Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1503.5 Capsicum annuum HOM05D001903 ORTHO05D001847 1.1e-50 203.0 97 100.0
Potri.006G254300 Populus trichocarpa HOM05D001903 ORTHO05D001847 4.2e-23 111.3 87 60.9
Cpa.g.sc10.261 Carica papaya HOM05D001903 ORTHO05D001847 3.5e-22 108.2 70 68.6
AL2G41400 Arabidopsis lyrata HOM05D001903 ORTHO05D001847 1.8e-21 105.9 84 58.3
PGR044G1754 Punica granatum HOM05D001903 ORTHO05D001847 5.1e-21 104.4 80 65.0
AT1G80130 Arabidopsis thaliana HOM05D001903 ORTHO05D001847 8.7e-21 103.6 87 57.5
PGR044G1481 Punica granatum HOM05D001903 ORTHO05D001847 8.7e-21 103.6 80 63.8
C01p06630 Brassica napus HOM05D001903 ORTHO05D001847 4.3e-20 101.3 79 59.5
BcaC09g52017 Brassica carinata HOM05D001903 ORTHO05D001847 8.2e-19 97.1 87 54.0
A01p06030 Brassica napus HOM05D001903 ORTHO05D001847 8.2e-19 97.1 77 59.7
BolC1t00658H Brassica oleracea HOM05D001903 ORTHO05D001847 8.2e-19 97.1 85 56.5
BraA01t00568Z Brassica rapa HOM05D001903 ORTHO05D001847 8.2e-19 97.1 77 59.7
Actinidia14059 Actinidia chinensis HOM05D001903 ORTHO05D001847 1.1e-18 96.7 59 69.5
Thhalv10026052m.g Eutrema salsugineum HOM05D001903 ORTHO05D001847 1.4e-18 96.3 77 59.7
Sp7g30100 Schrenkiella parvula HOM05D001903 ORTHO05D001847 2.4e-18 95.5 77 61.0
Aa31LG4G420 Aethionema arabicum HOM05D001903 ORTHO05D001847 9.0e-18 93.6 76 56.6
Eucgr.C02775 Eucalyptus grandis HOM05D001903 ORTHO05D001847 1.2e-17 93.2 83 56.6
Sabra06G0198700 Salix brachista HOM05D001903 ORTHO05D001847 1.5e-17 92.8 77 57.1
C02p37590 Brassica napus HOM05D001903 ORTHO05D001847 7.6e-17 90.5 76 55.3
BcaC03g16002 Brassica carinata HOM05D001903 ORTHO05D001847 4.9e-16 87.8 76 55.3
BolC2t09769H Brassica oleracea HOM05D001903 ORTHO05D001847 4.9e-16 87.8 76 55.3
CSS0008588 Camellia sinensis var. sinensis HOM05D001903 ORTHO05D001847 1.2e-14 83.2 87 49.4
Hund26517 Selenicereus undatus HOM05D001903 ORTHO05D001847 1.2e-14 83.2 65 60.0
A02p23820 Brassica napus HOM05D001903 ORTHO05D001847 2.1e-14 82.4 76 51.3
BraA02t07373Z Brassica rapa HOM05D001903 ORTHO05D001847 2.1e-14 82.4 76 51.3
Sp5g35670 Schrenkiella parvula HOM05D001903 ORTHO05D001847 6.0e-14 80.9 85 50.6
Nitab4.5_0000209g0150 Nicotiana tabacum HOM05D001903 ORTHO05D001847 1.0e-13 80.1 59 54.2
Nitab4.5_0000373g0030 Nicotiana tabacum HOM05D001903 ORTHO05D001847 1.0e-13 80.1 84 53.6
AUR62016344 Chenopodium quinoa HOM05D001903 ORTHO05D001847 3.0e-13 78.6 57 56.1
Lj9C500G15 Lonicera japonica HOM05D000020 ORTHO05D000543 3.0e-13 78.6 61 59.0
Carub.0002s2739 Capsella rubella HOM05D001903 ORTHO05D001847 5.1e-13 77.8 76 50.0
Rhsim03G0248500 Rhododendron simsii HOM05D001903 ORTHO05D001847 4.3e-12 74.7 49 65.3
BcaB05g25297 Brassica carinata HOM05D001903 ORTHO05D001847 9.7e-12 73.6 66 51.5
COL.COLO4_18856 Corchorus olitorius HOM05D001903 ORTHO05D001847 9.7e-12 73.6 64 48.4
Aa31LG2G18260 Aethionema arabicum HOM05D001903 ORTHO05D001847 2.8e-11 72.0 60 55.0
BcaC08g47574 Brassica carinata HOM05D001903 ORTHO05D001847 1.1e-10 70.1 87 41.4
C06p54220 Brassica napus HOM05D001903 ORTHO05D001847 1.1e-10 70.1 87 41.4
BolC6t40435H Brassica oleracea HOM05D001903 ORTHO05D001847 1.1e-10 70.1 87 41.4
Hma1.2p1_0018F.1_g012310 Hydrangea macrophylla HOM05D001903 ORTHO05D001847 1.4e-10 69.7 42 71.4
