Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G1485.3 Capsicum annuum HOM05D000435 ORTHO05D013824 4.7e-49 197.6 103 100.0
CAN.G78.6 Capsicum annuum HOM05D000435 ORTHO05D013824 2.7e-44 181.8 103 91.3
CAN.G72.11 Capsicum annuum HOM05D000435 ORTHO05D013824 5.2e-40 167.5 103 85.4
CAN.G85.21 Capsicum annuum HOM05D000435 ORTHO05D016180 7.8e-28 127.1 71 90.1
Nitab4.5_0000085g0100 Nicotiana tabacum HOM05D000435 ORTHO05D013824 5.1e-27 124.4 71 85.9
CAN.G1109.6 Capsicum annuum HOM05D000435 ORTHO05D016180 1.5e-26 122.9 71 87.3
CAN.G1.3 Capsicum annuum HOM05D000435 ORTHO05D016180 7.3e-26 120.6 75 82.7
Nitab4.5_0008535g0030 Nicotiana tabacum HOM05D000435 ORTHO05D013824 1.6e-25 119.4 67 89.6
Nitab4.5_0001152g0690 Nicotiana tabacum HOM05D000435 ORTHO05D013824 3.6e-25 118.2 71 83.1
CAN.G623.32 Capsicum annuum HOM05D000435 ORTHO05D000430 1.4e-24 116.3 71 83.1
Peaxi162Scf00139g01031 Petunia axillaris HOM05D000435 ORTHO05D000430 1.8e-24 115.9 71 80.3
Solyc07g065770.3 Solanum lycopersicum HOM05D000435 ORTHO05D013824 1.5e-23 112.8 71 81.7
Nitab4.5_0005853g0060 Nicotiana tabacum HOM05D068302 ORTHO05D013824 3.8e-22 108.2 68 82.4
Nitab4.5_0000152g0410 Nicotiana tabacum HOM05D000435 ORTHO05D000430 1.9e-21 105.9 72 76.4
Sopen07g033980 Solanum pennellii HOM05D003572 ORTHO05D004118 1.9e-21 105.9 68 80.9
Nitab4.5_0000172g2200 Nicotiana tabacum HOM05D000435 ORTHO05D013824 3.2e-21 105.1 69 76.8
CAN.G131.13 Capsicum annuum HOM05D044362 ORTHO05D016180 5.4e-21 104.4 72 76.4
Nitab4.5_0010643g0020 Nicotiana tabacum HOM05D000435 ORTHO05D000430 5.4e-21 104.4 73 75.3
Dinv10357 Davidia involucrata HOM05D000435 ORTHO05D000430 7.8e-20 100.5 71 71.8
Prupe.6G027000 Prunus persica HOM05D000435 ORTHO05D000430 9.6e-18 93.6 71 66.2
Duzib170G0379 Durio zibethinus HOM05D000435 ORTHO05D000430 1.3e-17 93.2 71 67.6
QL08p003237 Quercus lobata HOM05D000435 ORTHO05D000430 1.6e-17 92.8 71 66.2
CSS0004404 Camellia sinensis var. sinensis HOM05D000435 ORTHO05D000430 2.1e-17 92.4 74 68.9
CSS0032781 Camellia sinensis var. sinensis HOM05D000435 ORTHO05D000430 2.1e-17 92.4 74 68.9
Nitab4.5_0001152g0130 Nicotiana tabacum HOM05D000435 ORTHO05D013824 8.1e-17 90.5 55 81.8
Thecc.07G008500 Theobroma cacao HOM05D000435 ORTHO05D000430 8.1e-17 90.5 81 61.7
Ca_06413_v3 Cicer arietinum L. HOM05D000435 ORTHO05D000430 1.1e-16 90.1 101 53.5
RcHm_v2.0_Chr5g0075901 Rosa chinensis HOM05D000435 ORTHO05D000430 1.1e-16 90.1 94 54.3
Psat0s4150g0240 Pisum sativum HOM05D000435 ORTHO05D000430 1.8e-16 89.4 72 65.3
Atru.chr2.3749 Acer truncatum HOM05D000435 ORTHO05D000430 2.4e-16 89.0 71 64.8
Atru.chr2.3763 Acer truncatum HOM05D000435 ORTHO05D000430 2.4e-16 89.0 71 64.8
Gohir.A08G025300 Gossypium hirsutum HOM05D000435 ORTHO05D000430 2.4e-16 89.0 73 65.8
