Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1500.8 Capsicum annuum HOM05D003152 ORTHO05D031617 3.0e-34 147.9 72 100.0
CAN.G61.5 Capsicum annuum HOM05D003152 ORTHO05D031617 3.4e-22 107.8 59 86.4
CAN.G732.11 Capsicum annuum HOM05D003152 ORTHO05D004094 5.7e-09 63.9 33 90.9
Nitab4.5_0000021g1070 Nicotiana tabacum HOM05D003152 ORTHO05D004094 5.7e-09 63.9 33 90.9
Nitab4.5_0004670g0040 Nicotiana tabacum HOM05D003152 ORTHO05D004094 5.7e-09 63.9 33 90.9
Actinidia27454 Actinidia chinensis HOM05D003152 ORTHO05D004094 1.3e-08 62.8 45 71.1
CSS0031797 Camellia sinensis var. sinensis HOM05D003152 ORTHO05D004094 1.3e-08 62.8 45 71.1
Peaxi162Scf00516g00327 Petunia axillaris HOM05D003152 ORTHO05D004094 1.3e-08 62.8 33 87.9
Solyc03g097470.3 Solanum lycopersicum HOM05D003152 ORTHO05D004094 1.3e-08 62.8 33 87.9
Sopen03g028240 Solanum pennellii HOM05D003152 ORTHO05D004094 1.3e-08 62.8 33 87.9
ECA246G1886 Erigeron canadensis HOM05D003152 ORTHO05D004094 2.2e-08 62.0 33 87.9
MSTRG.26221 Avicennia marina HOM05D003152 ORTHO05D004094 2.8e-08 61.6 45 68.9
vmacro14103 Vaccinium macrocarpon HOM05D003152 ORTHO05D004094 2.8e-08 61.6 33 84.8
MSTRG.19706 Avicennia marina HOM05D003152 ORTHO05D004094 3.7e-08 61.2 45 68.9
CSS0013092 Camellia sinensis var. sinensis HOM05D003152 ORTHO05D004094 3.7e-08 61.2 45 68.9
Cc06_g13250 Coffea canephora HOM05D003152 ORTHO05D004094 3.7e-08 61.2 45 68.9
Rhsim07G0104900 Rhododendron simsii HOM05D003152 ORTHO05D004094 3.7e-08 61.2 33 84.8
vmacro06967 Vaccinium macrocarpon HOM05D003152 ORTHO05D004094 3.7e-08 61.2 33 84.8
Actinidia02109 Actinidia chinensis HOM05D003152 ORTHO05D004094 4.8e-08 60.8 45 66.7
SGA_v2.0_scaffold69G23257 Striga asiatica HOM05D003152 ORTHO05D004094 4.8e-08 60.8 33 84.8
ECA233G4900 Erigeron canadensis HOM05D003152 ORTHO05D004094 6.3e-08 60.5 33 84.8
HanXRQChr02g0049441 Helianthus annuus HOM05D003152 ORTHO05D004094 6.3e-08 60.5 33 84.8
HanXRQChr05g0148701 Helianthus annuus HOM05D003152 ORTHO05D004094 6.3e-08 60.5 33 84.8
Lsat_1_v5_gn_6_1880 Lactuca sativa HOM05D003152 ORTHO05D004094 6.3e-08 60.5 33 84.8
SalBow1G3248 Salvia bowleyana HOM05D003152 ORTHO05D004094 6.3e-08 60.5 52 59.6
Lj8C258T8 Lonicera japonica HOM05D003152 ORTHO05D004094 1.1e-07 59.7 33 81.8
Manes.01G076900 Manihot esculenta HOM05D003152 ORTHO05D004094 1.1e-07 59.7 33 81.8
Oeu009849.2 Olea europaea HOM05D003152 ORTHO05D004094 1.1e-07 59.7 45 66.7
Potri.001G120900 Populus trichocarpa HOM05D003152 ORTHO05D004094 1.1e-07 59.7 33 81.8
Rhsim03G0143900 Rhododendron simsii HOM05D003152 ORTHO05D004094 1.1e-07 59.7 32 84.4
SalBow6G1354 Salvia bowleyana HOM05D003152 ORTHO05D004094 1.1e-07 59.7 33 81.8
TWI60G0644 Tripterygium wilfordii HOM05D003152 ORTHO05D004094 1.1e-07 59.7 33 81.8
