Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1490.7 Capsicum annuum HOM05D003659 ORTHO05D004298 2.6e-46 188.3 95 100.0
PGSC0003DMG400014120 Solanum tuberosum HOM05D003659 ORTHO05D004298 4.9e-08 61.2 44 70.5
Solyc03g117020.4 Solanum lycopersicum HOM05D003659 ORTHO05D004298 6.3e-08 60.8 44 68.2
Sopen03g035920 Solanum pennellii HOM05D003659 ORTHO05D004298 6.3e-08 60.8 44 68.2
Peaxi162Scf00332g00435 Petunia axillaris HOM05D003659 ORTHO05D004298 8.3e-08 60.5 44 68.2
Dinv23291 Davidia involucrata HOM05D003659 ORTHO05D004298 1.1e-07 60.1 44 68.2
unitig_0.g1106 Utricularia gibba HOM05D003659 ORTHO05D004298 1.4e-07 59.7 44 65.9
Actinidia08946 Actinidia chinensis HOM05D003659 ORTHO05D004298 1.8e-07 59.3 44 68.2
ATR0739G101 Amborella trichopoda HOM05D003659 ORTHO05D004298 1.8e-07 59.3 44 65.9
Aqoxy7G01595 Aquilegia oxysepala HOM05D003659 ORTHO05D004298 1.8e-07 59.3 44 65.9
MSTRG.22794 Avicennia marina HOM05D003659 ORTHO05D004298 1.8e-07 59.3 44 65.9
CSS0027457 Camellia sinensis var. sinensis HOM05D003659 ORTHO05D004298 1.8e-07 59.3 44 65.9
CSS0033149 Camellia sinensis var. sinensis HOM05D003659 ORTHO05D004298 1.8e-07 59.3 44 65.9
CAN.G407.57 Capsicum annuum HOM05D003659 ORTHO05D004298 1.8e-07 59.3 44 65.9
Haze_21430 Corylus avellana HOM05D003659 ORTHO05D004298 1.8e-07 59.3 47 61.7
Nn2g12325 Nelumbo nucifera HOM05D003659 ORTHO05D004298 1.8e-07 59.3 44 65.9
Os08g0278900 Oryza sativa ssp. japonica HOM05D003659 ORTHO05D004298 1.8e-07 59.3 44 63.6
Rhsim08G0207200 Rhododendron simsii HOM05D003659 ORTHO05D004298 1.8e-07 59.3 44 65.9
SGA_v2.0_scaffold5G02776 Striga asiatica HOM05D003659 ORTHO05D004298 1.8e-07 59.3 44 65.9
vmacro19047 Vaccinium macrocarpon HOM05D003659 ORTHO05D004298 1.8e-07 59.3 44 65.9
MSTRG.11175 Avicennia marina HOM05D003659 ORTHO05D004298 2.4e-07 58.9 44 65.9
MSTRG.9405 Avicennia marina HOM05D003659 ORTHO05D004298 2.4e-07 58.9 44 63.6
CDE02G2060 Ceratophyllum demersum HOM05D003659 ORTHO05D004298 2.4e-07 58.9 44 65.9
CDE05G0949 Ceratophyllum demersum HOM05D003659 ORTHO05D004298 2.4e-07 58.9 44 65.9
Cc04_g05030 Coffea canephora HOM05D003659 ORTHO05D004298 2.4e-07 58.9 44 63.6
PSO017G1057 Papaver somniferum HOM05D003659 ORTHO05D004298 2.4e-07 58.9 44 63.6
PSO170G6877 Papaver somniferum HOM05D003659 ORTHO05D004298 2.4e-07 58.9 44 63.6
Nitab4.5_0001454g0190 Nicotiana tabacum HOM05D003659 ORTHO05D004298 3.1e-07 58.5 44 65.9
Gohir.A05G058400 Gossypium hirsutum HOM05D003659 ORTHO05D004298 4.1e-07 58.2 43 67.4
Gohir.D05G060500 Gossypium hirsutum HOM05D003659 ORTHO05D004298 4.1e-07 58.2 43 67.4
Gorai.009G061600 Gossypium raimondii HOM05D003659 ORTHO05D004298 4.1e-07 58.2 43 67.4
SalBow7G4756 Salvia bowleyana HOM05D003659 ORTHO05D004298 4.1e-07 58.2 44 63.6
TAR625G1087 Trochodendron aralioides HOM05D003659 ORTHO05D004298 4.1e-07 58.2 44 63.6
TAR625G1310 Trochodendron aralioides HOM05D003659 ORTHO05D004298 4.1e-07 58.2 44 63.6
Glyma.04G061900 Glycine max HOM05D003659 ORTHO05D004298 5.4e-07 57.8 43 67.4
PGR044G1948 Punica granatum HOM05D003659 ORTHO05D004298 5.4e-07 57.8 43 65.1
