Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1509.8 Capsicum annuum HOM05D001277 ORTHO05D000950 1.5e-101 372.9 190 100.0
PGSC0003DMG400039921 Solanum tuberosum HOM05D001277 ORTHO05D000950 5.4e-59 231.5 183 68.9
Solyc10g008260.2 Solanum lycopersicum HOM05D001277 ORTHO05D000950 1.3e-57 226.9 184 68.5
Sopen10g004100 Solanum pennellii HOM05D005990 ORTHO05D000950 2.1e-55 219.5 175 69.1
Sopen10g004130 Solanum pennellii HOM05D001277 ORTHO05D000950 4.8e-55 218.4 192 65.1
Solyc10g008270.3 Solanum lycopersicum HOM05D001277 ORTHO05D000950 2.4e-54 216.1 192 63.5
CAN.G578.14 Capsicum annuum HOM05D001277 ORTHO05D000950 1.3e-52 210.3 168 69.6
Nitab4.5_0006305g0020 Nicotiana tabacum HOM05D001277 ORTHO05D000950 9.6e-48 194.1 188 60.1
Solyc10g008263.1 Solanum lycopersicum HOM05D001277 ORTHO05D000950 4.8e-47 191.8 190 58.4
Solyc10g008247.1 Solanum lycopersicum HOM05D001277 ORTHO05D000950 3.1e-46 189.1 186 58.1
Sopen10g004110 Solanum pennellii HOM05D001277 ORTHO05D000950 4.0e-46 188.7 173 60.7
CAN.G578.9 Capsicum annuum HOM05D001277 ORTHO05D000950 4.0e-38 162.2 116 75.0
PGSC0003DMG400013148 Solanum tuberosum HOM05D001277 ORTHO05D000950 4.3e-32 142.1 116 66.4
Peaxi162Scf00059g01717 Petunia axillaris HOM05D001277 ORTHO05D000950 6.3e-31 138.3 139 54.7
Sopen12g005610 Solanum pennellii HOM05D001277 ORTHO05D000950 4.6e-26 122.1 169 45.0
Peaxi162Scf00008g00815 Petunia axillaris HOM05D001277 ORTHO05D000950 9.0e-22 107.8 116 54.3
Solyc10g008243.1 Solanum lycopersicum HOM05D001277 ORTHO05D000950 1.2e-18 97.4 92 57.6
Oeu017501.1 Olea europaea HOM05D001277 ORTHO05D000950 2.1e-18 96.7 162 39.5
CAN.G1600.2 Capsicum annuum HOM05D001277 ORTHO05D000950 4.6e-18 95.5 128 49.2
PGSC0003DMG400007814 Solanum tuberosum HOM05D001277 ORTHO05D000950 4.6e-18 95.5 114 46.5
Oeu017496.1 Olea europaea HOM05D001277 ORTHO05D000950 1.0e-17 94.4 150 38.7
Cc05_g07320 Coffea canephora HOM05D001277 ORTHO05D000950 1.4e-17 94.0 188 34.6
Nitab4.5_0025245g0010 Nicotiana tabacum HOM05D001277 ORTHO05D000950 1.8e-17 93.6 96 60.4
Solyc12g010585.1 Solanum lycopersicum HOM05D001277 ORTHO05D000950 3.0e-17 92.8 111 45.9
Oeu030708.1 Olea europaea HOM05D001277 ORTHO05D000950 5.1e-17 92.0 161 36.6
Dinv08385 Davidia involucrata HOM05D001277 ORTHO05D000950 1.1e-16 90.9 157 36.9
Migut.M00292 Erythranthe guttata HOM05D001277 ORTHO05D000950 7.4e-16 88.2 163 39.3
Solyc12g010595.1 Solanum lycopersicum HOM05D001277 ORTHO05D000950 7.4e-16 88.2 117 48.7
Dinv08386 Davidia involucrata HOM05D001277 ORTHO05D004973 1.3e-15 87.4 158 39.2
FAN09G2322 Fragaria x ananassa HOM05D001277 ORTHO05D000950 1.7e-15 87.0 163 31.9
Dinv00852 Davidia involucrata HOM05D001277 ORTHO05D000950 4.8e-15 85.5 161 36.6
GSVIVG01020561001 Vitis vinifera HOM05D001277 ORTHO05D000950 4.1e-14 82.4 158 33.5
