Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1503.9 Capsicum annuum HOM05D013589 ORTHO05D009136 3.5e-85 318.2 149 100.0
CAN.G395.31 Capsicum annuum HOM05D013589 ORTHO05D009136 1.3e-71 273.1 149 85.9
CAN.G1077.14 Capsicum annuum HOM05D013589 ORTHO05D009136 2.6e-48 195.7 109 84.4
CAN.G587.82 Capsicum annuum HOM05D013589 ORTHO05D009136 1.2e-37 160.2 122 65.6
CAN.G423.42 Capsicum annuum HOM05D013589 ORTHO05D009136 5.1e-36 154.8 123 65.0
CAN.G206.109 Capsicum annuum HOM05D000635 ORTHO05D000488 7.6e-32 141.0 106 67.0
CAN.G411.37 Capsicum annuum HOM05D013589 ORTHO05D009136 1.9e-30 136.3 83 77.1
CAN.G162.90 Capsicum annuum HOM05D013589 ORTHO05D009136 1.3e-28 130.2 121 57.0
CAN.G1432.1 Capsicum annuum HOM05D013589 ORTHO05D009136 1.2e-26 123.6 123 54.5
CAN.G1432.3 Capsicum annuum HOM05D013589 ORTHO05D009136 1.6e-26 123.2 121 55.4
PGSC0003DMG400024605 Solanum tuberosum HOM05D007685 ORTHO05D009136 2.2e-23 112.8 133 45.9
CAN.G861.24 Capsicum annuum HOM05D013589 ORTHO05D009136 2.9e-23 112.5 80 63.8
CAN.G1203.1 Capsicum annuum HOM05D013589 ORTHO05D009136 1.4e-22 110.2 92 60.9
CAN.G760.4 Capsicum annuum HOM05D007685 ORTHO05D009136 3.2e-22 109.0 118 49.2
CAN.G861.25 Capsicum annuum HOM05D013589 ORTHO05D009136 4.9e-15 85.1 108 50.0
Gohir.A12G258800 Gossypium hirsutum HOM05D000151 ORTHO05D000074 4.8e-10 68.6 103 35.9
DCAR_023003 Daucus carota HOM05D000151 ORTHO05D000074 6.2e-10 68.2 86 39.5
Duzib151G0485 Durio zibethinus HOM05D000151 ORTHO05D000074 8.1e-10 67.8 108 36.1
Dinv27133 Davidia involucrata HOM05D000151 ORTHO05D000074 1.8e-09 66.6 109 33.9
Gohir.D12G260000 Gossypium hirsutum HOM05D000151 ORTHO05D000074 2.4e-09 66.2 103 35.0
Gorai.008G278500 Gossypium raimondii HOM05D000151 ORTHO05D000074 2.4e-09 66.2 103 35.0
Dinv15155 Davidia involucrata HOM05D016402 ORTHO05D016246 3.1e-09 65.9 87 35.6
Aqoxy5G01829 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 4.0e-09 65.5 92 40.2
Thecc.04G266500 Theobroma cacao HOM05D000151 ORTHO05D000074 5.3e-09 65.1 108 34.3
Dinv22134 Davidia involucrata HOM05D007685 ORTHO05D009136 6.9e-09 64.7 91 37.4
SGA_v2.0_scaffold218G42504 Striga asiatica HOM05D007685 ORTHO05D009136 6.9e-09 64.7 113 35.4
CSS0038976 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 1.5e-08 63.5 129 31.0
Migut.H02253 Erythranthe guttata HOM05D007685 ORTHO05D009136 1.5e-08 63.5 104 35.6
CSS0028834 Camellia sinensis var. sinensis HOM05D000151 ORTHO05D000074 2.0e-08 63.2 128 31.2
Dinv22139 Davidia involucrata HOM05D007685 ORTHO05D009136 2.6e-08 62.8 85 41.2
Migut.H00266 Erythranthe guttata HOM05D007685 ORTHO05D009136 2.6e-08 62.8 104 33.7
SGA_v2.0_scaffold70G23609 Striga asiatica HOM05D007685 ORTHO05D009136 2.6e-08 62.8 103 37.9
CAN.G1711.9 Capsicum annuum HOM05D000151 ORTHO05D002065 4.5e-08 62.0 93 38.7
Migut.H01396 Erythranthe guttata HOM05D007685 ORTHO05D009136 4.5e-08 62.0 81 40.7
Actinidia33181 Actinidia chinensis HOM05D000151 ORTHO05D000074 5.8e-08 61.6 104 29.8
Dinv22141 Davidia involucrata HOM05D007685 ORTHO05D009136 5.8e-08 61.6 91 36.3
Aqoxy7G03306 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.7e-07 60.1 114 31.6
Dinv22142 Davidia involucrata HOM05D007685 ORTHO05D009136 2.2e-07 59.7 89 38.2
PGSC0003DMG400009857 Solanum tuberosum HOM05D000151 ORTHO05D000074 2.2e-07 59.7 125 28.0
PGSC0003DMG400018077 Solanum tuberosum HOM05D000151 ORTHO05D000074 2.2e-07 59.7 125 28.0
Aqoxy7G01146 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 2.9e-07 59.3 104 32.7
Migut.K01116 Erythranthe guttata HOM05D007685 ORTHO05D009136 2.9e-07 59.3 84 39.3
Migut.K01121 Erythranthe guttata HOM05D007685 ORTHO05D009136 2.9e-07 59.3 84 39.3
SGA_v2.0_scaffold70G23610 Striga asiatica HOM05D007685 ORTHO05D009136 4.9e-07 58.5 112 36.6
TAR629G2629 Trochodendron aralioides HOM05D000151 ORTHO05D000074 4.9e-07 58.5 92 35.9