Sc12g0008380 Simmondsia chinensis HOM05D003659 ORTHO05D004298 5.4e-07 57.8 44 61.4
Thecc.09G017100 Theobroma cacao HOM05D003659 ORTHO05D004298 5.4e-07 57.8 43 65.1
HPP92_004679 Vanilla planifolia HOM05D003659 ORTHO05D004298 5.4e-07 57.8 44 63.6
Atru.chr7.2534 Acer truncatum HOM05D003659 ORTHO05D004298 7.0e-07 57.4 43 67.4
arahy.Tifrunner.gnm1.ann1.48QDBJ Arachis hypogaea HOM05D003659 ORTHO05D004298 7.0e-07 57.4 43 65.1
arahy.Tifrunner.gnm1.ann1.85LDPV Arachis hypogaea HOM05D003659 ORTHO05D004298 7.0e-07 57.4 43 65.1
CSS0004565 Camellia sinensis var. sinensis HOM05D003659 ORTHO05D004298 7.0e-07 57.4 43 65.1
CSS0014874 Camellia sinensis var. sinensis HOM05D003659 ORTHO05D004298 7.0e-07 57.4 43 65.1
Duzib150G0849 Durio zibethinus HOM05D003659 ORTHO05D004298 7.0e-07 57.4 43 65.1
Duzib168G1659 Durio zibethinus HOM05D003659 ORTHO05D004298 7.0e-07 57.4 43 65.1
Migut.I00701 Erythranthe guttata HOM05D003659 ORTHO05D004298 7.0e-07 57.4 44 61.4
Manes.03G010100 Manihot esculenta HOM05D003659 ORTHO05D004298 7.0e-07 57.4 43 67.4
Nn8g39829 Nelumbo nucifera HOM05D003659 ORTHO05D004298 7.0e-07 57.4 43 65.1
Oeu027829.1 Olea europaea HOM05D003659 ORTHO05D004298 7.0e-07 57.4 44 61.4
Oeu060128.1 Olea europaea HOM05D003659 ORTHO05D004298 7.0e-07 57.4 44 61.4
THA.LOC104803632 Tarenaya hassleriana HOM05D003659 ORTHO05D004298 7.0e-07 57.4 43 67.4
Cfa013072 Carpinus fangiana HOM05D003659 ORTHO05D004298 9.2e-07 57.0 43 65.1
ClCG05G016430 Citrullus lanatus HOM05D003659 ORTHO05D004298 9.2e-07 57.0 43 65.1
MELO3C016972.2 Cucumis melo HOM05D003659 ORTHO05D004298 9.2e-07 57.0 43 65.1
Dinv21405 Davidia involucrata HOM05D003659 ORTHO05D004298 9.2e-07 57.0 44 63.6
Lsat_1_v5_gn_1_32141 Lactuca sativa HOM05D003659 ORTHO05D004298 9.2e-07 57.0 44 63.6
Oeu004335.5 Olea europaea HOM05D003659 ORTHO05D004298 9.2e-07 57.0 44 61.4
Glyma.06G062900 Glycine max HOM05D003659 ORTHO05D004298 1.2e-06 56.6 43 65.1
Gohir.A07G031500 Gossypium hirsutum HOM05D003659 ORTHO05D004298 1.2e-06 56.6 43 62.8
Gohir.D07G035300 Gossypium hirsutum HOM05D003659 ORTHO05D004298 1.2e-06 56.6 43 62.8
Gorai.001G037100 Gossypium raimondii HOM05D003659 ORTHO05D004298 1.2e-06 56.6 43 62.8
Lj1g0004529 Lotus japonicus HOM05D003659 ORTHO05D004298 1.2e-06 56.6 43 65.1
Lalb_Chr23g0268261 Lupinus albus HOM05D003659 ORTHO05D004298 1.2e-06 56.6 43 62.8
QL02p019557 Quercus lobata HOM05D003659 ORTHO05D004298 1.2e-06 56.6 43 65.1
Sed0005308 Sechium edule HOM05D003659 ORTHO05D004298 1.2e-06 56.6 43 62.8
GSVIVG01034217001 Vitis vinifera HOM05D003659 ORTHO05D004298 1.2e-06 56.6 44 61.4
CiPaw.08G006800 Carya illinoinensis HOM05D003659 ORTHO05D004298 1.6e-06 56.2 43 65.1
Eucgr.C02663 Eucalyptus grandis HOM05D003659 ORTHO05D004298 1.6e-06 56.2 43 65.1
Lj5A80T55 Lonicera japonica HOM05D003659 ORTHO05D004298 1.6e-06 56.2 44 63.6
SHI18485 Sapria himalayana HOM05D003659 ORTHO05D004298 1.6e-06 56.2 43 60.5
Actinidia18243 Actinidia chinensis HOM05D003659 ORTHO05D004298 2.0e-06 55.8 44 63.6
Actinidia25461 Actinidia chinensis HOM05D003659 ORTHO05D004298 2.0e-06 55.8 44 63.6
BcaB06g28036 Brassica carinata HOM05D003659 ORTHO05D004298 2.0e-06 55.8 56 55.4
