Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G149.9 Capsicum annuum HOM05D007312 ORTHO05D009209 3.0e-75 285.0 140 100.0
Sopen02g017880 Solanum pennellii HOM05D007312 ORTHO05D009209 6.0e-47 191.0 96 94.8
PGSC0003DMG400010438 Solanum tuberosum HOM05D007312 ORTHO05D009209 6.0e-47 191.0 96 94.8
Nitab4.5_0001288g0230 Nicotiana tabacum HOM05D007312 ORTHO05D009209 2.3e-46 189.1 96 94.8
Nitab4.5_0007745g0050 Nicotiana tabacum HOM05D007312 ORTHO05D009209 8.6e-46 187.2 96 92.7
Solyc02g068710.3 Solanum lycopersicum HOM05D007312 ORTHO05D009209 8.6e-46 187.2 96 93.8
Peaxi162Scf00149g00224 Petunia axillaris HOM05D007312 ORTHO05D009209 6.2e-44 181.0 96 88.5
Cc09_g06000 Coffea canephora HOM05D007312 ORTHO05D009209 6.9e-43 177.6 96 88.5
RhsimUnG0109200 Rhododendron simsii HOM05D007312 ORTHO05D009209 2.0e-42 176.0 98 83.7
Migut.M01988 Erythranthe guttata HOM05D007312 ORTHO05D009209 5.8e-42 174.5 97 86.6
vmacro03527 Vaccinium macrocarpon HOM05D007312 ORTHO05D009209 5.8e-42 174.5 95 85.3
Sabra12G0094300 Salix brachista HOM05D007312 ORTHO05D009209 1.3e-41 173.3 99 84.8
Hma1.2p1_1005F.1_g246920 Hydrangea macrophylla HOM05D007312 ORTHO05D009209 1.7e-41 172.9 98 83.7
Potri.012G124500 Populus trichocarpa HOM05D007312 ORTHO05D009209 1.7e-41 172.9 99 84.8
MSTRG.7597 Avicennia marina HOM05D007312 ORTHO05D009209 2.2e-41 172.6 96 86.5
Rhsim13G0146500 Rhododendron simsii HOM05D007312 ORTHO05D009209 2.2e-41 172.6 92 87.0
Actinidia22408 Actinidia chinensis HOM05D007312 ORTHO05D009209 3.8e-41 171.8 96 83.3
Ah.01g020500 Amaranthus hybridus HOM05D007312 ORTHO05D009209 3.8e-41 171.8 100 85.0
Hund14701 Selenicereus undatus HOM05D007312 ORTHO05D009209 3.8e-41 171.8 95 87.4
AUR62010557 Chenopodium quinoa HOM05D007312 ORTHO05D009209 8.4e-41 170.6 96 84.4
GSVIVG01012104001 Vitis vinifera HOM05D007312 ORTHO05D009209 8.4e-41 170.6 89 91.0
TAR624G0630 Trochodendron aralioides HOM05D007312 ORTHO05D009209 1.1e-40 170.2 96 83.3
Manes.16G055800 Manihot esculenta HOM05D007312 ORTHO05D009209 1.4e-40 169.9 100 83.0
Duzib052G0161 Durio zibethinus HOM05D007312 ORTHO05D009209 1.9e-40 169.5 97 83.5
TWI63G0684 Tripterygium wilfordii HOM05D007312 ORTHO05D009209 1.9e-40 169.5 102 82.4
EL10Ac5g12681 Beta vulgaris HOM05D007312 ORTHO05D009209 2.4e-40 169.1 96 84.4
Ciclev10017175m.g Citrus clementina HOM05D007312 ORTHO05D009209 2.4e-40 169.1 98 83.7
Gohir.A12G046700 Gossypium hirsutum HOM05D007312 ORTHO05D009209 2.4e-40 169.1 97 84.5
BolC8t48163H Brassica oleracea HOM05D007312 ORTHO05D009209 7.1e-40 167.5 102 78.4
Lj2A350T56 Lonicera japonica HOM05D007312 ORTHO05D009209 7.1e-40 167.5 98 84.7
PGR042G3076 Punica granatum HOM05D007312 ORTHO05D009209 9.3e-40 167.2 100 83.0
Atru.chr10.560 Acer truncatum HOM05D007312 ORTHO05D009209 1.2e-39 166.8 99 81.8
CANSAT35G0781 Cannabis sativa HOM05D007312 ORTHO05D009209 1.2e-39 166.8 103 80.6
CiPaw.09G076400 Carya illinoinensis HOM05D007312 ORTHO05D009209 1.2e-39 166.8 97 83.5
BcaC07g37774 Brassica carinata HOM05D007312 ORTHO05D009209 1.6e-39 166.4 98 80.6
