Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G152.17 Capsicum annuum HOM05D007220 ORTHO05D009058 6.0e-74 281.2 192 100.0
Solyc03g083570.3 Solanum lycopersicum HOM05D007220 ORTHO05D009058 1.1e-56 223.8 196 74.5
Sopen03g023380 Solanum pennellii HOM05D007220 ORTHO05D009058 1.1e-56 223.8 195 85.1
Peaxi162Scf00241g00624 Petunia axillaris HOM05D007220 ORTHO05D009058 4.5e-53 211.8 196 73.0
Nitab4.5_0000072g0560 Nicotiana tabacum HOM05D007220 ORTHO05D009058 1.3e-52 210.3 195 79.5
Nitab4.5_0001548g0050 Nicotiana tabacum HOM05D007220 ORTHO05D009058 4.2e-51 205.3 196 70.9
PGSC0003DMG400023001 Solanum tuberosum HOM05D007220 ORTHO05D009058 2.6e-45 186.0 262 61.8
SGA_v2.0_scaffold486G52391 Striga asiatica HOM05D007220 ORTHO05D009058 2.5e-43 179.5 109 78.0
Cc02_g04040 Coffea canephora HOM05D007220 ORTHO05D009058 2.1e-42 176.4 109 80.7
SGA_v2.0_scaffold2G01175 Striga asiatica HOM05D007220 ORTHO05D009058 3.0e-41 172.6 108 76.9
MSTRG.27183 Avicennia marina HOM05D007220 ORTHO05D009058 2.8e-39 166.0 106 78.3
GSVIVG01018558001 Vitis vinifera HOM05D007220 ORTHO05D009058 1.1e-38 164.1 106 77.4
SalBow4G2286 Salvia bowleyana HOM05D007220 ORTHO05D009058 1.8e-38 163.3 109 75.2
Manes.14G034000 Manihot esculenta HOM05D007220 ORTHO05D009058 7.0e-38 161.4 109 74.3
CiPaw.04G061800 Carya illinoinensis HOM05D007220 ORTHO05D009058 9.1e-38 161.0 106 77.4
unitig_46.g18768 Utricularia gibba HOM05D007220 ORTHO05D009058 9.1e-38 161.0 103 73.8
Thecc.03G158900 Theobroma cacao HOM05D007220 ORTHO05D009058 3.5e-37 159.1 109 70.6
Dinv22967 Davidia involucrata HOM05D007220 ORTHO05D009058 4.5e-37 158.7 109 72.5
Cpa.g.sc3.292 Carica papaya HOM05D007220 ORTHO05D009058 5.9e-37 158.3 109 71.6
Dinv28549 Davidia involucrata HOM05D007220 ORTHO05D009058 7.7e-37 157.9 108 74.1
Migut.F00451 Erythranthe guttata HOM05D007220 ORTHO05D009058 7.7e-37 157.9 109 70.6
Gohir.D07G043100 Gossypium hirsutum HOM05D007220 ORTHO05D009058 1.7e-36 156.8 106 71.7
COL.COLO4_14153 Corchorus olitorius HOM05D007220 ORTHO05D009058 2.2e-36 156.4 107 72.0
Gohir.A07G038900 Gossypium hirsutum HOM05D007220 ORTHO05D009058 2.9e-36 156.0 106 71.7
Gorai.001G046100 Gossypium raimondii HOM05D007220 ORTHO05D009058 2.9e-36 156.0 106 71.7
Duzib205G1715 Durio zibethinus HOM05D007220 ORTHO05D009058 8.5e-36 154.5 109 70.6
ClCG05G007450 Citrullus lanatus HOM05D007220 ORTHO05D009058 1.1e-35 154.1 107 72.0
Glyma.09G232600 Glycine max HOM05D007220 ORTHO05D009058 1.5e-35 153.7 109 69.7
Actinidia25024 Actinidia chinensis HOM05D007220 ORTHO05D009058 2.5e-35 152.9 106 71.7
arahy.Tifrunner.gnm1.ann1.0IXC5E Arachis hypogaea HOM05D007220 ORTHO05D009058 2.5e-35 152.9 109 69.7
PGR042G1708 Punica granatum HOM05D007220 ORTHO05D009058 3.2e-35 152.5 106 70.8
THA.LOC104811513 Tarenaya hassleriana HOM05D007220 ORTHO05D009058 3.2e-35 152.5 109 69.7
Eucgr.A02878 Eucalyptus grandis HOM05D007220 ORTHO05D009058 7.2e-35 151.4 109 68.8
CsaV3_3G016270 Cucumis sativus L. HOM05D007220 ORTHO05D009058 9.4e-35 151.0 107 71.0
Nn4g26358 Nelumbo nucifera HOM05D007220 ORTHO05D009058 1.2e-34 150.6 102 70.6