Solyc03g113160.1 Solanum lycopersicum HOM05D000151 ORTHO05D000074 6.4e-07 58.2 125 30.4
Sopen03g032220 Solanum pennellii HOM05D000151 ORTHO05D000074 6.4e-07 58.2 125 30.4
Eucgr.H00116 Eucalyptus grandis HOM05D000151 ORTHO05D000074 8.4e-07 57.8 123 33.3
SGA_v2.0_scaffold70G23612 Striga asiatica HOM05D007685 ORTHO05D009136 8.4e-07 57.8 91 37.4
Dinv04305 Davidia involucrata HOM05D000151 ORTHO05D000074 1.1e-06 57.4 76 39.5
FAN12G3235 Fragaria x ananassa HOM05D000151 ORTHO05D000074 1.1e-06 57.4 115 31.3
Gohir.A11G013450 Gossypium hirsutum HOM05D000151 ORTHO05D000074 1.1e-06 57.4 95 33.7
Gorai.007G014000 Gossypium raimondii HOM05D000151 ORTHO05D000074 1.4e-06 57.0 95 33.7
Prupe.1G050400 Prunus persica HOM05D000151 ORTHO05D000074 1.4e-06 57.0 117 31.6
TAR636G3348 Trochodendron aralioides HOM05D000151 ORTHO05D000074 1.4e-06 57.0 98 34.7
Aqoxy7G01778 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.9e-06 56.6 106 34.9
Aqoxy7G03016 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 1.9e-06 56.6 127 30.7
Dinv34063 Davidia involucrata HOM05D000151 ORTHO05D000074 1.9e-06 56.6 106 30.2
PGR031G1584 Punica granatum HOM05D000151 ORTHO05D000074 1.9e-06 56.6 146 26.0
Nitab4.5_0000789g0030 Nicotiana tabacum HOM05D000151 ORTHO05D000074 2.4e-06 56.2 88 34.1
SGA_v2.0_scaffold106G30572 Striga asiatica HOM05D000403 ORTHO05D009136 2.4e-06 56.2 105 33.3
TAR629G0126 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.4e-06 56.2 89 39.3
TAR629G1936 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.4e-06 56.2 93 37.6
TAR636G3671 Trochodendron aralioides HOM05D000151 ORTHO05D000074 2.4e-06 56.2 86 34.9
Dinv05292 Davidia involucrata HOM05D003536 ORTHO05D004233 3.2e-06 55.8 92 33.7
SGA_v2.0_scaffold135G34948 Striga asiatica HOM05D007685 ORTHO05D009136 3.2e-06 55.8 91 33.0
vmacro01454 Vaccinium macrocarpon HOM05D000151 ORTHO05D000074 3.2e-06 55.8 103 37.9
Aqoxy7G03013 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 4.2e-06 55.5 80 37.5
Os12g0152200 Oryza sativa ssp. japonica HOM05D000151 ORTHO05D000074 4.2e-06 55.5 94 34.0
Os12g0153400 Oryza sativa ssp. japonica HOM05D000151 ORTHO05D000074 4.2e-06 55.5 94 34.0
SGA_v2.0_scaffold135G34942 Striga asiatica HOM05D007685 ORTHO05D009136 4.2e-06 55.5 132 29.5
COL.COLO4_29228 Corchorus olitorius HOM05D000151 ORTHO05D000074 5.5e-06 55.1 76 40.8
Dinv12023 Davidia involucrata HOM05D000151 ORTHO05D000074 5.5e-06 55.1 80 40.0
Dinv38937 Davidia involucrata HOM05D000151 ORTHO05D000074 5.5e-06 55.1 88 42.0
Dinv39566 Davidia involucrata HOM05D000151 ORTHO05D000074 5.5e-06 55.1 103 32.0
Duzib052G1217 Durio zibethinus HOM05D000151 ORTHO05D000074 5.5e-06 55.1 85 36.5
Eucgr.H00114 Eucalyptus grandis HOM05D000151 ORTHO05D000074 5.5e-06 55.1 98 31.6
Rhsim09G0105800 Rhododendron simsii HOM05D000151 ORTHO05D000074 5.5e-06 55.1 105 33.3
TWI31G0931 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 5.5e-06 55.1 95 32.6
Aqoxy7G00556 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 7.1e-06 54.7 111 33.3
Aqoxy7G03015 Aquilegia oxysepala HOM05D000151 ORTHO05D000074 7.1e-06 54.7 80 37.5
COL.COLO4_13786 Corchorus olitorius HOM05D000151 ORTHO05D000074 7.1e-06 54.7 106 34.0
Gohir.D11G013633 Gossypium hirsutum HOM05D000151 ORTHO05D000074 7.1e-06 54.7 95 32.6
Rhsim09G0042100 Rhododendron simsii HOM05D000151 ORTHO05D000074 7.1e-06 54.7 117 33.3
PGSC0003DMG400018078 Solanum tuberosum HOM05D000151 ORTHO05D000074 7.1e-06 54.7 125 29.6
TWI53G1253 Tripterygium wilfordii HOM05D000151 ORTHO05D000074 7.1e-06 54.7 124 26.6
Atru.chr2.1462 Acer truncatum HOM05D000048 ORTHO05D000436 9.3e-06 54.3 103 35.0
Os11g0582700 Oryza sativa ssp. japonica HOM05D000151 ORTHO05D000074 9.3e-06 54.3 130 27.7
TAR636G0252 Trochodendron aralioides HOM05D000151 ORTHO05D000074 9.3e-06 54.3 86 33.7


User provided reference genes

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