BcaC07g40890 Brassica carinata HOM05D003659 ORTHO05D004298 2.0e-06 55.8 56 55.4
A09p55870 Brassica napus HOM05D003659 ORTHO05D004298 2.0e-06 55.8 56 55.4
C08p38860 Brassica napus HOM05D003659 ORTHO05D004298 2.0e-06 55.8 56 55.4
BolC8t51458H Brassica oleracea HOM05D003659 ORTHO05D004298 2.0e-06 55.8 56 55.4
BraA09t40990Z Brassica rapa HOM05D003659 ORTHO05D004298 2.0e-06 55.8 56 55.4
CARHR116580 Cardamine hirsuta HOM05D003659 ORTHO05D004298 2.0e-06 55.8 56 55.4
Thhalv10000317m.g Eutrema salsugineum HOM05D003659 ORTHO05D004298 2.0e-06 55.8 56 55.4
TWI32G0040 Tripterygium wilfordii HOM05D003659 ORTHO05D004298 2.0e-06 55.8 43 62.8
Ciclev10009450m.g Citrus clementina HOM05D003659 ORTHO05D004298 2.7e-06 55.5 43 65.1
COL.COLO4_03628 Corchorus olitorius HOM05D003659 ORTHO05D004298 2.7e-06 55.5 43 62.8
Phvul.009G088100 Phaseolus vulgaris HOM05D003659 ORTHO05D004298 2.7e-06 55.5 43 62.8
TPR.G40670 Trifolium pratense HOM05D003659 ORTHO05D004298 2.7e-06 55.5 43 65.1
TWI34G1103 Tripterygium wilfordii HOM05D003659 ORTHO05D004298 2.7e-06 55.5 43 62.8
BcaC02g08370 Brassica carinata HOM05D003659 ORTHO05D004298 3.5e-06 55.1 56 55.4
A04p19520 Brassica napus HOM05D003659 ORTHO05D004298 3.5e-06 55.1 56 55.4
C04p55110 Brassica napus HOM05D003659 ORTHO05D004298 3.5e-06 55.1 56 55.4
BolC4t27050H Brassica oleracea HOM05D003659 ORTHO05D004298 3.5e-06 55.1 56 55.4
BraA04t17546Z Brassica rapa HOM05D003659 ORTHO05D004298 3.5e-06 55.1 56 55.4
Carub.0004s0471 Capsella rubella HOM05D003659 ORTHO05D004298 3.5e-06 55.1 56 55.4
ECA247G2368 Erigeron canadensis HOM05D003659 ORTHO05D004298 3.5e-06 55.1 44 61.4
Migut.D01114 Erythranthe guttata HOM05D003659 ORTHO05D004298 3.5e-06 55.1 44 59.1
Lalb_Chr08g0244391 Lupinus albus HOM05D003659 ORTHO05D004298 3.5e-06 55.1 43 60.5
MD08G1057800 Malus domestica HOM05D003659 ORTHO05D004298 3.5e-06 55.1 43 60.5
GSVIVG01035892001 Vitis vinifera HOM05D003659 ORTHO05D004298 3.5e-06 55.1 43 60.5
AL4G16270 Arabidopsis lyrata HOM05D003659 ORTHO05D004298 4.5e-06 54.7 43 62.8
AT2G25110 Arabidopsis thaliana HOM05D003659 ORTHO05D004298 4.5e-06 54.7 43 62.8
CsaV3_4G036690 Cucumis sativus L. HOM05D003659 ORTHO05D004298 4.5e-06 54.7 43 62.8
DCAR_025575 Daucus carota HOM05D003659 ORTHO05D004298 5.9e-06 54.3 56 55.4
HanXRQChr08g0235851 Helianthus annuus HOM05D003659 ORTHO05D004298 5.9e-06 54.3 44 61.4
RcHm_v2.0_Chr6g0299581 Rosa chinensis HOM05D003659 ORTHO05D004298 5.9e-06 54.3 43 60.5
Sed0006058 Sechium edule HOM05D003659 ORTHO05D004298 5.9e-06 54.3 43 60.5
vmacro16858 Vaccinium macrocarpon HOM05D003659 ORTHO05D004298 5.9e-06 54.3 44 61.4
HanXRQChr04g0098481 Helianthus annuus HOM05D003659 ORTHO05D004298 7.8e-06 53.9 44 61.4
Medtr3g106130 Medicago truncatula HOM05D003659 ORTHO05D004298 7.8e-06 53.9 43 62.8
Psat5g032160 Pisum sativum HOM05D003659 ORTHO05D004298 7.8e-06 53.9 43 60.5
Potri.018G020700 Populus trichocarpa HOM05D003659 ORTHO05D004298 7.8e-06 53.9 43 62.8
Hund06525 Selenicereus undatus HOM05D003659 ORTHO05D004298 7.8e-06 53.9 44 59.1


User provided reference genes

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