Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G15.19 Capsicum annuum HOM05D007415 ORTHO05D009324 1.3e-151 539.7 256 100.0
Sopen09g012680 Solanum pennellii HOM05D007415 ORTHO05D009324 1.9e-123 446.0 253 83.4
Solyc09g018950.3 Solanum lycopersicum HOM05D007415 ORTHO05D009324 9.4e-123 443.7 255 82.4
Nitab4.5_0011643g0030 Nicotiana tabacum HOM05D007415 ORTHO05D009324 5.0e-116 421.4 253 79.8
Nitab4.5_0010771g0010 Nicotiana tabacum HOM05D007415 ORTHO05D009324 1.2e-101 373.6 253 73.5
Peaxi162Scf00424g00066 Petunia axillaris HOM05D007415 ORTHO05D009324 9.4e-99 364.0 222 79.7
Oeu058216.1 Olea europaea HOM05D007415 ORTHO05D009324 4.5e-85 318.5 263 62.7
Dinv02951 Davidia involucrata HOM05D007415 ORTHO05D009324 1.7e-84 316.6 260 60.4
Atru.chr6.3473 Acer truncatum HOM05D007415 ORTHO05D009324 2.3e-81 306.2 250 61.2
CSS0038002 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 3.0e-81 305.8 260 60.0
Migut.D00758 Erythranthe guttata HOM05D007415 ORTHO05D009324 4.0e-81 305.4 263 59.3
Gohir.D07G201100 Gossypium hirsutum HOM05D007415 ORTHO05D009324 8.9e-81 304.3 247 61.1
Gorai.001G225800 Gossypium raimondii HOM05D007415 ORTHO05D009324 8.9e-81 304.3 247 61.1
Ciclev10016323m.g Citrus clementina HOM05D007415 ORTHO05D009324 1.5e-80 303.5 260 58.5
MSTRG.21289 Avicennia marina HOM05D007415 ORTHO05D009324 9.8e-80 300.8 261 60.9
Cfa006296 Carpinus fangiana HOM05D007415 ORTHO05D009324 4.9e-79 298.5 261 58.2
Cc01_g15740 Coffea canephora HOM05D007415 ORTHO05D009324 4.9e-79 298.5 263 57.0
Potri.014G197700 Populus trichocarpa HOM05D007415 ORTHO05D009324 4.9e-79 298.5 267 56.6
Thecc.01G204000 Theobroma cacao HOM05D007415 ORTHO05D009324 4.9e-79 298.5 247 60.7
CANSAT11G1932 Cannabis sativa HOM05D007415 ORTHO05D009324 1.1e-78 297.4 254 58.3
COL.COLO4_19724 Corchorus olitorius HOM05D007415 ORTHO05D009324 1.4e-78 297.0 247 60.3
Manes.12G058800 Manihot esculenta HOM05D007415 ORTHO05D009324 1.9e-78 296.6 247 59.9
Prupe.8G267300 Prunus persica HOM05D007415 ORTHO05D009324 1.9e-78 296.6 261 57.5
Lsat_1_v5_gn_9_15740 Lactuca sativa HOM05D007415 ORTHO05D009324 1.7e-76 290.0 259 55.2
HanXRQChr08g0230811 Helianthus annuus HOM05D007415 ORTHO05D009324 3.9e-76 288.9 256 56.2
CiPaw.07G119000 Carya illinoinensis HOM05D007415 ORTHO05D009324 5.0e-76 288.5 269 56.5
MD11G1318200 Malus domestica HOM05D007415 ORTHO05D009324 5.0e-76 288.5 263 55.9
PGR044G2664 Punica granatum HOM05D007415 ORTHO05D009324 8.6e-76 287.7 241 61.0
Actinidia23816 Actinidia chinensis HOM05D007415 ORTHO05D009324 1.1e-75 287.3 253 58.1
MD03G1298900 Malus domestica HOM05D007415 ORTHO05D009324 6.2e-74 281.6 263 54.8
vmacro14670 Vaccinium macrocarpon HOM05D007415 ORTHO05D009324 8.0e-74 281.2 263 56.7
CsaV3_1G007790 Cucumis sativus L. HOM05D007415 ORTHO05D009324 9.8e-72 274.2 255 54.5
Eucgr.K02344 Eucalyptus grandis HOM05D007415 ORTHO05D009324 2.2e-71 273.1 258 55.0
MELO3C002194.2 Cucumis melo HOM05D007415 ORTHO05D009324 2.9e-71 272.7 252 54.0
