Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G149.44 Capsicum annuum HOM05D000475 ORTHO05D011666 7.8e-61 236.9 115 100.0
CAN.G1057.19 Capsicum annuum HOM05D000222 ORTHO05D004416 5.6e-35 151.0 74 91.9
CAN.G1328.7 Capsicum annuum HOM05D003810 ORTHO05D004416 3.2e-30 135.2 74 86.5
CAN.G289.45 Capsicum annuum HOM05D002177 ORTHO05D004416 5.5e-30 134.4 74 85.1
CAN.G629.5 Capsicum annuum HOM05D000475 ORTHO05D000343 1.9e-27 125.9 75 82.7
CAN.G6.22 Capsicum annuum HOM05D000475 ORTHO05D011666 1.1e-25 120.2 74 78.4
Nitab4.5_0000047g0200 Nicotiana tabacum HOM05D000475 ORTHO05D000343 4.5e-24 114.8 103 58.3
Peaxi162Scf00009g01231 Petunia axillaris HOM05D000475 ORTHO05D000343 1.0e-20 103.6 74 70.3
Migut.L02045 Erythranthe guttata HOM05D000475 ORTHO05D000343 5.1e-20 101.3 75 62.7
Medtr7g070320 Medicago truncatula HOM05D000475 ORTHO05D000343 3.3e-19 98.6 75 61.3
RcHm_v2.0_Chr3g0461581 Rosa chinensis HOM05D000475 ORTHO05D000343 4.3e-19 98.2 85 55.3
QL05p049129 Quercus lobata HOM05D000475 ORTHO05D000343 2.2e-18 95.9 75 61.3
CAN.G257.37 Capsicum annuum HOM05D000475 ORTHO05D011666 1.4e-17 93.2 49 81.6
Aqoxy3G02479 Aquilegia oxysepala HOM05D000475 ORTHO05D000343 2.6e-16 89.0 73 57.5
Solyc10g076330.3 Solanum lycopersicum HOM05D000475 ORTHO05D000343 7.7e-16 87.4 72 56.9
Sp6g40920 Schrenkiella parvula HOM05D000475 ORTHO05D000343 1.0e-15 87.0 75 57.3
arahy.Tifrunner.gnm1.ann1.VSZX8Y Arachis hypogaea HOM05D000475 ORTHO05D000343 1.3e-15 86.7 74 56.8
CAN.G1225.6 Capsicum annuum HOM05D000475 ORTHO05D000343 8.5e-15 84.0 71 57.7
DCAR_018667 Daucus carota HOM05D000475 ORTHO05D000343 8.5e-15 84.0 77 54.5
Sopen10g027970 Solanum pennellii HOM05D000475 ORTHO05D000343 8.5e-15 84.0 70 57.1
A10p33760 Brassica napus HOM05D000475 ORTHO05D000343 1.9e-14 82.8 75 54.7
C09p74700 Brassica napus HOM05D000475 ORTHO05D000343 1.9e-14 82.8 75 54.7
BraA10t45406Z Brassica rapa HOM05D000475 ORTHO05D000343 1.9e-14 82.8 75 54.7
BcaNung03297 Brassica carinata HOM05D000475 ORTHO05D000343 2.5e-14 82.4 75 54.7
BolC9t60202H Brassica oleracea HOM05D000475 ORTHO05D000343 2.5e-14 82.4 75 54.7
Peaxi162Scf00284g00231 Petunia axillaris HOM05D000475 ORTHO05D000343 4.2e-14 81.6 99 44.4
TPR.G25494 Trifolium pratense HOM05D000475 ORTHO05D011666 4.2e-14 81.6 90 45.6
Thhalv10012920m.g Eutrema salsugineum HOM05D000475 ORTHO05D000343 7.2e-14 80.9 75 54.7
COL.COLO4_24866 Corchorus olitorius HOM05D000475 ORTHO05D000343 2.1e-13 79.3 75 48.0
Eucgr.G03101 Eucalyptus grandis HOM05D000475 ORTHO05D011666 2.7e-13 79.0 74 52.7
Os01g0165200 Oryza sativa ssp. japonica HOM05D000475 ORTHO05D000343 6.1e-13 77.8 74 52.7
Thecc.05G006500 Theobroma cacao HOM05D000475 ORTHO05D000343 6.1e-13 77.8 48 72.9
Lj1A962T107 Lonicera japonica HOM05D000475 ORTHO05D000343 1.8e-12 76.3 64 54.7