Ciclev10020462m.g Citrus clementina HOM05D003152 ORTHO05D004094 1.4e-07 59.3 33 81.8
Eucgr.E00458 Eucalyptus grandis HOM05D003152 ORTHO05D004094 1.4e-07 59.3 45 66.7
Oeu002545.1 Olea europaea HOM05D003152 ORTHO05D004094 1.4e-07 59.3 32 84.4
QL06p053048 Quercus lobata HOM05D003152 ORTHO05D004094 1.4e-07 59.3 33 81.8
Sabra01G0093100 Salix brachista HOM05D003152 ORTHO05D004094 1.4e-07 59.3 33 81.8
TWI81G1045 Tripterygium wilfordii HOM05D003152 ORTHO05D004094 1.4e-07 59.3 33 81.8
Ah.02g115360 Amaranthus hybridus HOM05D003152 ORTHO05D004094 1.8e-07 58.9 33 78.8
Aqoxy1G02009 Aquilegia oxysepala HOM05D003152 ORTHO05D004094 1.8e-07 58.9 33 81.8
Aqoxy5G03922 Aquilegia oxysepala HOM05D003152 ORTHO05D004094 1.8e-07 58.9 33 81.8
Cfa012769 Carpinus fangiana HOM05D003152 ORTHO05D004094 1.8e-07 58.9 33 81.8
CiPaw.11G150900 Carya illinoinensis HOM05D003152 ORTHO05D004094 1.8e-07 58.9 33 81.8
Haze_07861 Corylus avellana HOM05D003152 ORTHO05D004094 1.8e-07 58.9 33 81.8
Lsat_1_v5_gn_6_109081 Lactuca sativa HOM05D003152 ORTHO05D004094 1.8e-07 58.9 32 84.4
Manes.02G036200 Manihot esculenta HOM05D003152 ORTHO05D004094 1.8e-07 58.9 33 81.8
Nn2g11781 Nelumbo nucifera HOM05D003152 ORTHO05D004094 1.8e-07 58.9 33 81.8
Nn8g39222 Nelumbo nucifera HOM05D003152 ORTHO05D004094 1.8e-07 58.9 33 81.8
Oeu056513.1 Olea europaea HOM05D003152 ORTHO05D004094 1.8e-07 58.9 33 81.8
TAR629G0380 Trochodendron aralioides HOM05D003152 ORTHO05D004094 1.8e-07 58.9 33 81.8
TAR636G2130 Trochodendron aralioides HOM05D003152 ORTHO05D004094 1.8e-07 58.9 33 81.8
unitig_21.g20649 Utricularia gibba HOM05D003152 ORTHO05D004094 1.8e-07 58.9 33 81.8
GSVIVG01001278001 Vitis vinifera HOM05D003152 ORTHO05D004094 1.8e-07 58.9 33 81.8
GSVIVG01004779001 Vitis vinifera HOM05D003152 ORTHO05D004094 1.8e-07 58.9 33 81.8
CANSAT21G0390 Cannabis sativa HOM05D003152 ORTHO05D004094 2.4e-07 58.5 33 78.8
CiPaw.12G107100 Carya illinoinensis HOM05D003152 ORTHO05D004094 2.4e-07 58.5 33 78.8
Ah.12g062230 Amaranthus hybridus HOM05D003152 ORTHO05D004094 3.1e-07 58.2 33 78.8
ClCG01G003860 Citrullus lanatus HOM05D003152 ORTHO05D004094 3.1e-07 58.2 33 78.8
MELO3C005558.2 Cucumis melo HOM05D003152 ORTHO05D004094 3.1e-07 58.2 33 78.8
CsaV3_5G003990 Cucumis sativus L. HOM05D003152 ORTHO05D004094 3.1e-07 58.2 33 78.8
Prupe.5G075100 Prunus persica HOM05D003152 ORTHO05D004094 3.1e-07 58.2 33 78.8
arahy.Tifrunner.gnm1.ann1.EZ70MQ Arachis hypogaea HOM05D003152 ORTHO05D004094 4.1e-07 57.8 32 78.1
arahy.Tifrunner.gnm1.ann1.UBEE9G Arachis hypogaea HOM05D003152 ORTHO05D004094 4.1e-07 57.8 32 78.1
FvH4_5g00250 Fragaria vesca HOM05D003152 ORTHO05D004094 4.1e-07 57.8 33 78.8
FAN04G1135 Fragaria x ananassa HOM05D003152 ORTHO05D004094 4.1e-07 57.8 33 78.8
FAN08G1487 Fragaria x ananassa HOM05D003152 ORTHO05D004094 4.1e-07 57.8 33 78.8