Sabra15G0142900 Salix brachista HOM05D007220 ORTHO05D009058 1.2e-34 150.6 100 74.0
Potri.015G129600 Populus trichocarpa HOM05D007220 ORTHO05D009058 1.6e-34 150.2 100 77.0
Cfa008220 Carpinus fangiana HOM05D007220 ORTHO05D009058 2.1e-34 149.8 105 73.3
MELO3C006826.2 Cucumis melo HOM05D007220 ORTHO05D009058 2.7e-34 149.4 107 70.1
HanXRQChr08g0223851 Helianthus annuus HOM05D007220 ORTHO05D009058 4.7e-34 148.7 111 66.7
Lsat_1_v5_gn_8_9340 Lactuca sativa HOM05D007220 ORTHO05D009058 6.1e-34 148.3 112 67.9
Haze_13838 Corylus avellana HOM05D007220 ORTHO05D009058 1.0e-33 147.5 99 75.8
QL09p019051 Quercus lobata HOM05D007220 ORTHO05D009058 1.0e-33 147.5 105 71.4
Sc19g0001910 Simmondsia chinensis HOM05D007220 ORTHO05D009058 3.0e-33 146.0 102 72.5
AUR62016183 Chenopodium quinoa HOM05D007220 ORTHO05D009058 8.8e-33 144.4 110 66.4
VMungo1127G0384 Vigna mungo HOM05D007220 ORTHO05D009058 1.2e-32 144.1 108 67.6
EL10Ac3g05813 Beta vulgaris HOM05D007220 ORTHO05D009058 1.5e-32 143.7 108 65.7
CSS0026352 Camellia sinensis var. sinensis HOM05D007220 ORTHO05D009058 3.3e-32 142.5 100 70.0
Ciclev10005924m.g Citrus clementina HOM05D007220 ORTHO05D009058 4.4e-32 142.1 109 65.1
Atru.chr1.664 Acer truncatum HOM05D007220 ORTHO05D009058 5.7e-32 141.7 106 65.1
BraA03t10902Z Brassica rapa HOM05D007220 ORTHO05D009058 9.7e-32 141.0 109 64.2
MD01G1184500 Malus domestica HOM05D007220 ORTHO05D009058 9.7e-32 141.0 107 62.6
FAN03G0488 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.3e-31 140.6 104 64.4
FAN03G2818 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.3e-31 140.6 104 64.4
FAN06G4318 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.3e-31 140.6 107 63.6
FAN10G3220 Fragaria x ananassa HOM05D007220 ORTHO05D009058 1.3e-31 140.6 104 64.4
Lj8A39T34 Lonicera japonica HOM05D007220 ORTHO05D009058 1.3e-31 140.6 103 68.9
vmacro09892 Vaccinium macrocarpon HOM05D007220 ORTHO05D009058 1.3e-31 140.6 107 64.5
Ca_30916_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 1.7e-31 140.2 103 67.0
FvH4_7g27960 Fragaria vesca HOM05D007220 ORTHO05D009058 1.7e-31 140.2 107 63.6
Phvul.011G004500 Phaseolus vulgaris HOM05D007220 ORTHO05D009058 2.8e-31 139.4 108 65.7
BcaC01g06128 Brassica carinata HOM05D007220 ORTHO05D009058 4.8e-31 138.7 109 63.3
C03p18980 Brassica napus HOM05D007220 ORTHO05D009058 4.8e-31 138.7 109 63.3
BolC3t14287H Brassica oleracea HOM05D007220 ORTHO05D009058 4.8e-31 138.7 109 63.3
FAN01G2832 Fragaria x ananassa HOM05D007220 ORTHO05D009058 4.8e-31 138.7 104 64.4
FAN06G0674 Fragaria x ananassa HOM05D007220 ORTHO05D009058 4.8e-31 138.7 104 63.5
CARHR264320 Cardamine hirsuta HOM05D007220 ORTHO05D009058 6.3e-31 138.3 103 66.0
Rhsim09G0192800 Rhododendron simsii HOM05D007220 ORTHO05D009058 6.3e-31 138.3 107 63.6
TWI39G1186 Tripterygium wilfordii HOM05D007220 ORTHO05D009058 6.3e-31 138.3 105 65.7
A03p16110 Brassica napus HOM05D007220 ORTHO05D009058 8.2e-31 137.9 101 65.3
Medtr4g035825 Medicago truncatula HOM05D007220 ORTHO05D009058 8.2e-31 137.9 111 58.6
RcHm_v2.0_Chr1g0374911 Rosa chinensis HOM05D007220 ORTHO05D009058 8.2e-31 137.9 109 60.6
