Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1513.6 Capsicum annuum HOM05D009680 ORTHO05D010443 3.1e-62 241.5 111 100.0
Nitab4.5_0000014g0490 Nicotiana tabacum HOM05D009680 ORTHO05D010443 8.4e-28 127.1 93 61.3
Peaxi162Scf00690g00221 Petunia axillaris HOM05D009680 ORTHO05D010443 1.9e-27 125.9 100 59.0
CAN.G630.3 Capsicum annuum HOM05D009680 ORTHO05D010443 2.3e-25 119.0 88 60.2
Solyc08g080020.1 Solanum lycopersicum HOM05D009680 ORTHO05D010443 2.3e-25 119.0 101 52.5
Sopen08g028370 Solanum pennellii HOM05D000015 ORTHO05D000803 2.3e-25 119.0 85 58.8
PGSC0003DMG400026953 Solanum tuberosum HOM05D009680 ORTHO05D010443 2.3e-25 119.0 82 63.4
Nitab4.5_0006484g0030 Nicotiana tabacum HOM05D009680 ORTHO05D000653 6.7e-25 117.5 85 57.6
CAN.G630.2 Capsicum annuum HOM05D009680 ORTHO05D000653 8.7e-25 117.1 89 61.8
CAN.G630.4 Capsicum annuum HOM05D009680 ORTHO05D010443 8.7e-25 117.1 87 58.6
Peaxi162Scf00620g00054 Petunia axillaris HOM05D009680 ORTHO05D010443 1.6e-23 112.8 108 52.8
Peaxi162Scf01517g00130 Petunia axillaris HOM05D009680 ORTHO05D010443 6.2e-23 110.9 86 59.3
Peaxi162Scf00620g00517 Petunia axillaris HOM05D009680 ORTHO05D010443 1.1e-22 110.2 107 52.3
CAN.G630.1 Capsicum annuum HOM05D009680 ORTHO05D010443 1.4e-22 109.8 107 52.3
PGSC0003DMG400005142 Solanum tuberosum HOM05D009680 ORTHO05D010443 1.4e-22 109.8 94 54.3
CAN.G630.38 Capsicum annuum HOM05D009680 ORTHO05D010443 6.5e-20 100.9 87 56.3
Solyc11g007050.1 Solanum lycopersicum HOM05D009680 ORTHO05D000653 8.4e-20 100.5 109 51.4
PGSC0003DMG400026952 Solanum tuberosum HOM05D009680 ORTHO05D010443 1.9e-19 99.4 86 51.2
CAN.G630.39 Capsicum annuum HOM05D009680 ORTHO05D010443 9.3e-19 97.1 87 51.7
Sopen11g002970 Solanum pennellii HOM05D009680 ORTHO05D000653 7.9e-18 94.0 109 50.5
Nitab4.5_0010303g0010 Nicotiana tabacum HOM05D009680 ORTHO05D010443 2.2e-15 85.9 62 56.5
Peaxi162Scf00897g00013 Petunia axillaris HOM05D008628 ORTHO05D010443 3.7e-15 85.1 91 47.3
Nitab4.5_0000881g0060 Nicotiana tabacum HOM05D008628 ORTHO05D010443 1.2e-13 80.1 91 47.3
Nitab4.5_0009740g0010 Nicotiana tabacum HOM05D008628 ORTHO05D010443 1.2e-13 80.1 91 47.3
Hma1.2p1_2755F.1_g327950 Hydrangea macrophylla HOM05D008628 ORTHO05D010443 2.0e-13 79.3 92 46.7
Carub.0005s1637 Capsella rubella HOM05D008628 ORTHO05D010443 1.9e-11 72.8 94 43.6
Cc07_g18340 Coffea canephora HOM05D001004 ORTHO05D000653 3.2e-11 72.0 88 46.6
Migut.L00816 Erythranthe guttata HOM05D001004 ORTHO05D000653 4.2e-11 71.6 85 45.9
CARHR176870 Cardamine hirsuta HOM05D008628 ORTHO05D010443 5.5e-11 71.2 91 45.1
Cfa010162 Carpinus fangiana HOM05D009680 ORTHO05D000653 2.1e-10 69.3 85 43.5
Migut.C00655 Erythranthe guttata HOM05D009680 ORTHO05D000653 2.7e-10 68.9 86 43.0
Cfa005539 Carpinus fangiana HOM05D001004 ORTHO05D000653 4.6e-10 68.2 85 44.7
AL5G30140 Arabidopsis lyrata HOM05D008628 ORTHO05D010443 6.1e-10 67.8 88 40.9
TAR376G1036 Trochodendron aralioides HOM05D001004 ORTHO05D000653 1.0e-09 67.0 86 41.9
AT3G50020 Arabidopsis thaliana HOM05D008628 ORTHO05D010443 1.4e-09 66.6 88 38.6
Oeu030752.1 Olea europaea HOM05D008628 ORTHO05D000653 1.4e-09 66.6 87 41.4
MD15G1392900 Malus domestica HOM05D001004 ORTHO05D000653 2.3e-09 65.9 85 40.0
PGSC0003DMG400034659 Solanum tuberosum HOM05D009680 ORTHO05D010443 3.0e-09 65.5 92 40.2
TAR376G0093 Trochodendron aralioides HOM05D001004 ORTHO05D000653 3.9e-09 65.1 85 44.7
Oeu017841.1 Olea europaea HOM05D001004 ORTHO05D000653 5.1e-09 64.7 87 41.4
