah.02g129420 Amaranthus hybridus HOM05D007012 ORTHO05D008882 4.4e-38 161.4 120 66.7
Phvul.002G246900 Phaseolus vulgaris HOM05D007012 ORTHO05D008882 3.7e-37 158.3 123 66.7
Medtr8g088380 Medicago truncatula HOM05D007012 ORTHO05D008882 8.3e-37 157.1 120 62.5
Sc24g0001360 Simmondsia chinensis HOM05D007012 ORTHO05D008882 8.3e-37 157.1 122 67.2
Migut.M00618 Erythranthe guttata HOM05D007012 ORTHO05D008882 1.1e-36 156.8 108 71.3
Hund20768 Selenicereus undatus HOM05D007012 ORTHO05D008882 1.1e-36 156.8 114 70.2
TPR.G6804 Trifolium pratense HOM05D007012 ORTHO05D008882 1.4e-36 156.4 120 61.7
EL10Ac6g13254 Beta vulgaris HOM05D007012 ORTHO05D008882 5.4e-36 154.5 114 67.5
Lj4g0006275 Lotus japonicus HOM05D007012 ORTHO05D008882 7.1e-36 154.1 116 62.9
Psat7g066160 Pisum sativum HOM05D007012 ORTHO05D008882 1.2e-35 153.3 120 60.8
Sed0002894 Sechium edule HOM05D007012 ORTHO05D008882 1.0e-34 150.2 101 72.3
CDE08G0050 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 1.7e-34 149.4 117 63.2
SEGI_30962 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 8.6e-34 147.1 118 63.6
Zm00001eb218740 Zea mays HOM05D007012 ORTHO05D008882 2.5e-33 145.6 112 60.7
Os03g0640400 Oryza sativa ssp. japonica HOM05D007012 ORTHO05D008882 3.3e-33 145.2 112 61.6
Cfa000822 Carpinus fangiana HOM05D007012 ORTHO05D008882 2.8e-32 142.1 86 82.6
BraA06t26928Z Brassica rapa HOM05D007012 ORTHO05D008882 6.2e-32 141.0 174 46.6
Hma1.2p1_0333F.1_g128260 Hydrangea macrophylla HOM05D007012 ORTHO05D008882 1.4e-31 139.8 85 82.4
AT3G29130 Arabidopsis thaliana HOM05D007012 ORTHO05D008882 1.7e-29 132.9 87 71.3
Haze_05817 Corylus avellana HOM05D007012 ORTHO05D008882 1.7e-29 132.9 89 76.4
FAN11G2674 Fragaria x ananassa HOM05D007012 ORTHO05D008882 2.2e-29 132.5 86 79.1
FAN16G3160 Fragaria x ananassa HOM05D007012 ORTHO05D008882 2.2e-29 132.5 86 79.1
CsaV3_2G017990 Cucumis sativus L. HOM05D007012 ORTHO05D008882 1.1e-28 130.2 84 78.6
CDE08G0396 Ceratophyllum demersum HOM05D007012 ORTHO05D008882 2.4e-28 129.0 94 67.0
Aqoxy1G01570 Aquilegia oxysepala HOM05D007012 ORTHO05D008882 3.2e-28 128.6 94 70.2
Oeu034103.1 Olea europaea HOM05D007012 ORTHO05D008882 9.3e-28 127.1 86 73.3
VMungo0251G0322 Vigna mungo HOM05D007012 ORTHO05D008882 2.7e-27 125.6 89 71.9
AagrBONN_evm.TU.Sc2ySwM_368.2441 Anthoceros agrestis HOM05D007012 ORTHO05D008882 1.9e-25 119.4 122 50.0
Pp3c17_18250 Physcomitrium patens HOM05D007012 ORTHO05D008882 1.9e-25 119.4 116 55.2
SEGI_05812 Sequoiadendron giganteum HOM05D007012 ORTHO05D008882 5.6e-25 117.9 81 70.4
ATR0165G051 Amborella trichopoda HOM05D007012 ORTHO05D008882 1.6e-24 116.3 90 63.3
Mapoly0001s0437 Marchantia polymorpha HOM05D007012 ORTHO05D008882 3.6e-24 115.2 121 48.8
Migut.M00617 Erythranthe guttata HOM05D007012 ORTHO05D008882 1.8e-23 112.8 115 53.0
CBR_g52649 Chara braunii HOM05D007012 ORTHO05D008882 7.6e-22 107.5 107 45.8
AagrBONN_evm.TU.Sc2ySwM_117.2140 Anthoceros agrestis HOM05D007012 ORTHO05D008882 5.4e-20 101.3 85 57.6
Glyma.08G124500 Glycine max HOM05D007012 ORTHO05D008882 1.7e-18 96.3 54 81.5
Nn3g20226 Nelumbo nucifera HOM05D007012 ORTHO05D008882 1.5e-09 66.6 120 38.3


User provided reference genes

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