Thhalv10009117m.g Eutrema salsugineum HOM05D007312 ORTHO05D009209 1.6e-39 166.4 98 80.6
QL11p016282 Quercus lobata HOM05D007312 ORTHO05D009209 1.6e-39 166.4 97 85.6
Glyma.20G019100 Glycine max HOM05D007312 ORTHO05D009209 2.7e-39 165.6 84 94.0
Lj4g0021225 Lotus japonicus HOM05D007312 ORTHO05D009209 2.7e-39 165.6 84 92.9
MBI18_g11473_MAGBIO Magnolia biondii HOM05D007312 ORTHO05D009209 2.7e-39 165.6 89 85.4
Sp1g26990 Schrenkiella parvula HOM05D007312 ORTHO05D009209 2.7e-39 165.6 98 79.6
AL1G49340 Arabidopsis lyrata HOM05D007312 ORTHO05D009209 3.5e-39 165.2 99 79.8
AT1G31170 Arabidopsis thaliana HOM05D007312 ORTHO05D009209 3.5e-39 165.2 98 79.6
BcaB04g18176 Brassica carinata HOM05D007312 ORTHO05D009209 3.5e-39 165.2 98 79.6
AUR62017332 Chenopodium quinoa HOM05D007312 ORTHO05D009209 3.5e-39 165.2 112 74.1
MD05G1250400 Malus domestica HOM05D007312 ORTHO05D009209 3.5e-39 165.2 95 85.3
Medtr4g084180 Medicago truncatula HOM05D007312 ORTHO05D009209 3.5e-39 165.2 95 85.3
ClCG01G009570 Citrullus lanatus HOM05D007312 ORTHO05D009209 4.6e-39 164.9 91 85.7
MELO3C021735.2 Cucumis melo HOM05D007312 ORTHO05D009209 4.6e-39 164.9 91 85.7
THA.LOC104798553 Tarenaya hassleriana HOM05D007312 ORTHO05D009209 4.6e-39 164.9 86 90.7
Aa31LG2G15110 Aethionema arabicum HOM05D007312 ORTHO05D009209 6.0e-39 164.5 99 79.8
Carub.0001s2957 Capsella rubella HOM05D007312 ORTHO05D009209 6.0e-39 164.5 98 79.6
CsaV3_1G046220 Cucumis sativus L. HOM05D007312 ORTHO05D009209 6.0e-39 164.5 91 85.7
VMungo0251G1106 Vigna mungo HOM05D007312 ORTHO05D009209 6.0e-39 164.5 84 91.7
CARHR030640 Cardamine hirsuta HOM05D007312 ORTHO05D009209 7.8e-39 164.1 98 78.6
SalBow8G4543 Salvia bowleyana HOM05D007312 ORTHO05D009209 7.8e-39 164.1 89 88.8
Ca_18754_v3 Cicer arietinum L. HOM05D007312 ORTHO05D009209 1.0e-38 163.7 97 82.5
TPR.G38271 Trifolium pratense HOM05D007312 ORTHO05D009209 1.0e-38 163.7 97 84.5
Phvul.002G097300 Phaseolus vulgaris HOM05D007312 ORTHO05D009209 1.7e-38 162.9 84 90.5
SGA_v2.0_scaffold298G47689 Striga asiatica HOM05D007312 ORTHO05D009209 1.7e-38 162.9 96 81.2
A08p10710 Brassica napus HOM05D007312 ORTHO05D009209 3.0e-38 162.2 98 78.6
BraA08t33069Z Brassica rapa HOM05D007312 ORTHO05D009209 3.0e-38 162.2 98 78.6
CDE02G1125 Ceratophyllum demersum HOM05D007312 ORTHO05D009209 3.0e-38 162.2 96 79.2
arahy.Tifrunner.gnm1.ann1.XDA00H Arachis hypogaea HOM05D007312 ORTHO05D009209 3.9e-38 161.8 84 91.7
CSS0025621 Camellia sinensis var. sinensis HOM05D007312 ORTHO05D009209 3.9e-38 161.8 107 73.8
Os06g0174300 Oryza sativa ssp. japonica HOM05D007312 ORTHO05D009209 3.9e-38 161.8 88 85.2
PSO541G3426 Papaver somniferum HOM05D007312 ORTHO05D009209 6.6e-38 161.0 85 88.2
Eucgr.E04250 Eucalyptus grandis HOM05D007312 ORTHO05D009209 8.7e-38 160.6 101 77.2
FvH4_3g12430 Fragaria vesca HOM05D007312 ORTHO05D009209 8.7e-38 160.6 84 90.5
RcHm_v2.0_Chr5g0020311 Rosa chinensis HOM05D007312 ORTHO05D009209 8.7e-38 160.6 84 90.5
Zm00001eb375250 Zea mays HOM05D007312 ORTHO05D009209 1.1e-37 160.2 88 85.2
