Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G149.50 Capsicum annuum HOM05D007439 ORTHO05D009294 2.8e-159 566.6 747 100.0
PGSC0003DMG400010332 Solanum tuberosum HOM05D007439 ORTHO05D009294 3.0e-105 387.1 715 91.7
Solyc02g068890.3 Solanum lycopersicum HOM05D007439 ORTHO05D009294 3.7e-103 380.2 715 91.3
Sopen02g017990 Solanum pennellii HOM05D007439 ORTHO05D009294 1.6e-101 374.8 715 91.0
Nitab4.5_0001288g0070 Nicotiana tabacum HOM05D002343 ORTHO05D004258 1.3e-87 328.6 711 88.7
Peaxi162Scf00149g00061 Petunia axillaris HOM05D007439 ORTHO05D009294 1.6e-50 205.3 630 72.2
Manes.15G044700 Manihot esculenta HOM05D007439 ORTHO05D009294 1.2e-45 189.1 689 80.7
Actinidia22395 Actinidia chinensis HOM05D007439 ORTHO05D009294 7.9e-45 186.4 668 83.4
MD05G1251800 Malus domestica HOM05D007439 ORTHO05D009294 7.9e-45 186.4 653 83.6
Nitab4.5_0000029g0150 Nicotiana tabacum HOM05D007439 ORTHO05D009294 1.3e-44 185.7 172 64.5
Cc09_g06120 Coffea canephora HOM05D007439 ORTHO05D009294 3.9e-44 184.1 656 78.2
SGA_v2.0_scaffold298G47685 Striga asiatica HOM05D007439 ORTHO05D009294 3.3e-43 181.0 658 66.9
CANSAT80G1475 Cannabis sativa HOM05D007439 ORTHO05D009294 7.4e-43 179.9 660 79.7
Prupe.4G111800 Prunus persica HOM05D007439 ORTHO05D009294 3.7e-42 177.6 651 77.6
CSS0002129 Camellia sinensis var. sinensis HOM05D007439 ORTHO05D009294 4.8e-42 177.2 148 66.9
QL11p016354 Quercus lobata HOM05D002343 ORTHO05D004258 2.4e-41 174.9 672 82.3
Oeu060350.1 Olea europaea HOM05D007439 ORTHO05D009294 2.0e-40 171.8 193 56.5
Cfa000712 Carpinus fangiana HOM05D007439 ORTHO05D009294 5.8e-40 170.2 676 81.5
Dinv02254 Davidia involucrata HOM05D007439 ORTHO05D009294 1.0e-39 169.5 675 82.2
Rhsim08G0175300 Rhododendron simsii HOM05D007439 ORTHO05D009294 1.3e-39 169.1 664 82.8
CANSAT80G1820 Cannabis sativa HOM05D007439 ORTHO05D009294 2.9e-39 167.9 702 76.8
CiPaw.09G077400 Carya illinoinensis HOM05D007439 ORTHO05D009294 4.9e-39 167.2 712 78.5
Migut.F01393 Erythranthe guttata HOM05D007439 ORTHO05D009294 4.9e-39 167.2 144 62.5
Gohir.D05G147800 Gossypium hirsutum HOM05D007439 ORTHO05D009294 1.6e-37 162.2 698 74.5
FvH4_3g12270 Fragaria vesca HOM05D007439 ORTHO05D009294 4.6e-37 160.6 711 77.8
Gorai.009G151900 Gossypium raimondii HOM05D007439 ORTHO05D009294 4.6e-37 160.6 698 74.5
Haze_06039 Corylus avellana HOM05D007439 ORTHO05D009294 6.0e-37 160.2 148 60.8
HanXRQChr14g0447351 Helianthus annuus HOM05D007439 ORTHO05D009294 6.0e-37 160.2 686 79.3
Psat0s929g0160 Pisum sativum HOM05D007439 ORTHO05D009294 7.9e-37 159.8 658 81.3
FAN25G2844 Fragaria x ananassa HOM05D002343 ORTHO05D004258 1.3e-36 159.1 217 46.1
Duzib235G1301 Durio zibethinus HOM05D007439 ORTHO05D009294 1.8e-36 158.7 698 73.4
FAN16G2455 Fragaria x ananassa HOM05D002343 ORTHO05D004258 2.3e-36 158.3 196 49.0
Thecc.06G142600 Theobroma cacao HOM05D007439 ORTHO05D009294 2.3e-36 158.3 693 78.1
Thecc.06G142800 Theobroma cacao HOM05D007439 ORTHO05D009294 2.3e-36 158.3 693 78.1
RcHm_v2.0_Chr5g0020081 Rosa chinensis HOM05D007439 ORTHO05D009294 3.0e-36 157.9 712 77.5
TWI38G1636 Tripterygium wilfordii HOM05D007439 ORTHO05D009294 3.0e-36 157.9 169 53.8
MSTRG.16346 Avicennia marina HOM05D007439 ORTHO05D009294 3.9e-36 157.5 704 78.1