Cc05_g07300 Coffea canephora HOM05D001277 ORTHO05D000950 1.2e-13 80.9 159 37.7
Cc05_g07310 Coffea canephora HOM05D001277 ORTHO05D000950 2.0e-13 80.1 164 37.2
FvH4_6g26360 Fragaria vesca HOM05D001277 ORTHO05D000950 2.0e-13 80.1 167 29.9
Oeu017500.1 Olea europaea HOM05D001277 ORTHO05D000950 2.6e-13 79.7 164 34.8
CiPaw.03G178400 Carya illinoinensis HOM05D001277 ORTHO05D000950 5.9e-13 78.6 158 34.2
RcHm_v2.0_Chr2g0126861 Rosa chinensis HOM05D001277 ORTHO05D000950 1.3e-12 77.4 161 31.1
QL08p039190 Quercus lobata HOM05D001277 ORTHO05D000950 2.2e-12 76.6 159 34.0
Actinidia11082 Actinidia chinensis HOM05D001277 ORTHO05D000950 5.0e-12 75.5 152 36.8
MSTRG.6796 Avicennia marina HOM05D001277 ORTHO05D000950 6.5e-12 75.1 159 33.3
Rhsim06G0141200 Rhododendron simsii HOM05D001277 ORTHO05D000950 6.5e-12 75.1 161 34.8
Prupe.3G131500 Prunus persica HOM05D001277 ORTHO05D000950 1.4e-11 73.9 159 32.7
Sed0024653 Sechium edule HOM05D001277 ORTHO05D000950 2.5e-11 73.2 155 32.9
Actinidia11081 Actinidia chinensis HOM05D001277 ORTHO05D000950 3.2e-11 72.8 162 34.6
FAN05G0233 Fragaria x ananassa HOM05D001277 ORTHO05D000950 3.2e-11 72.8 164 28.7
Hma1.2p1_0002F.1_g001990 Hydrangea macrophylla HOM05D001277 ORTHO05D000950 3.2e-11 72.8 165 29.1
Atru.chr6.2982 Acer truncatum HOM05D001277 ORTHO05D000950 7.2e-11 71.6 161 27.3
Potri.019G099300 Populus trichocarpa HOM05D001277 ORTHO05D000950 9.4e-11 71.2 155 34.8
Potri.019G099500 Populus trichocarpa HOM05D001277 ORTHO05D000950 9.4e-11 71.2 155 34.8
TWI59G0794 Tripterygium wilfordii HOM05D001277 ORTHO05D000950 1.2e-10 70.9 166 31.3
Ciclev10016466m.g Citrus clementina HOM05D001277 ORTHO05D000950 1.6e-10 70.5 162 29.0
COL.COLO4_36348 Corchorus olitorius HOM05D001277 ORTHO05D000950 1.6e-10 70.5 164 31.7
Cc05_g07290 Coffea canephora HOM05D001277 ORTHO05D000950 2.7e-10 69.7 113 38.9
Sabra19G0110300 Salix brachista HOM05D001277 ORTHO05D000950 7.9e-10 68.2 157 31.8
SalBow7G1009 Salvia bowleyana HOM05D001277 ORTHO05D000950 2.3e-09 66.6 162 31.5
CSS0033518 Camellia sinensis var. sinensis HOM05D001277 ORTHO05D000950 3.9e-09 65.9 168 34.5
Potri.019G099400 Populus trichocarpa HOM05D001277 ORTHO05D000950 3.9e-09 65.9 153 34.6
Gohir.A04G103200 Gossypium hirsutum HOM05D001277 ORTHO05D000950 5.1e-09 65.5 165 27.9
CSS0044106 Camellia sinensis var. sinensis HOM05D001277 ORTHO05D000950 8.8e-09 64.7 168 33.9
CANSAT64G1763 Cannabis sativa HOM05D001277 ORTHO05D000950 8.8e-09 64.7 170 28.8
Potri.013G129800 Populus trichocarpa HOM05D001277 ORTHO05D000950 8.8e-09 64.7 154 31.2
Manes.13G145600 Manihot esculenta HOM05D001277 ORTHO05D000950 1.1e-08 64.3 156 28.8
Lsat_1_v5_gn_3_37760 Lactuca sativa HOM05D001277 ORTHO05D000950 1.5e-08 63.9 174 32.2