Gohir.D08G035800 Gossypium hirsutum HOM05D000435 ORTHO05D000430 2.4e-16 89.0 73 65.8
Gorai.004G033800 Gossypium raimondii HOM05D000435 ORTHO05D000430 2.4e-16 89.0 73 65.8
Sabra16G0243600 Salix brachista HOM05D000435 ORTHO05D000430 2.4e-16 89.0 71 62.0
DCAR_017069 Daucus carota HOM05D000435 ORTHO05D000430 3.1e-16 88.6 72 68.1
Glyma.02G302200 Glycine max HOM05D000435 ORTHO05D000430 4.0e-16 88.2 71 63.4
Lalb_Chr10g0107501 Lupinus albus HOM05D000435 ORTHO05D000430 4.0e-16 88.2 71 66.2
Manes.03G143200 Manihot esculenta HOM05D000435 ORTHO05D000430 4.0e-16 88.2 81 60.5
Nitab4.5_0000172g0070 Nicotiana tabacum HOM05D000435 ORTHO05D016180 4.0e-16 88.2 103 50.5
CAN.G1.23 Capsicum annuum HOM05D000435 ORTHO05D016180 5.3e-16 87.8 60 71.7
Glyma.14G012000 Glycine max HOM05D000435 ORTHO05D000430 5.3e-16 87.8 71 63.4
LjContig00081g0009877 Lotus japonicus HOM05D000435 ORTHO05D000430 5.3e-16 87.8 71 63.4
Nitab4.5_0001152g0100 Nicotiana tabacum HOM05D000435 ORTHO05D016180 5.3e-16 87.8 52 82.7
MD11G1036200 Malus domestica HOM05D000435 ORTHO05D000430 6.9e-16 87.4 93 53.8
Cpa.g.sc12.135 Carica papaya HOM05D000435 ORTHO05D000430 1.5e-15 86.3 68 67.6
Cfa016927 Carpinus fangiana HOM05D000435 ORTHO05D000430 2.0e-15 85.9 71 66.2
Nitab4.5_0002312g0050 Nicotiana tabacum HOM05D000435 ORTHO05D013824 2.0e-15 85.9 50 80.0
GSVIVG01014733001 Vitis vinifera HOM05D000435 ORTHO05D000430 2.0e-15 85.9 71 59.2
Potri.001G370600 Populus trichocarpa HOM05D000435 ORTHO05D000430 2.6e-15 85.5 72 62.5
Potri.011G094650 Populus trichocarpa HOM05D000435 ORTHO05D000430 2.6e-15 85.5 98 50.0
TPR.G1291 Trifolium pratense HOM05D000435 ORTHO05D000430 5.8e-15 84.3 101 50.5
CiPaw.11G206300 Carya illinoinensis HOM05D000435 ORTHO05D000430 7.6e-15 84.0 71 64.8
Phvul.008G280800 Phaseolus vulgaris HOM05D000435 ORTHO05D000430 7.6e-15 84.0 71 59.2
TAR627G0575 Trochodendron aralioides HOM05D003572 ORTHO05D004118 7.6e-15 84.0 71 62.0
Lj1A893T55 Lonicera japonica HOM05D000435 ORTHO05D000430 1.3e-14 83.2 71 63.4
VMungo0647G0856 Vigna mungo HOM05D000435 ORTHO05D000430 1.7e-14 82.8 71 59.2
Haze_09858 Corylus avellana HOM05D000435 ORTHO05D000430 2.2e-14 82.4 71 63.4
TWI39G0143 Tripterygium wilfordii HOM05D000435 ORTHO05D000430 2.9e-14 82.0 71 63.4
DCAR_013252 Daucus carota HOM05D000435 ORTHO05D000430 8.4e-14 80.5 73 63.0
FvH4_3g42410 Fragaria vesca HOM05D000435 ORTHO05D000430 1.1e-13 80.1 94 50.0
FAN11G3608 Fragaria x ananassa HOM05D000435 ORTHO05D000430 1.1e-13 80.1 94 50.0
FAN28G0967 Fragaria x ananassa HOM05D000435 ORTHO05D000430 1.1e-13 80.1 94 50.0
Sc03g0011590 Simmondsia chinensis HOM05D000435 ORTHO05D000430 1.1e-13 80.1 71 63.4
PGSC0003DMG400022268 Solanum tuberosum HOM05D003572 ORTHO05D004118 1.4e-13 79.7 50 82.0
COL.COLO4_07733 Corchorus olitorius HOM05D003572 ORTHO05D004118 1.9e-13 79.3 70 65.7