Lalb_Chr01g0021581 Lupinus albus HOM05D007439 ORTHO05D009294 3.9e-36 157.5 685 79.6
Ciclev10014445m.g Citrus clementina HOM05D007439 ORTHO05D009294 5.1e-36 157.1 188 52.1
DCAR_003780 Daucus carota HOM05D007439 ORTHO05D009294 5.1e-36 157.1 193 50.8
Ah.11g038960 Amaranthus hybridus HOM05D007439 ORTHO05D009294 1.5e-35 155.6 653 72.0
Glyma.09G242500 Glycine max HOM05D007439 ORTHO05D009294 1.9e-35 155.2 686 78.7
SalBow6G0510 Salvia bowleyana HOM05D007439 ORTHO05D009294 1.9e-35 155.2 172 53.5
Lj2C350T3 Lonicera japonica HOM05D007439 ORTHO05D009294 2.5e-35 154.8 190 52.1
Gohir.A05G145400 Gossypium hirsutum HOM05D007439 ORTHO05D009294 5.7e-35 153.7 701 66.8
Nitab4.5_0013428g0020 Nicotiana tabacum HOM05D007439 ORTHO05D009294 7.4e-35 153.3 84 91.7
Ca_04050_v3 Cicer arietinum L. HOM05D007439 ORTHO05D009294 9.6e-35 152.9 669 80.3
Medtr7g405940 Medicago truncatula HOM05D007439 ORTHO05D009294 9.6e-35 152.9 648 82.7
Cpa.g.sc135.9 Carica papaya HOM05D007439 ORTHO05D009294 1.3e-34 152.5 158 52.5
Lj3g0009249 Lotus japonicus HOM05D007439 ORTHO05D009294 2.8e-34 151.4 189 49.2
Sed0017437 Sechium edule HOM05D007439 ORTHO05D009294 2.8e-34 151.4 674 73.4
THA.LOC104811547 Tarenaya hassleriana HOM05D007439 ORTHO05D009294 4.8e-34 150.6 144 59.0
PGR042G2360 Punica granatum HOM05D007439 ORTHO05D009294 8.2e-34 149.8 672 69.8
Thecc.06G142300 Theobroma cacao HOM05D007439 ORTHO05D009294 8.2e-34 149.8 693 78.2
FAN21G0604 Fragaria x ananassa HOM05D002343 ORTHO05D004258 4.1e-33 147.5 123 60.2
Sabra15G0138100 Salix brachista HOM05D007439 ORTHO05D009294 1.2e-32 146.0 662 81.7
EL10Ac1g02315 Beta vulgaris HOM05D007439 ORTHO05D009294 2.6e-32 144.8 179 49.2
Lsat_1_v5_gn_2_63940 Lactuca sativa HOM05D007439 ORTHO05D009294 3.4e-32 144.4 111 66.7
AUR62035769 Chenopodium quinoa HOM05D007439 ORTHO05D009294 4.5e-32 144.1 156 52.6
Eucgr.E01800 Eucalyptus grandis HOM05D007439 ORTHO05D009294 4.5e-32 144.1 123 62.6
ClCG01G009470 Citrullus lanatus HOM05D007439 ORTHO05D009294 7.6e-32 143.3 168 50.0
Potri.015G121700 Populus trichocarpa HOM05D007439 ORTHO05D009294 7.6e-32 143.3 721 77.0
Sp7g18380 Schrenkiella parvula HOM05D004848 ORTHO05D006859 7.6e-32 143.3 139 56.1
AT4G19890 Arabidopsis thaliana HOM05D007439 ORTHO05D009294 1.3e-31 142.5 146 56.8
BcaNung01745 Brassica carinata HOM05D007439 ORTHO05D009294 1.3e-31 142.5 156 53.8
Atru.chr10.530 Acer truncatum HOM05D007439 ORTHO05D009294 1.7e-31 142.1 164 50.6
Eucgr.E01795 Eucalyptus grandis HOM05D007439 ORTHO05D009294 2.2e-31 141.7 123 61.8
A01p11750 Brassica napus HOM05D007439 ORTHO05D009294 2.9e-31 141.4 156 53.2
BraA01t01117Z Brassica rapa HOM05D007439 ORTHO05D009294 2.9e-31 141.4 156 53.2
BcaC09g51360 Brassica carinata HOM05D007439 ORTHO05D009294 5.0e-31 140.6 141 56.0
C01p13940 Brassica napus HOM05D007439 ORTHO05D009294 5.0e-31 140.6 141 56.0
BolC1t01361H Brassica oleracea HOM05D007439 ORTHO05D009294 5.0e-31 140.6 141 56.0
AL7G34150 Arabidopsis lyrata HOM05D004848 ORTHO05D009294 6.5e-31 140.2 147 57.1
CsaV3_1G046310 Cucumis sativus L. HOM05D007439 ORTHO05D009294 6.5e-31 140.2 674 73.0
Aa31LG6G2350 Aethionema arabicum HOM05D004848 ORTHO05D006859 8.4e-31 139.8 142 58.5
MELO3C021752.2 Cucumis melo HOM05D007439 ORTHO05D009294 8.4e-31 139.8 192 47.4