CSS0018954 Camellia sinensis var. sinensis HOM05D007415 ORTHO05D009324 4.9e-71 271.9 228 60.5
Sc05g0001580 Simmondsia chinensis HOM05D007415 ORTHO05D009324 6.0e-69 265.0 230 56.5
Rhsim01G0246200 Rhododendron simsii HOM05D007415 ORTHO05D009324 1.7e-68 263.5 258 54.7
Sed0017664 Sechium edule HOM05D007415 ORTHO05D009324 3.9e-68 262.3 255 53.3
arahy.Tifrunner.gnm1.ann1.HL0ERI Arachis hypogaea HOM05D007415 ORTHO05D009324 5.1e-68 261.9 261 54.4
Lj1g0001063 Lotus japonicus HOM05D007415 ORTHO05D009324 8.6e-68 261.2 270 52.6
arahy.Tifrunner.gnm1.ann1.YL0UD8 Arachis hypogaea HOM05D007415 ORTHO05D009324 1.5e-67 260.4 261 54.4
TAR636G2599 Trochodendron aralioides HOM05D007415 ORTHO05D009324 7.3e-67 258.1 253 52.2
ClCG01G014510 Citrullus lanatus HOM05D007415 ORTHO05D009324 1.6e-66 256.9 270 50.0
VMungo1309G2266 Vigna mungo HOM05D007415 ORTHO05D009324 4.7e-66 255.4 245 54.3
Psat5g001880 Pisum sativum HOM05D007415 ORTHO05D009324 1.1e-65 254.2 249 53.0
Glyma.04G002800 Glycine max HOM05D007415 ORTHO05D009324 2.3e-65 253.1 259 50.6
QL03p044140 Quercus lobata HOM05D007415 ORTHO05D009324 2.3e-65 253.1 374 40.1
PGSC0003DMG400020290 Solanum tuberosum HOM05D007415 ORTHO05D009324 2.3e-65 253.1 138 84.8
Aa31sc565G30 Aethionema arabicum HOM05D007415 ORTHO05D009324 4.0e-65 252.3 254 52.4
SalBow6G5534 Salvia bowleyana HOM05D007415 ORTHO05D009324 8.9e-65 251.1 318 47.8
THA.LOC104808823 Tarenaya hassleriana HOM05D007415 ORTHO05D009324 4.4e-64 248.8 267 50.6
Nn4g24568 Nelumbo nucifera HOM05D007415 ORTHO05D009324 1.7e-63 246.9 238 52.1
TWI36G0361 Tripterygium wilfordii HOM05D007415 ORTHO05D009324 4.9e-63 245.4 246 52.0
Gohir.A07G194700 Gossypium hirsutum HOM05D007415 ORTHO05D009324 2.4e-62 243.0 199 59.8
SHI10204 Sapria himalayana HOM05D007415 ORTHO05D009324 2.1e-61 240.0 234 54.3
Duzib133G1418 Durio zibethinus HOM05D007415 ORTHO05D009324 4.6e-61 238.8 245 52.2
PSO675G4429 Papaver somniferum HOM05D007415 ORTHO05D009324 1.0e-60 237.7 269 47.6
Carub.0007s3006 Capsella rubella HOM05D007415 ORTHO05D009324 1.3e-60 237.3 248 50.4
Medtr3g118090 Medicago truncatula HOM05D007415 ORTHO05D009324 2.3e-60 236.5 262 46.6
Sp7g09150 Schrenkiella parvula HOM05D007415 ORTHO05D009324 3.9e-60 235.7 259 48.6
Thhalv10026014m.g Eutrema salsugineum HOM05D007415 ORTHO05D009324 1.5e-59 233.8 259 48.6
DCAR_012712 Daucus carota HOM05D006570 ORTHO05D008193 5.6e-59 231.9 254 48.0
AL9U11890 Arabidopsis lyrata HOM05D007415 ORTHO05D009324 1.6e-58 230.3 246 50.0
AT4G12760 Arabidopsis thaliana HOM05D007415 ORTHO05D009324 3.6e-58 229.2 248 50.4
CARHR218100 Cardamine hirsuta HOM05D007415 ORTHO05D009324 6.2e-58 228.4 248 50.0
unitig_61.g26009 Utricularia gibba HOM05D007415 ORTHO05D009324 6.2e-58 228.4 249 50.6
BcaB04g17744 Brassica carinata HOM05D007415 ORTHO05D009324 1.4e-57 227.3 261 46.4
ECA247G1801 Erigeron canadensis HOM05D007415 ORTHO05D009324 1.4e-57 227.3 262 47.3
Hund02818 Selenicereus undatus HOM05D007415 ORTHO05D009324 1.8e-57 226.9 197 60.9