arahy.Tifrunner.gnm1.ann1.64V7P3 Arachis hypogaea HOM05D000435 ORTHO05D000430 2.4e-13 79.0 74 62.2
Medtr5g096390 Medicago truncatula HOM05D000435 ORTHO05D000430 2.4e-13 79.0 101 51.5
FAN25G2805 Fragaria x ananassa HOM05D000435 ORTHO05D000430 3.2e-13 78.6 84 51.2
Ciclev10010223m.g Citrus clementina HOM05D000435 ORTHO05D000430 4.2e-13 78.2 73 61.6
Eucgr.F03676 Eucalyptus grandis HOM05D000435 ORTHO05D000430 1.2e-12 76.6 71 52.1
FAN16G3565 Fragaria x ananassa HOM05D000435 ORTHO05D000430 2.1e-12 75.9 94 47.9
arahy.Tifrunner.gnm1.ann1.D8MFXN Arachis hypogaea HOM05D000435 ORTHO05D000430 3.5e-12 75.1 73 60.3
Nitab4.5_0008300g0010 Nicotiana tabacum HOM05D000435 ORTHO05D013824 3.5e-12 75.1 45 82.2
Migut.M01629 Erythranthe guttata HOM05D000435 ORTHO05D000430 6.0e-12 74.3 71 59.2
SGA_v2.0_scaffold171G38846 Striga asiatica HOM05D000435 ORTHO05D000430 6.0e-12 74.3 66 59.1
TPR.G1281 Trifolium pratense HOM05D000435 ORTHO05D013824 6.0e-12 74.3 49 71.4
AUR62017136 Chenopodium quinoa HOM05D000435 ORTHO05D000430 3.0e-11 72.0 71 60.6
Nitab4.5_0002072g0130 Nicotiana tabacum HOM05D000435 ORTHO05D013824 8.7e-11 70.5 40 82.5
AUR62035671 Chenopodium quinoa HOM05D000435 ORTHO05D000430 1.5e-10 69.7 58 65.5
Oeu005470.2 Olea europaea HOM05D000435 ORTHO05D000430 1.5e-10 69.7 53 69.8
THA.LOC104815690 Tarenaya hassleriana HOM05D000435 ORTHO05D000430 1.9e-10 69.3 62 62.9
ECA236G1471 Erigeron canadensis HOM05D000435 ORTHO05D000430 2.5e-10 68.9 83 50.6
Actinidia03625 Actinidia chinensis HOM05D000435 ORTHO05D000430 3.3e-10 68.6 62 56.5
EL10Ac4g07534 Beta vulgaris HOM05D000435 ORTHO05D000430 4.3e-10 68.2 71 57.7
PSO541G1261 Papaver somniferum HOM05D000435 ORTHO05D000430 4.3e-10 68.2 76 52.6
PSO675G1718 Papaver somniferum HOM05D000435 ORTHO05D000430 4.3e-10 68.2 76 52.6
vmacro09627 Vaccinium macrocarpon HOM05D000435 ORTHO05D000430 5.6e-10 67.8 79 53.2
Aqoxy3G03979 Aquilegia oxysepala HOM05D000435 ORTHO05D000430 2.8e-09 65.5 71 47.9
CANSAT11G0821 Cannabis sativa HOM05D000435 ORTHO05D000430 3.6e-09 65.1 72 55.6
Ca_12447_v3 Cicer arietinum L. HOM05D000435 ORTHO05D000430 4.8e-09 64.7 68 57.4
Lsat_1_v5_gn_7_114141 Lactuca sativa HOM05D000435 ORTHO05D000430 1.8e-08 62.8 73 53.4
Nn2g15498 Nelumbo nucifera HOM05D000435 ORTHO05D000430 4.0e-08 61.6 71 49.3
Sed0013125 Sechium edule HOM05D000435 ORTHO05D000430 2.0e-07 59.3 71 47.9
Phvul.006G059212 Phaseolus vulgaris HOM05D000435 ORTHO05D000430 4.9e-06 54.7 68 47.1
Aa31LG8G420 Aethionema arabicum HOM05D000435 ORTHO05D000430 6.4e-06 54.3 66 50.0
VMungo0540G1677 Vigna mungo HOM05D003572 ORTHO05D004118 6.4e-06 54.3 68 45.6
FAN21G0356 Fragaria x ananassa HOM05D000435 ORTHO05D000430 8.4e-06 53.9 47 53.2


User provided reference genes

Program Settings