Phvul.010G010600 Phaseolus vulgaris HOM05D000475 ORTHO05D011666 1.8e-12 76.3 57 57.9
Ca_07698_v3 Cicer arietinum L. HOM05D000475 ORTHO05D000343 2.3e-12 75.9 55 61.8
TPR.G4429 Trifolium pratense HOM05D000475 ORTHO05D000343 3.0e-12 75.5 59 52.5
Lalb_Chr07g0191001 Lupinus albus HOM05D000475 ORTHO05D011666 6.7e-12 74.3 72 47.2
Lj2g0010150 Lotus japonicus HOM05D000475 ORTHO05D000343 1.1e-11 73.6 55 58.2
Nitab4.5_0001106g0120 Nicotiana tabacum HOM05D000475 ORTHO05D000343 1.1e-11 73.6 90 47.8
TPR.G35832 Trifolium pratense HOM05D000475 ORTHO05D000343 1.1e-11 73.6 57 52.6
CAN.G261.16 Capsicum annuum HOM05D000222 ORTHO05D000001 3.3e-11 72.0 40 90.0
CAN.G312.5 Capsicum annuum HOM05D003810 ORTHO05D000001 3.3e-11 72.0 40 92.5
BcaC06g31955 Brassica carinata HOM05D000389 ORTHO05D000287 7.4e-11 70.9 75 48.0
Psat3g124320 Pisum sativum HOM05D000475 ORTHO05D000343 1.3e-10 70.1 53 56.6
TWI38G2109 Tripterygium wilfordii HOM05D000475 ORTHO05D000343 1.3e-10 70.1 74 44.6
CAN.G790.44 Capsicum annuum HOM05D000872 ORTHO05D000777 1.7e-10 69.7 41 87.8
CAN.G1034.2 Capsicum annuum HOM05D000222 ORTHO05D011077 3.7e-10 68.6 40 87.5
MELO3C008322.2 Cucumis melo HOM05D000475 ORTHO05D000343 1.1e-09 67.0 47 63.8
PGSC0003DMG400011861 Solanum tuberosum HOM05D000475 ORTHO05D000343 1.1e-09 67.0 59 54.2
Rhsim03G0110100 Rhododendron simsii HOM05D000475 ORTHO05D011666 1.4e-09 66.6 50 58.0
Solyc06g050600.4 Solanum lycopersicum HOM05D000475 ORTHO05D011666 1.8e-09 66.2 46 63.0
Solyc10g076340.3 Solanum lycopersicum HOM05D000475 ORTHO05D000343 2.0e-08 62.8 58 50.0
AT5G01660 Arabidopsis thaliana HOM05D000475 ORTHO05D000343 2.6e-08 62.4 75 41.3
CAN.G548.8 Capsicum annuum HOM05D000222 ORTHO05D012343 2.6e-08 62.4 41 78.0
Haze_17294 Corylus avellana HOM05D000475 ORTHO05D000343 5.9e-08 61.2 74 40.5
Peaxi162Scf00264g00858 Petunia axillaris HOM05D000001 ORTHO05D000003 5.9e-08 61.2 50 56.0
CDE07G1739 Ceratophyllum demersum HOM05D000475 ORTHO05D000343 7.7e-08 60.8 47 57.4
HanXRQChr14g0458941 Helianthus annuus HOM05D000475 ORTHO05D000343 7.7e-08 60.8 66 51.5
AL6G10390 Arabidopsis lyrata HOM05D000475 ORTHO05D000343 1.7e-07 59.7 75 41.3
CAN.G8.3 Capsicum annuum HOM05D003365 ORTHO05D003899 2.2e-07 59.3 40 80.0
CARHR212020 Cardamine hirsuta HOM05D000475 ORTHO05D000343 1.9e-06 56.2 53 52.8
TPR.G21356 Trifolium pratense HOM05D000475 ORTHO05D011666 1.9e-06 56.2 94 37.2
arahy.Tifrunner.gnm1.ann1.PI8N4R Arachis hypogaea HOM05D000475 ORTHO05D000343 3.2e-06 55.5 54 48.1
ECA238G4627 Erigeron canadensis HOM05D000475 ORTHO05D000343 5.5e-06 54.7 69 42.0
Peaxi162Scf00264g00857 Petunia axillaris HOM05D000475 ORTHO05D014148 7.2e-06 54.3 69 44.9
unitig_62.g23470 Utricularia gibba HOM05D000475 ORTHO05D000343 7.2e-06 54.3 46 54.3


User provided reference genes

Program Settings