THA.LOC104803660 Tarenaya hassleriana HOM05D001903 ORTHO05D001847 1.4e-10 69.7 87 44.8
QL04p082607 Quercus lobata HOM05D010056 ORTHO05D001888 3.1e-10 68.6 43 65.1
Nitab4.5_0011590g0020 Nicotiana tabacum HOM05D001903 ORTHO05D001847 4.1e-10 68.2 51 58.8
AUR62011143 Chenopodium quinoa HOM05D001903 ORTHO05D001847 5.3e-10 67.8 41 70.7
Migut.E00789 Erythranthe guttata HOM05D001903 ORTHO05D001847 5.3e-10 67.8 88 42.0
Gorai.010G137200 Gossypium raimondii HOM05D001903 ORTHO05D001847 9.0e-10 67.0 59 50.8
CARHR074370 Cardamine hirsuta HOM05D001903 ORTHO05D001847 1.5e-09 66.2 76 43.4
Lalb_Chr06g0169541 Lupinus albus HOM05D006910 ORTHO05D008937 2.0e-09 65.9 77 40.3
EL10Ac2g04227 Beta vulgaris HOM05D001903 ORTHO05D001847 2.6e-09 65.5 54 53.7
Gohir.D06G119399 Gossypium hirsutum HOM05D001903 ORTHO05D001847 3.4e-09 65.1 49 57.1
THA.LOC104801064 Tarenaya hassleriana HOM05D006910 ORTHO05D008937 5.9e-09 64.3 86 33.7
CDE04G0657 Ceratophyllum demersum HOM05D001903 ORTHO05D001847 1.3e-08 63.2 55 50.9
BcaB02g08699 Brassica carinata HOM05D001903 ORTHO05D001847 1.7e-08 62.8 87 40.2
Thhalv10018894m.g Eutrema salsugineum HOM05D001903 ORTHO05D001847 1.7e-08 62.8 76 40.8
Actinidia07422 Actinidia chinensis HOM05D001903 ORTHO05D001847 2.9e-08 62.0 86 40.7
Sp1g03360 Schrenkiella parvula HOM05D006910 ORTHO05D008937 2.9e-08 62.0 86 34.9
BraA10t42564Z Brassica rapa HOM05D006910 ORTHO05D008937 3.8e-08 61.6 83 34.9
ClCG05G003960 Citrullus lanatus HOM05D006910 ORTHO05D008937 5.0e-08 61.2 73 38.4
CsaV3_3G011640 Cucumis sativus L. HOM05D006910 ORTHO05D008937 6.5e-08 60.8 73 37.0
CARHR003870 Cardamine hirsuta HOM05D006910 ORTHO05D008937 8.5e-08 60.5 90 36.7
Nitab4.5_0000592g0430 Nicotiana tabacum HOM05D006910 ORTHO05D008937 1.1e-07 60.1 58 44.8
CSS0021483 Camellia sinensis var. sinensis HOM05D006910 ORTHO05D008937 1.4e-07 59.7 89 39.3
Duzib150G1231 Durio zibethinus HOM05D001903 ORTHO05D001847 1.4e-07 59.7 50 52.0
Cfa010644 Carpinus fangiana HOM05D001903 ORTHO05D001847 2.5e-07 58.9 41 58.5
Carub.0001s0374 Capsella rubella HOM05D006910 ORTHO05D008937 3.2e-07 58.5 86 33.7
Carub.0007s0824 Capsella rubella HOM05D001903 ORTHO05D001847 4.2e-07 58.2 77 42.9
Thhalv10008199m.g Eutrema salsugineum HOM05D006910 ORTHO05D008937 4.2e-07 58.2 73 38.4
FAN22G1859 Fragaria x ananassa HOM05D006910 ORTHO05D008937 4.2e-07 58.2 60 43.3
C05p02700 Brassica napus HOM05D006910 ORTHO05D008937 5.5e-07 57.8 75 36.0
BolC5t29051H Brassica oleracea HOM05D006910 ORTHO05D008937 5.5e-07 57.8 75 36.0
Ca_01059_v3 Cicer arietinum L. HOM05D001903 ORTHO05D001847 5.5e-07 57.8 44 50.0
A07p45380 Brassica napus HOM05D001903 ORTHO05D001847 1.2e-06 56.6 59 44.1
Thecc.09G025100 Theobroma cacao HOM05D001903 ORTHO05D001847 1.2e-06 56.6 42 54.8
AL1G14180 Arabidopsis lyrata HOM05D006910 ORTHO05D008937 1.6e-06 56.2 73 37.0
A10p02950 Brassica napus HOM05D006910 ORTHO05D008937 1.6e-06 56.2 75 34.7
Actinidia37550 Actinidia chinensis HOM05D006910 ORTHO05D008937 2.7e-06 55.5 74 39.2
Hma1.2p1_0366F.1_g136940 Hydrangea macrophylla HOM05D006910 ORTHO05D008937 2.7e-06 55.5 85 34.1
AT4G32340 Arabidopsis thaliana HOM05D001903 ORTHO05D001847 4.6e-06 54.7 85 40.0
CARHR240240 Cardamine hirsuta HOM05D001903 ORTHO05D001847 4.6e-06 54.7 77 41.6


User provided reference genes

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