Aqoxy7G00673 Aquilegia oxysepala HOM05D007220 ORTHO05D009058 3.1e-30 136.0 106 62.3
BcaB01g04168 Brassica carinata HOM05D007220 ORTHO05D009058 4.1e-30 135.6 101 64.4
Sp6g13740 Schrenkiella parvula HOM05D007220 ORTHO05D009058 7.0e-30 134.8 107 62.6
Psat7g150000 Pisum sativum HOM05D007220 ORTHO05D009058 1.6e-29 133.7 103 60.2
ECA233G2338 Erigeron canadensis HOM05D007220 ORTHO05D009058 5.9e-29 131.7 111 61.3
AL8G25850 Arabidopsis lyrata HOM05D007220 ORTHO05D009058 1.0e-28 131.0 109 60.6
AT5G51545 Arabidopsis thaliana HOM05D007220 ORTHO05D009058 1.3e-28 130.6 109 60.6
Aa31LG3G7960 Aethionema arabicum HOM05D007220 ORTHO05D009058 1.7e-28 130.2 107 62.6
CDE09G0763 Ceratophyllum demersum HOM05D007220 ORTHO05D009058 2.2e-28 129.8 107 62.6
Lj3g0016008 Lotus japonicus HOM05D007220 ORTHO05D009058 2.2e-28 129.8 111 58.6
Carub.0008s1158 Capsella rubella HOM05D007220 ORTHO05D009058 1.9e-27 126.7 109 59.6
PSO782G3417 Papaver somniferum HOM05D007220 ORTHO05D009058 2.7e-26 122.9 107 54.2
Zm00001eb230760 Zea mays HOM05D007220 ORTHO05D009058 1.0e-25 120.9 79 74.7
PSO478G4327 Papaver somniferum HOM05D007220 ORTHO05D009058 1.4e-25 120.6 107 52.3
arahy.Tifrunner.gnm1.ann1.83G6QR Arachis hypogaea HOM05D007220 ORTHO05D009058 5.2e-25 118.6 85 68.2
SEGI_29714 Sequoiadendron giganteum HOM05D007220 ORTHO05D009058 5.2e-25 118.6 98 59.2
HPP92_002073 Vanilla planifolia HOM05D007220 ORTHO05D009058 5.2e-25 118.6 103 58.3
ATR0730G016 Amborella trichopoda HOM05D007220 ORTHO05D009058 9.1e-22 107.8 102 57.8
TPR.G15117 Trifolium pratense HOM05D007220 ORTHO05D009058 1.5e-19 100.5 68 69.1
Potri.012G128000 Populus trichocarpa HOM05D007220 ORTHO05D009058 1.4e-17 94.0 99 54.5
AUR62035102 Chenopodium quinoa HOM05D007220 ORTHO05D009058 3.0e-17 92.8 108 47.2
AagrBONN_evm.TU.Sc2ySwM_228.5821 Anthoceros agrestis HOM05D007220 ORTHO05D009058 1.4e-14 84.0 93 46.2
Pp3c26_11240 Physcomitrium patens HOM05D007220 ORTHO05D009058 7.0e-14 81.6 98 46.9
MD07G1256600 Malus domestica HOM05D007220 ORTHO05D009058 2.0e-13 80.1 53 67.9
MBI12_g20320_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 3.5e-13 79.3 45 77.8
Mapoly0002s0242 Marchantia polymorpha HOM05D007220 ORTHO05D009058 1.7e-12 77.0 83 48.2
DCAR_009422 Daucus carota HOM05D007220 ORTHO05D009058 1.9e-11 73.6 61 62.3
DCAR_009423 Daucus carota HOM05D007220 ORTHO05D009058 1.9e-11 73.6 61 62.3
TAR629G2293 Trochodendron aralioides HOM05D007220 ORTHO05D009058 5.6e-11 72.0 60 60.0
HanXRQChr04g0107801 Helianthus annuus HOM05D000901 ORTHO05D001160 1.2e-10 70.9 69 55.1
Ca_20051_v3 Cicer arietinum L. HOM05D007220 ORTHO05D009058 4.0e-09 65.9 61 55.7
Sed0003033 Sechium edule HOM05D007220 ORTHO05D009058 5.2e-09 65.5 61 59.0
MBI12_g14970_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 2.6e-08 63.2 60 56.7
Prupe.2G280700 Prunus persica HOM05D007220 ORTHO05D009058 5.8e-08 62.0 56 51.8
MBI12_g25331_MAGBIO Magnolia biondii HOM05D007220 ORTHO05D009058 2.2e-07 60.1 62 53.2


User provided reference genes

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