Manes.12G088914 Manihot esculenta HOM05D001277 ORTHO05D000950 1.5e-08 63.9 156 29.5
Manes.12G088952 Manihot esculenta HOM05D001277 ORTHO05D000950 1.5e-08 63.9 156 29.5
Glyma.12G205200 Glycine max HOM05D001277 ORTHO05D000950 2.0e-08 63.5 161 31.7
Phvul.011G119500 Phaseolus vulgaris HOM05D001277 ORTHO05D000950 3.3e-08 62.8 159 29.6
CiPaw.04G127400 Carya illinoinensis HOM05D001277 ORTHO05D000950 7.4e-08 61.6 158 28.5
Cpa.g.sc27.35 Carica papaya HOM05D001277 ORTHO05D000950 1.3e-07 60.8 139 28.1
TPR.G6414 Trifolium pratense HOM05D001277 ORTHO05D000950 1.3e-07 60.8 135 30.4
Cpa.g.sc1938.2 Carica papaya HOM05D001277 ORTHO05D000950 1.7e-07 60.5 158 31.6
ClCG07G002820 Citrullus lanatus HOM05D001277 ORTHO05D000950 2.2e-07 60.1 156 30.1
Rhsim02G0131400 Rhododendron simsii HOM05D001277 ORTHO05D000950 2.2e-07 60.1 140 31.4
DCAR_021251 Daucus carota HOM05D001277 ORTHO05D000950 2.8e-07 59.7 107 37.4
HanXRQChr17g0541581 Helianthus annuus HOM05D001277 ORTHO05D000950 3.7e-07 59.3 177 27.7
MD09G1233000 Malus domestica HOM05D001277 ORTHO05D000950 3.7e-07 59.3 170 29.4
TAR629G1074 Trochodendron aralioides HOM05D001277 ORTHO05D000950 3.7e-07 59.3 137 34.3
vmacro15915 Vaccinium macrocarpon HOM05D001277 ORTHO05D000950 3.7e-07 59.3 141 30.5
CSS0045340 Camellia sinensis var. sinensis HOM05D001277 ORTHO05D000950 4.8e-07 58.9 135 35.6
Manes.16G028800 Manihot esculenta HOM05D001277 ORTHO05D000950 4.8e-07 58.9 102 35.3
Sabra13G0107700 Salix brachista HOM05D001277 ORTHO05D000950 6.3e-07 58.5 158 29.7
Sopen12g005590 Solanum pennellii HOM05D001277 ORTHO05D000950 6.3e-07 58.5 160 29.4
ECA246G0285 Erigeron canadensis HOM05D001277 ORTHO05D000950 8.2e-07 58.2 137 32.1
Duzib160G0013 Durio zibethinus HOM05D001277 ORTHO05D000950 1.1e-06 57.8 137 29.9
MD17G1238600 Malus domestica HOM05D001277 ORTHO05D000950 1.1e-06 57.8 176 29.0
Psat5g272640 Pisum sativum HOM05D001277 ORTHO05D000950 1.1e-06 57.8 173 26.0
Gohir.D10G027100 Gossypium hirsutum HOM05D001277 ORTHO05D000950 1.4e-06 57.4 139 27.3
Gorai.011G028400 Gossypium raimondii HOM05D001277 ORTHO05D000950 1.4e-06 57.4 139 27.3
Duzib248G1354 Durio zibethinus HOM05D001277 ORTHO05D000950 1.8e-06 57.0 160 31.2
Gohir.A10G026500 Gossypium hirsutum HOM05D001277 ORTHO05D000950 1.8e-06 57.0 139 26.6
CSS0009069 Camellia sinensis var. sinensis HOM05D001277 ORTHO05D000950 3.1e-06 56.2 147 31.3
CsaV3_6G012850 Cucumis sativus L. HOM05D001277 ORTHO05D000950 3.1e-06 56.2 150 32.0
MD17G1237900 Malus domestica HOM05D001277 ORTHO05D000950 4.1e-06 55.8 141 34.0
MELO3C013627.2 Cucumis melo HOM05D001277 ORTHO05D000950 7.0e-06 55.1 154 29.9
MD17G1238500 Malus domestica HOM05D001277 ORTHO05D000950 7.0e-06 55.1 111 36.0


User provided reference genes

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