ECA234G3951 Erigeron canadensis HOM05D007312 ORTHO05D009209 1.9e-37 159.5 102 76.5
unitig_32.g10991 Utricularia gibba HOM05D000532 ORTHO05D009209 1.9e-37 159.5 87 83.9
Lsat_1_v5_gn_3_106761 Lactuca sativa HOM05D007312 ORTHO05D009209 4.3e-37 158.3 85 85.9
HanXRQChr12g0381571 Helianthus annuus HOM05D007312 ORTHO05D009209 5.6e-37 157.9 102 74.5
Aqoxy1G01718 Aquilegia oxysepala HOM05D007312 ORTHO05D009209 7.3e-37 157.5 84 89.3
Lalb_Chr16g0385171 Lupinus albus HOM05D007312 ORTHO05D009209 7.3e-37 157.5 84 85.7
HPP92_010212 Vanilla planifolia HOM05D007312 ORTHO05D009209 3.6e-36 155.2 89 79.8
Psat7g129800 Pisum sativum HOM05D007312 ORTHO05D009209 1.1e-35 153.7 91 82.4
arahy.Tifrunner.gnm1.ann1.FJ5394 Arachis hypogaea HOM05D007312 ORTHO05D009209 2.4e-35 152.5 84 89.3
SMO145G0246 Selaginella moellendorffii HOM05D007312 ORTHO05D009209 5.8e-34 147.9 85 78.8
Pp3c7_15740 Physcomitrium patens HOM05D007312 ORTHO05D009209 8.4e-33 144.1 85 76.5
Haze_06075 Corylus avellana HOM05D007312 ORTHO05D009209 2.4e-32 142.5 103 68.0
Nn7g38246 Nelumbo nucifera HOM05D007312 ORTHO05D009209 1.1e-29 133.7 101 70.3
Cre17.g729950 Chlamydomonas reinhardtii HOM05D007312 ORTHO05D009209 1.3e-28 130.2 87 73.6
RcHm_v2.0_Chr2g0126261 Rosa chinensis HOM05D007312 ORTHO05D009209 1.3e-28 130.2 84 76.2
Mapoly0066s0018 Marchantia polymorpha HOM05D007312 ORTHO05D009209 6.2e-28 127.9 143 49.7
CBR_g4 Chara braunii HOM05D007312 ORTHO05D009209 1.2e-26 123.6 86 68.6
Dinv25919 Davidia involucrata HOM05D007312 ORTHO05D009209 7.9e-23 110.9 65 83.1
Oeu056034.1 Olea europaea HOM05D007312 ORTHO05D009209 5.6e-21 104.8 63 82.5
HPP92_010191 Vanilla planifolia HOM05D007312 ORTHO05D009209 3.7e-20 102.1 89 60.7
Prupe.4G113200 Prunus persica HOM05D007312 ORTHO05D009209 5.3e-19 98.2 67 76.1
ATR0752G167 Amborella trichopoda HOM05D007312 ORTHO05D009209 1.1e-16 90.5 56 76.8
FAN25G0614 Fragaria x ananassa HOM05D007312 ORTHO05D009209 5.5e-16 88.2 50 88.0
Lalb_Chr09g0328681 Lupinus albus HOM05D007312 ORTHO05D009209 2.7e-15 85.9 41 87.8
Sabra12G0063500 Salix brachista HOM05D007312 ORTHO05D009209 7.9e-15 84.3 45 91.1
Sc01g0008940 Simmondsia chinensis HOM05D007312 ORTHO05D009209 1.0e-14 84.0 56 71.4
Thecc.02G008700 Theobroma cacao HOM05D007312 ORTHO05D009209 2.3e-14 82.8 65 66.2
Cpa.g.sc5085.1 Carica papaya HOM05D007312 ORTHO05D009209 1.1e-13 80.5 60 70.0
Gohir.D12G045700 Gossypium hirsutum HOM05D007312 ORTHO05D009209 1.1e-13 80.5 55 72.7
Gorai.008G048300 Gossypium raimondii HOM05D007312 ORTHO05D009209 1.1e-13 80.5 55 72.7
COL.COLO4_17652 Corchorus olitorius HOM05D007312 ORTHO05D009209 1.5e-13 80.1 51 70.6
Sed0015339 Sechium edule HOM05D007312 ORTHO05D009209 9.6e-13 77.4 43 86.0
FAN21G0246 Fragaria x ananassa HOM05D007312 ORTHO05D009209 1.1e-11 73.9 44 79.5
FAN16G3369 Fragaria x ananassa HOM05D007312 ORTHO05D009209 5.3e-11 71.6 41 85.4
Potri.015G124601 Populus trichocarpa HOM05D007312 ORTHO05D009209 7.9e-07 57.8 31 74.2


User provided reference genes

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