Oeu017833.1 Olea europaea HOM05D001004 ORTHO05D000653 6.7e-09 64.3 87 41.4
RcHm_v2.0_Chr6g0294471 Rosa chinensis HOM05D001004 ORTHO05D000653 6.7e-09 64.3 88 42.0
Migut.C00659 Erythranthe guttata HOM05D001004 ORTHO05D000653 8.8e-09 63.9 93 38.7
AL8G13560 Arabidopsis lyrata HOM05D008628 ORTHO05D010443 1.9e-08 62.8 79 40.5
Thhalv10011057m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 1.9e-08 62.8 86 38.4
Migut.C00658 Erythranthe guttata HOM05D001004 ORTHO05D000653 2.5e-08 62.4 86 41.9
Migut.H02350 Erythranthe guttata HOM05D009680 ORTHO05D000653 2.5e-08 62.4 85 42.4
Carub.0008s0288 Capsella rubella HOM05D008628 ORTHO05D010443 4.3e-08 61.6 79 40.5
Thhalv10001145m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 4.3e-08 61.6 84 41.7
MELO3C000685.2 Cucumis melo HOM05D001004 ORTHO05D000653 5.7e-08 61.2 85 37.6
Thhalv10011083m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 5.7e-08 61.2 88 40.9
Aqoxy117s001 Aquilegia oxysepala HOM05D001004 ORTHO05D000653 7.4e-08 60.8 91 38.5
Aqoxy3G01749 Aquilegia oxysepala HOM05D001004 ORTHO05D000653 7.4e-08 60.8 91 38.5
THA.LOC109116389 Tarenaya hassleriana HOM05D008628 ORTHO05D010443 9.7e-08 60.5 80 38.8
Thhalv10011101m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 1.3e-07 60.1 88 39.8
Nn4g26614 Nelumbo nucifera HOM05D008628 ORTHO05D010443 1.3e-07 60.1 86 40.7
COL.COLO4_35913 Corchorus olitorius HOM05D001004 ORTHO05D000653 1.7e-07 59.7 86 40.7
Eucgr.C02276 Eucalyptus grandis HOM05D001004 ORTHO05D000653 2.2e-07 59.3 85 40.0
Nn1g09270 Nelumbo nucifera HOM05D008628 ORTHO05D000653 2.2e-07 59.3 87 37.9
Oeu017850.1 Olea europaea HOM05D001004 ORTHO05D000653 2.2e-07 59.3 86 41.9
MELO3C034586.2 Cucumis melo HOM05D001004 ORTHO05D000653 2.8e-07 58.9 86 38.4
Migut.B00982 Erythranthe guttata HOM05D009680 ORTHO05D000653 3.7e-07 58.5 85 38.8
Thhalv10001147m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 3.7e-07 58.5 80 37.5
Peaxi162Scf00897g00113 Petunia axillaris HOM05D000048 ORTHO05D000207 3.7e-07 58.5 78 43.6
Eucgr.B01872 Eucalyptus grandis HOM05D001004 ORTHO05D000653 4.8e-07 58.2 91 39.6
CARHR155430 Cardamine hirsuta HOM05D001004 ORTHO05D000653 6.3e-07 57.8 85 37.6
Migut.F00732 Erythranthe guttata HOM05D001004 ORTHO05D000653 6.3e-07 57.8 83 44.6
Actinidia05828 Actinidia chinensis HOM05D008628 ORTHO05D010443 1.1e-06 57.0 76 42.1
FAN28G2625 Fragaria x ananassa HOM05D001004 ORTHO05D000653 1.1e-06 57.0 81 37.0
C07p28310 Brassica napus HOM05D008628 ORTHO05D010443 1.8e-06 56.2 79 36.7
BolC7t43371H Brassica oleracea HOM05D008628 ORTHO05D010443 1.8e-06 56.2 79 36.7
Oeu017848.1 Olea europaea HOM05D001004 ORTHO05D000653 1.8e-06 56.2 86 40.7
Peaxi162Scf79264g00001 Petunia axillaris HOM05D008628 ORTHO05D010443 1.8e-06 56.2 63 49.2
Sp2g10200 Schrenkiella parvula HOM05D008628 ORTHO05D010443 1.8e-06 56.2 80 36.2
BolC3t14835H Brassica oleracea HOM05D001004 ORTHO05D000653 2.4e-06 55.8 85 37.6
Eucgr.F04168 Eucalyptus grandis HOM05D001004 ORTHO05D000653 3.1e-06 55.5 91 39.6
Thhalv10010855m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 3.1e-06 55.5 78 35.9
RcHm_v2.0_Chr2g0105871 Rosa chinensis HOM05D001004 ORTHO05D000653 4.1e-06 55.1 88 37.5
Migut.D01298 Erythranthe guttata HOM05D009680 ORTHO05D000653 6.9e-06 54.3 85 40.0
Eucgr.H05147 Eucalyptus grandis HOM05D001004 ORTHO05D000653 6.9e-06 54.3 95 40.0


User provided reference genes

Program Settings