FAN13G2916 Fragaria x ananassa HOM05D003152 ORTHO05D004094 4.1e-07 57.8 33 78.8
FAN18G0254 Fragaria x ananassa HOM05D003152 ORTHO05D004094 4.1e-07 57.8 33 78.8
SHI20570 Sapria himalayana HOM05D003152 ORTHO05D004094 4.1e-07 57.8 33 78.8
Lj8C337T1 Lonicera japonica HOM05D003152 ORTHO05D004094 5.3e-07 57.4 33 75.8
Glyma.09G277400 Glycine max HOM05D003152 ORTHO05D004094 6.9e-07 57.0 44 61.4
Glyma.18G211400 Glycine max HOM05D003152 ORTHO05D004094 6.9e-07 57.0 44 61.4
Peaxi162Scf01440g00025 Petunia axillaris HOM05D003152 ORTHO05D020396 6.9e-07 57.0 34 76.5
VMungo1383G1558 Vigna mungo HOM05D003152 ORTHO05D004094 6.9e-07 57.0 44 61.4
AL2G13230 Arabidopsis lyrata HOM05D003152 ORTHO05D004094 9.1e-07 56.6 33 78.8
AT1G62640 Arabidopsis thaliana HOM05D003152 ORTHO05D004094 9.1e-07 56.6 33 78.8
BcaB07g31342 Brassica carinata HOM05D003152 ORTHO05D004094 9.1e-07 56.6 33 78.8
BcaC04g22425 Brassica carinata HOM05D003152 ORTHO05D004094 9.1e-07 56.6 33 78.8
BcaC04g22757 Brassica carinata HOM05D003152 ORTHO05D004094 9.1e-07 56.6 33 78.8
A09p13150 Brassica napus HOM05D003152 ORTHO05D004094 9.1e-07 56.6 33 78.8
A09p16150 Brassica napus HOM05D003152 ORTHO05D004094 9.1e-07 56.6 33 78.8
C09p15600 Brassica napus HOM05D003152 ORTHO05D004094 9.1e-07 56.6 33 78.8
C09p19490 Brassica napus HOM05D003152 ORTHO05D004094 9.1e-07 56.6 33 78.8
BolC9t54465H Brassica oleracea HOM05D003152 ORTHO05D004094 9.1e-07 56.6 33 78.8
BolC9t54852H Brassica oleracea HOM05D003152 ORTHO05D004094 9.1e-07 56.6 33 78.8
BraA09t36961Z Brassica rapa HOM05D003152 ORTHO05D004094 9.1e-07 56.6 33 78.8
BraA09t37250Z Brassica rapa HOM05D003152 ORTHO05D004094 9.1e-07 56.6 33 78.8
CARHR049250 Cardamine hirsuta HOM05D003152 ORTHO05D004094 9.1e-07 56.6 33 78.8
Cpa.g.sc29.131 Carica papaya HOM05D003152 ORTHO05D004094 9.1e-07 56.6 33 78.8
Dinv39108 Davidia involucrata HOM05D003152 ORTHO05D004094 9.1e-07 56.6 45 66.7
Migut.J01479 Erythranthe guttata HOM05D003152 ORTHO05D004094 9.1e-07 56.6 33 78.8
Thhalv10023499m.g Eutrema salsugineum HOM05D003152 ORTHO05D004094 9.1e-07 56.6 33 78.8
Lj3g0024855 Lotus japonicus HOM05D003152 ORTHO05D004094 9.1e-07 56.6 32 75.0
PSO063G1414 Papaver somniferum HOM05D003152 ORTHO05D004094 9.1e-07 56.6 33 78.8
PSO782G4661 Papaver somniferum HOM05D003152 ORTHO05D004094 9.1e-07 56.6 33 78.8
Sp2g02000 Schrenkiella parvula HOM05D003152 ORTHO05D004094 9.1e-07 56.6 33 78.8
THA.LOC104823549 Tarenaya hassleriana HOM05D003152 ORTHO05D004094 9.1e-07 56.6 33 78.8
arahy.Tifrunner.gnm1.ann1.F63DWU Arachis hypogaea HOM05D003152 ORTHO05D031617 1.2e-06 56.2 32 75.0
Nitab4.5_0000011g0260 Nicotiana tabacum HOM05D003152 ORTHO05D004094 1.2e-06 56.2 32 78.1
Nitab4.5_0001108g0030 Nicotiana tabacum HOM05D003152 ORTHO05D004094 1.2e-06 56.2 34 73.5