arahy.Tifrunner.gnm1.ann1.FQ7S35 Arachis hypogaea HOM05D002637 ORTHO05D008095 1.2e-29 136.0 662 80.2
Eucgr.E01833 Eucalyptus grandis HOM05D007439 ORTHO05D009294 2.1e-29 135.2 94 70.2
Phvul.008G046300 Phaseolus vulgaris HOM05D007439 ORTHO05D009294 2.1e-29 135.2 689 78.7
Medtr7g007400 Medicago truncatula HOM05D007439 ORTHO05D009294 2.7e-29 134.8 626 83.5
VMungo1383G3026 Vigna mungo HOM05D007439 ORTHO05D009294 1.0e-28 132.9 664 80.3
TAR633G0007 Trochodendron aralioides HOM05D007439 ORTHO05D009294 1.3e-28 132.5 151 53.0
Aqoxy7G03766 Aquilegia oxysepala HOM05D007439 ORTHO05D009294 1.8e-28 132.1 699 65.5
Carub.0007s2132 Capsella rubella HOM05D007439 ORTHO05D009294 8.7e-28 129.8 127 56.7
ECA238G3489 Erigeron canadensis HOM05D000031 ORTHO05D000030 1.5e-27 129.0 107 65.4
Thhalv10027430m.g Eutrema salsugineum HOM05D007439 ORTHO05D009294 2.5e-27 128.3 637 82.1
SHI24856 Sapria himalayana HOM05D007439 ORTHO05D009294 7.4e-27 126.7 151 48.3
AUR62034958 Chenopodium quinoa HOM05D007439 ORTHO05D009294 9.7e-27 126.3 116 56.0
Haze_06038 Corylus avellana HOM05D007439 ORTHO05D009294 4.1e-25 120.9 94 69.1
QL11p017775 Quercus lobata HOM05D000038 ORTHO05D000143 6.9e-25 120.2 96 61.5
CARHR226670 Cardamine hirsuta HOM05D007439 ORTHO05D009294 2.0e-24 118.6 178 44.4
COL.COLO4_30991 Corchorus olitorius HOM05D007439 ORTHO05D009294 4.5e-24 117.5 84 66.7
PSO210G3018 Papaver somniferum HOM05D007439 ORTHO05D009294 5.9e-24 117.1 97 56.7
Sc02g0008330 Simmondsia chinensis HOM05D007439 ORTHO05D009294 1.0e-23 116.3 196 42.9
ATR0049G016 Amborella trichopoda HOM05D007439 ORTHO05D009294 2.9e-23 114.8 131 44.3
PSO210G5823 Papaver somniferum HOM05D007439 ORTHO05D009294 4.2e-22 110.9 701 59.8
RcHm_v2.0_Chr7g0211421 Rosa chinensis HOM05D007439 ORTHO05D009294 4.6e-21 107.5 99 54.5
Eucgr.E01847 Eucalyptus grandis HOM05D007439 ORTHO05D009294 8.8e-20 103.2 84 64.3
MBI03_g16306_MAGBIO Magnolia biondii HOM05D007439 ORTHO05D009294 2.0e-19 102.1 161 41.6
HPP92_005808 Vanilla planifolia HOM05D007439 ORTHO05D009294 2.5e-19 101.7 166 42.8
HPP92_005782 Vanilla planifolia HOM05D007439 ORTHO05D009294 3.3e-19 101.3 166 43.4
MD10G1232900 Malus domestica HOM05D007439 ORTHO05D009294 7.4e-19 100.1 72 66.7
BcaB06g28505 Brassica carinata HOM05D007439 ORTHO05D009294 1.7e-18 99.0 94 58.5
BolC4t27551H Brassica oleracea HOM05D007439 ORTHO05D009294 1.7e-18 99.0 94 58.5
CDE06G0761 Ceratophyllum demersum HOM05D000063 ORTHO05D002147 1.1e-17 96.3 184 38.6
Os11g0607100 Oryza sativa ssp. japonica HOM05D007439 ORTHO05D009294 2.0e-16 92.0 102 40.2
Eucgr.E01870 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.3e-15 89.4 84 56.0
C04p60520 Brassica napus HOM05D007439 ORTHO05D009294 5.5e-14 84.0 94 53.2
Eucgr.E01791 Eucalyptus grandis HOM05D007439 ORTHO05D009294 6.1e-13 80.5 57 68.4
Eucgr.E01806 Eucalyptus grandis HOM05D007439 ORTHO05D009294 1.8e-12 79.0 50 78.0
Haze_06045 Corylus avellana HOM05D001622 ORTHO05D009294 9.7e-11 73.2 65 58.5
SEGI_11644 Sequoiadendron giganteum HOM05D007439 ORTHO05D009294 2.2e-10 72.0 149 32.2
SEGI_34940 Sequoiadendron giganteum HOM05D007439 ORTHO05D009294 2.2e-10 72.0 149 32.2
Zm00001eb167160 Zea mays HOM05D007439 ORTHO05D009294 3.2e-06 58.2 103 35.9


User provided reference genes

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