Cpa.g.sc8.12 Carica papaya HOM05D007415 ORTHO05D009324 3.1e-57 226.1 209 55.0
GSVIVG01038257001 Vitis vinifera HOM05D007415 ORTHO05D009324 5.2e-57 225.3 231 47.6
Aqoxy4G00006 Aquilegia oxysepala HOM05D007415 ORTHO05D009324 6.8e-57 224.9 246 46.7
BcaC07g37433 Brassica carinata HOM05D007415 ORTHO05D009324 5.8e-56 221.9 247 46.6
C08p09070 Brassica napus HOM05D007415 ORTHO05D009324 5.8e-56 221.9 247 46.6
BolC8t47754H Brassica oleracea HOM05D007415 ORTHO05D009324 5.8e-56 221.9 247 46.6
BraA08t32753Z Brassica rapa HOM05D007415 ORTHO05D009324 5.8e-56 221.9 245 46.5
EL10Ac5g10567 Beta vulgaris HOM05D007415 ORTHO05D009324 3.8e-55 219.2 198 56.6
Lj1C108T7 Lonicera japonica HOM05D007415 ORTHO05D009324 3.2e-54 216.1 177 61.6
Lalb_Chr11g0061191 Lupinus albus HOM05D007415 ORTHO05D009324 3.5e-53 212.6 173 60.1
A08p07370 Brassica napus HOM05D007415 ORTHO05D009324 1.0e-52 211.1 272 42.3
Sabra14G0132700 Salix brachista HOM05D007415 ORTHO05D009324 2.3e-52 209.9 326 40.8
MBI10_g35389_MAGBIO Magnolia biondii HOM05D007415 ORTHO05D009324 2.5e-51 206.5 238 47.5
CDE04G2941 Ceratophyllum demersum HOM05D007415 ORTHO05D009324 3.3e-51 206.1 232 45.7
Os05g0417300 Oryza sativa ssp. japonica HOM05D007415 ORTHO05D009324 1.1e-49 201.1 233 45.9
Duzib138G0016 Durio zibethinus HOM05D007415 ORTHO05D009324 2.6e-48 196.4 243 46.5
Phvul.009G118400 Phaseolus vulgaris HOM05D007415 ORTHO05D009324 9.9e-48 194.5 259 44.4
Glyma.06G002800 Glycine max HOM05D007415 ORTHO05D009324 1.9e-46 190.3 206 49.5
AUR62028622 Chenopodium quinoa HOM05D007415 ORTHO05D009324 4.2e-46 189.1 252 42.5
AUR62008047 Chenopodium quinoa HOM05D007415 ORTHO05D009324 2.1e-45 186.8 252 42.9
PSO732G0601 Papaver somniferum HOM05D007415 ORTHO05D009324 6.6e-44 181.8 271 39.9
ATR0743G053 Amborella trichopoda HOM05D007415 ORTHO05D009324 3.1e-41 172.9 235 40.0
Ca_15292_v3 Cicer arietinum L. HOM05D007415 ORTHO05D009324 9.0e-33 144.8 153 49.7
TPR.G38565 Trifolium pratense HOM05D007415 ORTHO05D009324 1.5e-27 127.5 244 36.1
PGSC0003DMG400007530 Solanum tuberosum HOM05D007415 ORTHO05D009324 1.6e-26 124.0 85 72.9
HPP92_001921 Vanilla planifolia HOM05D007415 ORTHO05D009324 1.8e-25 120.6 174 40.2
Haze_04514 Corylus avellana HOM05D007415 ORTHO05D009324 2.4e-25 120.2 141 48.9
Mapoly0134s0003 Marchantia polymorpha HOM05D007415 ORTHO05D009324 4.5e-24 115.9 258 31.0
SalBow2G2324 Salvia bowleyana HOM05D007415 ORTHO05D009324 1.1e-19 101.3 264 32.2
Ah.11g050670 Amaranthus hybridus HOM05D007415 ORTHO05D009324 2.5e-19 100.1 218 34.4
Pp3c1_28310 Physcomitrium patens HOM05D007415 ORTHO05D009324 3.1e-17 93.2 200 29.5
DCAR_017283 Daucus carota HOM05D007415 ORTHO05D009324 6.9e-17 92.0 133 42.9
AagrBONN_evm.TU.Sc2ySwM_362.2902 Anthoceros agrestis HOM05D007415 ORTHO05D009324 4.5e-16 89.4 167 32.3
SMO356G0522 Selaginella moellendorffii HOM05D007415 ORTHO05D009324 5.5e-14 82.4 240 28.8
Zm00001eb288240 Zea mays HOM05D007415 ORTHO05D009324 3.0e-12 76.6 112 38.4


User provided reference genes

Program Settings