Phvul.008G086600 Phaseolus vulgaris HOM05D003152 ORTHO05D004094 1.2e-06 56.2 44 61.4
Sc19g0002810 Simmondsia chinensis HOM05D003152 ORTHO05D004094 1.2e-06 56.2 33 75.8
arahy.Tifrunner.gnm1.ann1.AX7FJG Arachis hypogaea HOM05D003152 ORTHO05D004094 1.5e-06 55.8 32 75.0
arahy.Tifrunner.gnm1.ann1.U0ISBZ Arachis hypogaea HOM05D003152 ORTHO05D004094 1.5e-06 55.8 32 75.0
CAN.G285.10 Capsicum annuum HOM05D003152 ORTHO05D004094 1.5e-06 55.8 32 78.1
Sed0001437 Sechium edule HOM05D003152 ORTHO05D004094 1.5e-06 55.8 33 75.8
Sopen08g002520 Solanum pennellii HOM05D003152 ORTHO05D004094 1.5e-06 55.8 32 78.1
PGSC0003DMG400026308 Solanum tuberosum HOM05D003152 ORTHO05D004094 1.5e-06 55.8 32 78.1
Carub.0002s0233 Capsella rubella HOM05D003152 ORTHO05D004094 2.0e-06 55.5 33 75.8
Peaxi162Scf00133g00053 Petunia axillaris HOM05D003152 ORTHO05D004094 2.0e-06 55.5 32 78.1
THA.LOC104809460 Tarenaya hassleriana HOM05D003152 ORTHO05D004094 2.0e-06 55.5 33 75.8
Dinv21605 Davidia involucrata HOM05D003152 ORTHO05D004094 2.6e-06 55.1 33 78.8
PGR042G2869 Punica granatum HOM05D003152 ORTHO05D004094 2.6e-06 55.1 45 62.2
Aa31LG2G230 Aethionema arabicum HOM05D003152 ORTHO05D004094 3.4e-06 54.7 33 75.8
CDE09G1199 Ceratophyllum demersum HOM05D003152 ORTHO05D004094 3.4e-06 54.7 32 78.1
CDE11G1032 Ceratophyllum demersum HOM05D003152 ORTHO05D004094 3.4e-06 54.7 32 78.1
Glyma.15G003100 Glycine max HOM05D003152 ORTHO05D046704 3.4e-06 54.7 57 49.1
Hma1.2p1_1414F.1_g281900 Hydrangea macrophylla HOM05D003152 ORTHO05D004094 3.4e-06 54.7 33 75.8
QL12p013407 Quercus lobata HOM05D003152 ORTHO05D004094 3.4e-06 54.7 33 75.8
Atru.chr9.1375 Acer truncatum HOM05D003152 ORTHO05D004094 4.5e-06 54.3 33 75.8
Lalb_Chr00c36g0408951 Lupinus albus HOM05D003152 ORTHO05D004094 4.5e-06 54.3 38 68.4
PSO170G2789 Papaver somniferum HOM05D003152 ORTHO05D004094 4.5e-06 54.3 33 72.7
RcHm_v2.0_Chr7g0202391 Rosa chinensis HOM05D003152 ORTHO05D004094 4.5e-06 54.3 33 75.8
AUR62011765 Chenopodium quinoa HOM05D003152 ORTHO05D004094 5.9e-06 53.9 33 69.7
AUR62024611 Chenopodium quinoa HOM05D003152 ORTHO05D004094 5.9e-06 53.9 33 69.7
Duzib084G0469 Durio zibethinus HOM05D003152 ORTHO05D004094 5.9e-06 53.9 32 75.0
Lalb_Chr00c36g0408821 Lupinus albus HOM05D003152 ORTHO05D004094 5.9e-06 53.9 32 75.0
Lalb_Chr22g0349441 Lupinus albus HOM05D003152 ORTHO05D004094 5.9e-06 53.9 32 75.0
Lalb_Chr24g0392881 Lupinus albus HOM05D003152 ORTHO05D004094 5.9e-06 53.9 32 75.0
Solyc08g006560.3 Solanum lycopersicum HOM05D003152 ORTHO05D004094 5.9e-06 53.9 32 75.0
Ca_01015_v3 Cicer arietinum L. HOM05D003152 ORTHO05D004094 7.7e-06 53.5 32 68.8
Peaxi162Scf02044g00012 Petunia axillaris HOM05D003152 ORTHO05D004094 7.7e-06 53.5 32 75.0


User provided reference genes

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